Clarias gariepinus (North African catfish): 128520860
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Entry
128520860 CDS
T10780
Symbol
nop2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgar03009
]
128520860 (nop2)
Enzymes [BR:
cgar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
128520860 (nop2)
Ribosome biogenesis [BR:
cgar03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
128520860 (nop2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
PCMT
Methyltransf_31
FtsJ
Methyltransf_25
Motif
Other DBs
NCBI-GeneID:
128520860
NCBI-ProteinID:
XP_053351260
LinkDB
All DBs
Position
4:complement(19361658..19376000)
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AA seq
741 aa
AA seq
DB search
MGRKFDPTSKVKRGPGRKARKQKGAETELAKILVNEDEPKKLSSRGRKRAVKRAQGATDH
TEGKQPKKGFSDDNSKWLTPAQRKRKIDHSEGDEDSDSQWEEEEEDADEVEDIEKGGKVQ
LIADDDDDDDDDMVDDYGAMEDSSEGGEQEEEEAGSDGEELLPIERAARKQKKRQEPAAQ
ESEDDDEDDDEEEGEDEKLDDEQEEEEEDTVQAHIDNMDSFKLPGAKERENEGLLPLDLQ
SVHQRIKDNIDVLSHFSEKREEGRERSEYLSLLKSDLCTYYSYNAFLMGNLMDLFPHAEL
IDFLEANEVQRPITIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKVGLVIFDSSVPIGA
TPEYLAGHYMLQGASSLLPVMALSPQEGESVLDMSAAPGGKTTYMAQLMRNTGVIIANDA
SAERLKSVVGNIHRLGVTNTIICNYDGRQFPKVMGGFDRVLLDAPCSGTGVISKDPAVKT
SKDSGDILRSAHLQKELILAAIDSVNADSQTGGYLVYCTCSITVEENEWVVDYALKKRNV
KLVPTGLDFGKEGFTRFKERRFHPSLKLSRRFYPHSHNMDGFFVAKLKKFANTIPTASTE
ENEKASKAETPATSEDKNLKPESKQQSKGTQKAKQQTKQQSKATSTSKTESPTGKKKPVL
KGKKLKDEGPKKKRAKMDEQNSKEGKIKEKLKVLKVDKDETNEPVTKNAKESLLKKKTNK
NNQKNLFKRRKNKMGKNKFKK
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaagtttgatcccacctccaaagtgaagcgtggacctggacggaaagccagg
aaacagaaaggcgcagagaccgagctggccaagattttagtgaatgaggatgagcctaaa
aaactgtcgagtcgaggcaggaaacgtgctgtgaagagagcgcagggtgccactgatcac
acggaaggaaaacagcccaagaaaggattctctgatgacaacagcaaatggctgacacca
gcacagcgaaagcgcaaaattgaccattcagaaggggacgaggacagcgacagccagtgg
gaggaagaggaagaagatgctgatgaagtagaggatatcgagaaagggggaaaagtacaa
cttatagctgatgatgatgatgatgatgatgatgatatggtcgatgactatggagcgatg
gaagacagcagtgaaggaggagaacaggaggaggaggaggcgggcagtgatggagaggag
ctgctgcctattgaacgagctgccaggaaacagaaaaaacgccaggaacctgcagcacaa
gagagtgaagatgatgatgaggatgatgatgaggaggagggggaagatgaaaaactggat
gatgaacaggaggaggaagaggaggacacggtgcaggcgcatattgacaacatggacagc
tttaaactgcctggtgcaaaagagagggagaatgagggacttttgcctctagacctgcag
agcgtccaccagagaattaaagacaacatcgatgttctctcccacttcagtgagaagaga
gaggaggggagagagcgatcagagtatctctcgctgctgaagtcagacctttgcacatac
tacagctacaatgccttcctcatgggcaatctcatggatctgtttcctcacgctgagctc
atagattttctggaggccaatgaagttcaaaggcctatcaccatcaggactaacaccctt
aaaaccaggaggagagacctggcccaggctttgatcaacaggggtgtaaatctggatcct
ttggggaagtggtctaaagttggcctggtcatttttgattcctcagttcccataggtgca
actcctgagtatctagcagggcactacatgctgcagggagcctcttcactgctccctgta
atggcgctctctccccaggagggggagtctgtgctggacatgagtgcagctcctggtgga
aagaccacctatatggcccagctgatgagaaacacaggcgtgataattgctaacgatgcc
agtgctgagagactgaagagtgttgtgggaaacatccatcgcctgggagtcaccaacacc
atcatctgtaactatgatggcagacagtttcccaaggtgatgggcggttttgacagagtg
ctattggatgctccttgctcaggtacaggggtcatctccaaagatccagctgtgaaaaca
agcaaggacagcggtgatattctgcgctcggctcatctgcagaaagaactgattctggct
gctattgactctgtcaatgctgactcgcagacgggaggctatcttgtctactgcacctgc
tccattacggtggaagagaatgaatgggttgtggattatgccctaaagaagagaaatgta
aaactggttcccacaggattggactttggcaaagaaggcttcaccagatttaaagagcga
cgtttccacccttcacttaaactgtctcggaggttctacccgcattcccacaacatggat
ggcttcttcgtggccaagctgaaaaagtttgcaaacaccattcccactgcgtccacagaa
gagaatgaaaaggccagcaaggcagaaacacctgctacatcagaggacaaaaacttaaaa
cctgagtctaagcaacagagcaaaggtacacagaaagccaagcaacagaccaagcaacaa
tcaaaagctactagcaccagcaaaaccgaaagccccactggcaagaaaaagccagtgtta
aaaggtaaaaaattaaaagatgaaggtcctaaaaagaaacgggcaaaaatggatgaacag
aattcaaaggaaggaaagatcaaagaaaagcttaaagtcctaaaagtggacaaagacgaa
actaatgagcctgtgactaaaaatgcaaaggaaagcttacttaagaagaagacaaacaaa
aataatcagaagaacctctttaaaagaaggaagaataaaatggggaaaaataaatttaag
aaataa
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