Clarias gariepinus (North African catfish): 128520628
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Entry
128520628 CDS
T10780
Symbol
irx2a
Name
(RefSeq) iroquois-class homeodomain protein IRX-2a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128520628 (irx2a)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
128520628 (irx2a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
128520628
NCBI-ProteinID:
XP_053350929
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Position
4:complement(2520654..2529778)
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AA seq
443 aa
AA seq
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MSYPQGYLYQPAPGSLALYPLRGEELELAARCSSSSSSSSSSSSSSSTGSAFTPYPASAA
FTASATGGFASALSYHTDPATGFPSYMASPYDPPPPAMAAPLGFPPYGSAGFPPPPYQLN
DPAYRKNATRDATSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK
KENKVTWGARAKSEDEDEEEGARAERKDEEEEDDDKHADNGDASAEDEGISLHVDSLTDH
SAESDGEKVLCRIDDFSCKPAPETKEKHSEIDLTSPHGGHGRLSPKPMTSSPLTGVEAPL
LDTHRDKNKSCADVQSQNTKPKLWSLAEIATSDPKQPLQSQNCPSGGGIWTSSQSGAAPS
ASILARPIYYTSPFYSNYANYGNFGQGILRYGSIHKHTPETAMLKANHANHIQAEQHFRA
LSTEAKKDSGDACTLGPHSYLSS
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatcctcagggttacctgtatcagcccgcaccgggctctctggctctctacccg
cttaggggtgaagagctcgagctggccgcgcgctgctcgtcttcttcctcctcgtcttcc
tcctcttcctcctcttcgtccacgggttctgccttcactccgtatcccgcgtccgccgcc
tttaccgcctccgccaccggcggcttcgccagcgcgctgagctaccacaccgacccggcc
accggcttcccctcctacatggcctccccgtatgacccccctcccccagccatggcggct
ccgctcggtttcccgccatacggcagtgcgggtttcccgccgcccccgtaccagctcaac
gaccctgcgtaccgcaagaacgccacgcgcgacgccacgagcacgctgaaggcctggttg
aacgagcaccggaagaacccgtacccgactaagggcgagaagatcatgctggccatcatc
actaagatgacgctcacgcaggtgtccacgtggttcgccaacgccaggcggagactcaag
aaggagaacaaagtgacgtggggcgcgcgcgccaagagcgaggacgaggatgaagaggaa
ggtgcgcgcgccgaacggaaagatgaggaggaagaggacgacgataagcacgcggacaac
ggagacgcgtccgccgaggatgagggcatcagcctacacgtggactctctgacggaccac
tcggccgagtcggacggagagaaagttctctgcaggatcgacgatttttcctgcaaacct
gctcctgaaacaaaagagaagcactctgagatcgacctgacttcgcctcacgggggtcac
ggacgtctgtcacccaaacccatgacctcatcacctctgactggggtggaggcgcctctc
ttggatacacatcgtgacaaaaacaagagctgtgctgatgtccagagccaaaacaccaag
cccaagctctggtcgttggcagaaattgccacttcagacccaaaacagccgctgcagagc
cagaactgcccctcagggggtgggatttggacctctagccaatcaggcgcagctccctcg
gcttccattttggccaggccgatttattacacatcgcctttttacagcaattacgccaat
tacggaaactttgggcaaggaatcctgcgctatggctcgatccataagcacacccctgag
acagcgatgctaaaggctaatcatgctaaccacatccaggcagagcagcacttcagagcc
ttgagcacggaggctaagaaagactctggtgatgcgtgcacgcttggacctcattcgtac
ctctcgagttaa
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