Clarias gariepinus (North African catfish): 128523153
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Entry
128523153 CDS
T10780
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 4
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgar04515
]
128523153
04990 Domain-containing proteins not elsewhere classified [BR:
cgar04990
]
128523153
Cell adhesion molecules [BR:
cgar04515
]
Immunoglobulin superfamily
SALM family
128523153
Domain-containing proteins not elsewhere classified [BR:
cgar04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
128523153
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
ig
fn3
LRR_5
Ig_2
LRR_9
LRRCT
LRR_14
Motif
Other DBs
NCBI-GeneID:
128523153
NCBI-ProteinID:
XP_053351633
LinkDB
All DBs
Position
1:27297947..27324695
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AA seq
966 aa
AA seq
DB search
MQASPLPQSEKSHPSLILHHHSSKAPSSSLSFHPSTHSYTSILKPSPKLLPSDTPLCPKY
SCGFLAQSISSSSAPLPSLHWLTLVTCACLLPALIGRIPGALAGETWGVVSSCPFHCVCR
NLSESLSTLCADKGLLFVPPNIDRRTVELRLADNFIREVGGLDFVNMTGLVDLTLSRNTI
NYIKPMAFGDLESLRSLHLDGNRLSSLGPRDLVGMLNLQHLILNNNQLINISSDAFDDFL
LTLEDLDLSYNNLRKAPWEAIQNMASLHTLNLDHNLIDQIEEGSFGELYKLARLDMTSNR
LQTLPPDPLFARSQTGVISPTPYNSVISLNFGGNPLHCNCELLWLRRLIRTDDMETCATP
IHLAGRYFWSIPEEEFTCEPPLITRHTHKLWVLEGQKATLKCRAIGDPEPVVHWVSPDDR
IIANSSRTTSFRNGTLDFLVTVARDDGAYTCIAINAAGEATAVIDLKVIPLPHRGNGTVS
LARDPGSSDITRGKTANGQTPSQDTNTDPQEGKDEVEAEDGGNEGGEDQFVEVQGVTSTS
AQVRWDIGRLSGSYLVWMYQIQYNCTADETLVYRILPSTSNSFLLKNLVSGADYNLCVLA
IFDDTVTSMAATKILGCAQFSTKDNYPDCRSLQAHFLGGTLTILVGGIVVVTLLVFTVAL
MVRHRVCSNHSNHHGTGGDVGCSGSNSSPQGKGANVFSQRNSSGEVMMVVLPNGLPQKQR
SAGGGAESSLKGHSLTQKPQTLPKPKVNLEQLKTAVGSLKVLPPYTPEAERMPMYYTPKK
PSSSTLPRQSHQSEGGLTKLRSTNRDIEKQASFTLVSQSHSDRRFSTGGSLVVHRGGRDS
GCNLETTYQSSGLSVARHRRSSSFDMGNMAATTCYSYAKRLSVIWSKRSQSLHGMLAQCA
SANSISTTSSGSGDFHVRHARSAIHAYKSNTMPSRLARTHTEQSRDKGKEKVKAKEKGEE
LEESVV
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcctccccactccctcaatctgaaaaatcacacccatccctcattttacatcat
cattcaagtaaagcaccctcttcctctctttcttttcatccatcaacccattcttacacg
tccatcctcaaaccttcaccgaaactcctaccatcagatacacctttgtgtccaaaatac
agctgtgggtttctggcccaatccatatcatcctcaagtgcacctctaccctcactccac
tggttgaccctagtcacatgcgcctgtttgctacctgctttgattggacggattcctgga
gctctggctggggaaacgtggggtgtagtttcttcatgcccttttcactgtgtgtgccgg
aacctttcagagtctctgagcacactctgtgcagacaagggcctcctctttgttccacca
aacattgaccgcaggactgttgagcttcgccttgctgataacttcattagggaagtgggt
ggcttggactttgtcaacatgaccggattggtggatttaacactttcacgaaacaccatc
