Clarias gariepinus (North African catfish): 128523550
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Entry
128523550 CDS
T10780
Symbol
ssx2ipa
Name
(RefSeq) synovial sarcoma, X breakpoint 2 interacting protein a isoform X1
KO
K06085
synovial sarcoma, X breakpoint 2 interacting protein
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04517
IgSF CAM signaling
cgar04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128523550 (ssx2ipa)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
128523550 (ssx2ipa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128523550 (ssx2ipa)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
128523550 (ssx2ipa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADIP
Motif
Other DBs
NCBI-GeneID:
128523550
NCBI-ProteinID:
XP_053351666
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Position
1:530644..538374
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AA seq
555 aa
AA seq
DB search
MGDQWTPQTTVMMSDACLDPKDLSSISHINMSHHTHVHTLPSTHSYSVLSAFCTEDNVLQ
CVSYINQEASSLGLCGVCVDSRGGANALNAVPALNLLYELVQLHRKHLRALQDLEHRQLK
SCSDLEHLQHNNSRLKDQLEHTRRENSGLHEGERQLHLKIRTLQSCLKSEKEEVQKLQSI
IASRATQYNHDAKRKERECTKLKERLNQLLVDKRDKKLAIDVVNCVSRSDGKRGMWKTSR
MEARHEGEMYQALLRDYEVRQQTLMQENAELKTLLQHMKKDMMSILSPKTHCSRTEDSLD
QGNSEPEDECEELSKENLDQMCVDAREQLTNSIRLQWRRLKNHMHTLDTQVSQEEVISRR
DHEEAIQRIRVELQQCTEFIHTQQQLLQQLVSPCDEDTAALLSDGYTLEEKERLKDEWRI
FTEQKKNFERERKNFTEAAIRLGQERKVFEEDRAMWLKTQFLNMTPFIERKRPATSHSQS
SLNAEPEAKVLSTPSPSVRGLSQSGFFTANSASQGLPSTADLYRTLRLRPDARSFNRRSS
STETSSSDASAAHTH
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgggagatcaatggacaccacagacgaccgtgatgatgtcagacgcttgtctagaccca
aaggacctgtcaagcatttctcatatcaacatgtcccaccacacacacgtccacacactc
ccgtccacacactcctacagcgtgctgagcgctttctgtaccgaggacaacgtcctgcag
tgtgtctcttacattaaccaggaggccagctccctgggcctgtgcggtgtgtgtgtggac
tctaggggcggtgctaacgctctgaatgctgtccccgcccttaacctgctgtacgagctc
gtccagctgcacaggaaacatctgcgcgcactgcaggacctggaacaccgccaactgaag
agctgtagcgacctggagcacctgcagcacaacaactctcgcctcaaagaccagctggag
cacacgcgcagagagaactcgggtctccatgagggtgagcgtcagctgcacctgaagatc
aggacactgcagagctgtctgaagtctgagaaagaggaggtacagaagctccagagcatc
atcgctagccgcgccactcagtacaaccacgacgccaaacgcaaggagagggagtgcacc
aaactcaaggagcgtctcaaccagctgctggtggacaagagggacaaaaaactcgcgatc
gatgtggtgaactgtgtgagtcgctctgatggaaagagagggatgtggaagacgagcagg
atggaggcgagacacgagggtgagatgtaccaggcgctgctgagggactatgaggtcaga
cagcagactctgatgcaggagaacgctgagctgaagacgctgctgcagcacatgaagaag
gacatgatgtccatactcagcccaaagacacactgcagcaggacagaggacagcctggac
caggggaactctgagcccgaggacgagtgtgaggaattgagtaaagagaatctggatcag
atgtgtgtggacgcgcgcgagcagctgactaacagtatacggctgcagtggagacgactg
aagaaccacatgcacacactcgacacacaggtgtctcaggaggaagtcatctccaggagg
gaccatgaagaggccatacagcgcatcagagtggaactgcagcagtgtacagagtttata
cacacacaacaacagctacttcagcagctggtctccccgtgtgacgaggacacggcggct
ctgctgagtgatggatacacgctggaggagaaggagcggctgaaggacgagtggaggatc
ttcactgagcagaagaagaacttcgagagggagaggaagaacttcactgaggctgcaatc
cgtctggggcaagagaggaaggtgtttgaggaggatcgggccatgtggctgaagacgcag
ttcctcaacatgacgccgtttatagagcgcaaacgtcccgcgacctcccacagccaatca
tcactcaacgcagagcctgaagccaaagtgctgtccactccgtctccctcagtcaggggt
ttgtctcaatctgggttcttcaccgctaactccgcctctcagggattgccctccactgcc
gatctttaccgcacactacgacttcgtcctgatgccaggagtttcaaccgacgcagcagc
agcaccgagacctcatcgagtgacgcgtctgctgcacacacacactga
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