Clarias gariepinus (North African catfish): 128521001
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Entry
128521001 CDS
T10780
Symbol
kcnn3
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2
KO
K04944
potassium intermediate/small conductance calcium-activated channel subfamily N member 3
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128521001 (kcnn3)
Ion channels [BR:
cgar04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
128521001 (kcnn3)
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Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
DUF6775
DUF7310
Motif
Other DBs
NCBI-GeneID:
128521001
NCBI-ProteinID:
XP_053351477
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Position
4:complement(9358728..9457164)
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AA seq
754 aa
AA seq
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MDPPPSLTLALLAGSVEEEDQHSPHPLSGISHTSISSNYPGSNHSNHTGGTSSLERLNGT
PSPTGPNLPPVSLPKLPLVTTPQLPAPIPNALHPTSTPLSSCLGSQHSLSGETSPIYNAL
FYSSHSPTGERERERDRGCKHRQASPLVHRRDSNPFTEIAMSSCKYTGGVMKPLSRLSAS
RRNLIESDSGSDSKEGGAATGHGAVPSSSSSTTAPQNPPEIIISSKEDPPYGHVYELESS
ANQMSIYHQNHTLSESRGTLGSGSNVRRGGAGGETGRTASKASKRKNQNIGYKLGHRRAL
FEKRKRLSDYALIFGMFGIVVMVIETELSWGVYSKSSMYSLALKCLISLSTIILLGLIIA
YHAREVQLFVIDNGADDWRIAMTMERVLLIALELLVSAVHPVPGDFKFVWRARLAFTYIP
SQAEADLDMVLSVPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKVHFNTRFVMKTLMT
ICPGTVLLVFSISLWIIAAWTVRVCERYHDAQDVTSNFLGAMWLISITFLSIGYGDMVPH
TYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVL
RETWLIYKHTKLMKKIDHSRVRKHQRKFLQAIHQLRSVKMEQRKLSDQANTLVDLSKMQS
VMYELMSELNDRSEDLERQMLSLEQRVEQLTAGFSALPAHLAATLNAQHAALIRLLQERD
AKTPSPTVPALITPTPSANNQASEESPNTSTSNC
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggatccgcctccctctttgaccttggcccttcttgctgggagtgtagaagaagaagat
cagcactctccccaccctttgagtggtatctcccacacgtccatttcaagcaactacccg
ggcagcaatcactccaaccacacgggtggaacaagcagcttggagcggctcaatggcaca
ccgtcaccgaccggcccaaaccttccgccggtctccttgcccaagcttccactggtgacg
acaccacagctgccagctccaatccccaatgcgctgcacccgaccagcacgccactctcg
tcctgcctgggcagccagcatagcctgagcggcgaaacatcacccatctacaacgccctc
ttttattcctcgcactcgccgacaggtgagcgggaaagggaacgggatcggggttgcaag
cacaggcaggccagtccgctggtgcaccgcagggacagtaaccccttcaccgagatcgcc
atgagctcatgcaagtacaccggtggcgtgatgaaacctctcagccgcctcagcgcctcc
cgcaggaacctcattgagtccgacagtggaagtgacagcaaagaaggtggtgctgccact
ggacatggggcggtgccgtcctcctcatcctcaactactgcaccccagaacccacctgag
attatcatctcctccaaagaggatccaccatatggacatgtctatgagcttgagtcatcg
gctaatcagatgtctatctatcaccagaaccacaccctctctgagagcaggggcactctg
ggaagtgggagcaacgtacggcggggtggggcaggtggagagactgggaggacagcctcc
aaagcttctaagcgcaagaaccagaatatcggctacaagcttggccaccggagggcgctg
ttcgagaagaggaagcgactcagtgactatgcgcttatctttggcatgtttggcatcgtc
gtcatggtgatcgagacagagctttcctggggcgtctatagcaagagctccatgtattcc
ctggcattaaaatgtcttatcagcctgtccaccatcatcctactcgggctcatcatcgct
taccatgcacgagaggtgcagctgttcgtcatcgataacggtgcagacgactggcgcatc
gccatgaccatggagcgagtactattgatcgcgctggagctgctggtctcagctgtgcac
ccagtgcccggagacttcaagtttgtttggcgcgctcgactcgcgttcacctacatcccc
tcgcaggcggaggccgacctggacatggtgctttccgtgcccatgttcctccgactctac
ctcatcgcccgtgttatgctcctccatagcaagctgttcaccgatgcctcctcccggagt
ataggggctctcaacaaggtgcactttaacacacggtttgtgatgaagacactgatgact
atctgcccaggcacagtgcttctggtcttcagcatctccctgtggatcatcgcagcctgg
actgtacgagtatgcgagaggtatcatgacgctcaggacgtgaccagcaatttcctggga
gccatgtggctcatctccatcaccttcctctccattggctatggagacatggtgcctcat
acctactgtggcaagggagtgtgtcttctgactggcattatgggggcaggctgtacagcg
ctggttgttgccgtggtagcaagaaagctggagctgaccaaggctgagaagcatgtgcac
aacttcatgatggatacacagctcacaaaacggataaagaacgcagctgccaacgttctc
cgagaaacatggctgatctacaaacacaccaagctgatgaagaagatcgaccattcgcgt
gtgcgcaagcaccaaaggaaattcctgcaagccatccaccaactgcgaagtgtaaaaatg
gagcaaagaaaactgagtgaccaggccaatacactagtagacctctcaaagatgcagagc
gtgatgtatgagctcatgtctgagctgaatgaccgcagtgaagatctggaacgccagatg
ttgagcctggagcagcgagtggagcagctcacggcaggtttcagcgctctgcccgctcac
ctggcagccacgctaaacgcccagcacgctgcgcttatccgcttactgcaggagagagac
gccaagacccccagccctaccgtgcccgccctcatcactcctacgcccagtgccaacaac
caggcctcagaggagagccccaacaccagtacatccaactgctga
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