aactacatcaaacctatggcatttggagaccttgaaagtctccgctcattgcacttggat
ggaaatcgactgtcatcacttggtccgagagacctggtgggtatgttgaacctgcagcat
cttattctaaacaacaaccagctgatcaacatttcctcagatgcctttgatgattttctc
cttacactggaagacttagacctgtcttacaataacctgcgcaaagcaccatgggaagcc
atccagaacatggctagcttacatacactcaatcttgaccacaacctaattgaccagatt
gaagaaggttcctttggtgagctttataaacttgctcggttagacatgacttccaatcgc
cttcaaactctaccacctgaccccttgtttgcaagatctcagacaggtgtgatcagccct
acaccgtacaactcggtaatcagtttgaactttggaggaaaccctttgcactgtaactgt
gagctgctttggttacgtagattgattcgaactgatgacatggagacttgtgctactcca
attcaccttgctggacgttacttttggtcaatacctgaggaggaatttacctgtgagcct
cctcttatcactcggcatacacataaactctgggtcttagaaggacaaaaggccacactc
aaatgccgggctattggagacccagaaccagtggtgcattgggtctcgcctgatgatcgg
attattgctaactctagccgaaccacctcattccgtaatggaacccttgactttctagtg
actgtggctcgtgatgatggtgcttatacatgtattgcaatcaacgctgcaggtgaggcg
actgcggttattgacctcaaggtcattcctcttcctcaccgaggtaatggaactgtgtct
ttagcccgggacccagggtcatcagatattaccagaggaaaaacagccaatgggcagaca
cccagccaggacacaaacacagacccacaggaaggtaaagacgaggtagaagcagaggat
ggaggaaatgaaggaggagaggaccagtttgttgaagtacagggagtgacctcaacctca
gcacaagttcggtgggatataggcagactttcaggttcatacttggtttggatgtaccag
atacaatacaactgcactgcagatgaaactctggtgtaccgaattctgccttcaacaagt
aacagcttccttctgaagaatttggtttctggagcagactacaacctgtgcgttttggct
atttttgatgatacagtcacctccatggctgccacaaagattcttggatgtgcccaattc
agcaccaaggataattacccagactgccgttcactccaggctcactttctaggtggaaca
ttaaccatcctggtgggtggaattgttgtggttactctactggtgtttaccgtggcactt
atggtgcgtcaccgggtctgcagtaatcacagtaatcatcatggcactggtggagatgtt
ggatgttcaggatcgaattcctcacctcaggggaaaggagccaatgtcttttcacagaga
aatagcagcggggaggtaatgatggtggtcttacctaatgggttgcctcaaaaacaaaga
agtgcgggaggaggggcggagtcatcattaaaaggtcattctctcactcagaaaccccaa
acactgcctaagcccaaagtaaatctagagcagctaaaaacagcggtaggatcacttaaa
gtacttccgccttatactccggaggctgaaagaatgccaatgtactacacccccaagaaa
ccgtcctcatctacactgccacgccagtcgcatcagtcagaaggaggactgactaaactc
cgttccacaaacagggatatagaaaaacaggctagctttacccttgtctcccaatcacat
agtgatcggaggttcagcacaggagggtctcttgtagtccaccgaggaggcagagacagt
ggatgtaatttagagaccacctatcaaagctcaggcctaagtgtggcacggcacagacgt
agttcctcattcgacatgggcaacatggcggccacaacctgctatagttacgccaagcgg
ctgagtgtcatctggagcaaacggagccagtcactgcatggtatgttagcccagtgcgcc
tccgcgaacagcatctccaccaccagcagcggtagcggggatttccatgtgagacacgca
cgtagcgctatccacgcctacaaatccaacaccatgccttcacgcctagccaggacacat
acagagcaaagtagagacaaaggtaaggagaaagtaaaagcaaaagaaaaaggagaggaa
ctggaagaaagtgtagtgtag
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