Clarias gariepinus (North African catfish): 128520826
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Entry
128520826 CDS
T10780
Symbol
pex5
Name
(RefSeq) peroxisomal biogenesis factor 5 isoform X1
KO
K13342
peroxin-5
Organism
cgar
Clarias gariepinus (North African catfish)
Pathway
cgar04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
128520826 (pex5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128520826 (pex5)
Membrane trafficking [BR:
cgar04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
128520826 (pex5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_17
TPR_16
TPR_8
TPR_14
TPR_19
TPR_CcmH_CycH
CFAP70_mid_TPR
TPR_12
TPR_20
TPR_Slam
RMD1-3
CFAP70_TPR_C
ANAPC3
TPR_9
TPR_10
Connexin50
CABIN1_N
MAS20
PEX18_PEX21_C
Motif
Other DBs
NCBI-GeneID:
128520826
NCBI-ProteinID:
XP_053351215
LinkDB
All DBs
Position
4:complement(13328679..13346561)
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AA seq
639 aa
AA seq
DB search
MAMRELVEAECGGANPLMKLTGHMTQEGGAWRHRSTPTIPPTPIEIATEEELVNEFLQAP
PRPPHSFDMGQLLEEMQQIDQQTYRQAPQRAPDVAALALSGDWAAEFLSGADSAVSPAQA
GFDAADADWTREFINEVADPGRWAEEYLEQSEEKLWLGDLGEKEQEREWTKEYQPGEDLK
QTANELLAKVDDPKLQNTEFLRFVRQIGEGSVTVEDRAGKQLADKAQAKEAQNWASSFTQ
VSESAESWVDEFTAAGPDFQQAKAAVESDIDFWEKLQEEWEEMAKRDAEAHPWLSDFDQL
LSNSYDKGYQFEEENPYLSHEDPLAEGVKRMEAGDIPGAVRLFESAVQREPDNQLAWQYL
GTCQAENEQEFAAISALRRCIELKKDNLTALMALAVSFTNESLHRQACETLRDWLRHNPK
YCHILEQRDRDKEREGVQEKEKERERFGSLLPEALFNEVQTLFLSAAAADPTRVDPQLQC
GLGVLFNLSGEYDKAVDCFSAALSVTPQDYLLWNKLGATLANGNRSEEAVAAYRRALELQ
PGFVRSRYNLGISCVNLGAHREAVEHFLEALSLQRQAAGVEGGASRAPGSATTIMSDNIW
STLRMALSMMGESSLYTAADRRDLDTLLAHFCQRDGETD
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcgggagctggtagaggcggaatgcgggggagccaatcccctcatgaaattg
actggtcacatgacccaagaaggcggggcttggagacacaggtcaactcccactatcccc
cccacgccgattgaaatagccacagaggaagagctggtgaatgagtttctacaggcgccc
ccacgccctcctcacagtttcgacatgggccagcttttagaagaaatgcagcaaattgac
cagcaaacctacagacaagccccacaaagagctccagacgtagctgcattggcactatcg
ggtgactgggcagcagagttcctgtctggcgctgactccgcagtctctcctgctcaggcg
ggttttgatgcagcagatgctgactggaccagagaattcatcaatgaagtggcagaccct
gggcgatgggcagaagaatatctggagcagtcggaggagaaactgtggttaggagatctg
ggcgagaaggagcaagagagagaatggacaaaagagtaccaaccaggggaggatctgaag
caaacagctaatgaacttcttgcaaaggtcgatgaccccaagctgcaaaacacagagttc
ctgcggtttgttaggcagattggcgagggcagtgtgactgtggaggacagagcaggaaag
cagctcgctgataaagcacaggccaaagaggcacagaactgggcgtccagcttcacgcag
gtatcagagtctgctgagtcctgggtggatgagttcaccgcggcgggacccgattttcag
caggcgaaagctgccgtggagagtgacatcgatttctgggaaaagctgcaggaggaatgg
gaggagatggctaagagagatgccgaggctcatccctggctttctgactttgaccagctg
ctcagcaactcatacgacaagggatatcaatttgaagaagaaaatccgtacctgtcccat
gaggacccgctggcagagggagtaaagaggatggaagctggggacattcccggggctgtg
cgtctcttcgaaagtgcagtgcagagagaaccagacaaccagctggcctggcagtatctg
ggaacatgccaagcagagaacgagcaagagtttgctgccatcagcgccctccgcaggtgt
attgagctgaagaaagacaatttgacagctctcatggctctagcggtcagcttcacaaac
gaatccctgcaccggcaggcctgtgaaacgcttcgtgattggctgcgacacaatccaaag
tactgtcatattcttgagcagagggacagggacaaagaaagggaaggagttcaagagaaa
gagaaggagagagagagatttggatcactgctgccagaggctctgtttaatgaggtgcag
acgttgtttttgagtgcggcggctgctgatcccacgcgagtagaccctcagctgcaatgt
ggtctcggagttcttttcaacttgagtggagagtatgacaaggctgtggactgtttttct
gctgccttgtctgttactccacaggattatttgctgtggaataagttgggagctactcta
gctaacggaaatcgctctgaagaggctgttgctgcctacagaagggcgcttgagctgcag
cctggctttgtgcgcagtcgctacaatctgggcattagctgtgttaatctgggagctcac
agggaagcggtggaacatttccttgaggcgctctctcttcagagacaagctgccggtgtg
gaaggaggtgcaagtcgggcaccaggctctgccactaccataatgtcggacaacatatgg
tccaccttgcgcatggcactgagcatgatgggagagagttcgttgtacactgctgctgac
cgccgagatctggacacgctcctggcacacttctgccagagggacggagagacagactga
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