Clarias gariepinus (North African catfish): 128520904
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Entry
128520904 CDS
T10780
Symbol
pou2f2a
Name
(RefSeq) POU domain, class 2, transcription factor 2 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128520904 (pou2f2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128520904 (pou2f2a)
03021 Transcription machinery [BR:
cgar03021
]
128520904 (pou2f2a)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
128520904 (pou2f2a)
Transcription machinery [BR:
cgar03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
128520904 (pou2f2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
128520904
NCBI-ProteinID:
XP_053351318
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All DBs
Position
4:11621574..11667862
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AA seq
609 aa
AA seq
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MFVPLPLPFVLPRTASELRAWRLKSPPAARALSDIRMSKPIEVENPAADSPMENTADSER
NGSDSSNQIPPMKISPFSLSPTLCASNKAKVEECGEMSPASVQATPTQTPLPHTQLMLTG
SQLAGDIQQLLQLQQLVLVPGHPLPSPAQFLLPQAQQGQQGLLQTPNLISLPQQNQGGLL
SAPPALGLQAQRDKVMESSVNTVTPVTSHAEEPSDLEELEQFARTFKQRRIKLGFTQGDV
GLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSMDSTLPSPSSLS
SPSLGFEGLPARRRKKRTSIETNVRVALERSFSTNQKPTSEEILLIAEQLNMEKEVIRVW
FCNRRQKEKRINPSSATPPLPSQPQPATHKPPCYSPHMMQGQGPSQPVTSLSTAATTMSS
VCPLTPTGPSSSSTPSPVTPSPRSDASPVPATHALNLNTGSWRNKNGDVSNYITDFAANL
RNTVIGVNTGMNQALRGSNPIATIQGLFETLAASGGQTTISSLEGGSKVLIGGSGGQRSG
LPSSLFLNHPSLLPMAAGTALGLGNSIVSKSGRPLFPDGMSPSPCSSPDSSCSSSDLLHS
PHDLGSGQD
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtccccctgccgctgccgttcgtcttgcccagaactgcctccgagctccgtgcc
tggcgcctcaagtctccgccggctgcgcgcgcgctctccgatatcagaatgtcaaagcca
atagaggttgaaaatccagcggctgactctccgatggagaacacggcagattcagagagg
aatggttcagactccagtaatcagattccaccaatgaaaatcagccccttctcactctct
ccaacactatgcgccagcaacaaggccaaggtggaggagtgtggagagatgtctccagct
tcagtccaggccacgcccactcaaacacccctcccacacacacagctgatgctgacagga
agccagctggcaggagacatccagcaattgttgcagctgcagcagttggtccttgtccca
gggcatcctttgccctcccctgcacagttccttttgccacaggcacagcaagggcagcaa
gggctgctacagacaccaaatttgatttcactacctcagcaaaaccaggggggtcttctc
agtgcgcctcctgcactcggcctacaagcacagagagacaaagttatggagagcagtgtc
aatacggtcacccctgtgacttctcatgccgaggaaccaagcgacctggaagagctcgaa
cagtttgcccgtacctttaaacagaggagaattaaacttgggttcacacagggtgatgtg
ggactggccatgggcaagctgtatggaaatgacttcagtcagaccaccatctcccgcttt
gaggccctcaatctcagctttaagaacatgtgcaagctcaaacctctgctggagaaatgg
ctcaatgatgccgagaccatgtcgatggacagtaccttaccaagtcccagctctctgtcc
tcaccatctttgggctttgaggggctgcctgcccgccgccgcaagaaacgcaccagcatc
gagaccaatgtgcgcgtggcgttggagcgcagcttcagtacgaaccagaagcctacctca
gaggagattctactcatcgctgagcagctcaacatggagaaggaggtgatccgcgtctgg
ttctgcaaccgtcgacagaaagagaaacgtattaacccctccagcgccacccctcccctg
cccagccaaccccagcctgccacacacaaacccccctgctacagcccgcacatgatgcaa
ggtcagggaccgtcccagccggttaccagtctcagcacagcagcaaccaccatgtcctca
gtttgtcccttgacccccactggtccctcctcgagctccactccttcaccagtgactccg
tctcctcgcagtgacgcaagccctgtacctgccactcacgcattaaatctgaacacaggt
tcgtggcgtaacaagaacggtgacgtgtctaactacatcaccgattttgctgcaaatctg
aggaatacggtgattggagttaacactggaatgaaccaagctctgcgtggcagcaaccca
atcgccacaattcaaggtttgttcgaaactctggcggccagtggtggtcaaaccaccatt
tccagtcttgaaggtggcagcaaggtgctgatcggtggttctggaggacaacggtcagga
ctcccttcttccctcttcctcaaccacccttcactgttgcccatggcagcgggcacagct
ctgggattgggcaactcgatcgtttccaaatccggcaggcctctattcccggacggcatg
agtccctccccttgctccagccctgattcttcctgctcttccagcgacctgctacacagc
ccgcatgatctggggagcggtcaagattga
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