Clarias gariepinus (North African catfish): 128520939
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Entry
128520939 CDS
T10780
Symbol
emg1
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03008
Ribosome biogenesis in eukaryotes
Brite
Enzymes [BR:
cgar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
128520939 (emg1)
Ribosome biogenesis [BR:
cgar03009
]
Eukaryotic type
90S particles
Other 90S particles
128520939 (emg1)
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Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
128520939
NCBI-ProteinID:
XP_053351374
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Position
4:complement(19381768..19387528)
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AA seq
252 aa
AA seq
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MTQNSCDTPSPQSKMAAHKSEKRGLEHLDEYEPKRARQPRNMHDKMMETRLVVILEGATL
ETVKVGKTFELLNCDQHKNIIIKSGRDPGNVRPDITHQSLLMLMDSPLNRAGLLQVYIHT
EKNALIEINPQTRIPRTFPRFCGLMVQLLHKLSVRAADGPQRLLRMIKNPVSDHLPAGCP
RYAMSFKAGDSVCPRTLVPKDGPAVVVIGAFAHGAVNVDYTEKTISISNYPLSAALTCSK
VCSAFEEVWGVL
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagaattcctgcgacacgccttcgcctcagagtaaaatggcagctcacaagagt
gagaagcgtggtctcgagcacttagacgaatatgaaccaaaaagagcgagacaaccacga
aatatgcacgacaaaatgatggagacccgactagttgtcattttggaaggagcgacgtta
gagactgtaaaggttggaaagacattcgagctgctgaactgcgaccaacacaagaatatt
atcataaagagtggaagggaccctggcaatgttcgcccagacatcactcatcagagtctg
cttatgttgatggacagcccactgaacagagcaggactgctgcaggtgtacatacatact
gagaagaatgctctgattgagataaatccacagacacgaattccccgcaccttccctcgc
ttttgtggactcatggtgcagctcctgcataagctgagtgtgagagcagctgatgggccg
cagcgcttgctgaggatgattaaaaacccagtttcagaccacttacctgcaggatgccca
cgctacgccatgtccttcaaagcaggagattcagtctgtcccagaaccctggtccctaag
gatggtcctgctgtggttgttattggagcatttgcacatggagcggtaaatgtggattat
acagagaagacgatttccatcagtaactatcctctgtctgcagctctcacatgttccaaa
gtgtgctctgcatttgaggaggtctggggggtgttgtga
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