Clarias gariepinus (North African catfish): 128523669
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Entry
128523669 CDS
T10780
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03440
Homologous recombination
Brite
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
128523669 (bard1)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
128523669 (bard1)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
128523669 (bard1)
DNA repair and recombination proteins [BR:
cgar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
128523669 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128523669
NCBI-ProteinID:
XP_053351712
LinkDB
All DBs
Position
5:36528901..36559271
Genome browser
AA seq
724 aa
AA seq
DB search
MASDPKADSDTGMWVKTREAMAHFRKLLLCSKCSNILSEPVCLGACEHLLCRTCAGPSVG
DGCSVCHSPSWVKDVQINRQISNITQLFLQLESVICPSECSAPPADSLASSSEPSLPTKK
KNFKIWFSPKSRKVRCRVDNPADTDPPTRPRPDSNVLSVFNFTSSSQDSGSSTPPRSTGG
AERKRKKTKRKRVVRKQVRSSRIPSKQKKMRLEAVNQQWGFGKDDRIEHEDDPVKQNETR
SGKRVSFRCPNGNADQKEEVPQPEQQVLSPTRTRSILKDGVEKTLDQEHLRSSPKRSTPQ
SDESPHSTPKRPRLSPGRKVRKRSAGQSPDISRRRSVEERKDKGSPGSSPATGRTQTTPA
YMKRNHKGETPLHLAAIKGDVETTKALLEQGADPNLKDHAGWTPLHEACNLGHVGVVEVL
LQQGALINTPGYENDSPLHDAVRNGHAAVARLLLEHGASTTVLNIFGLRPVDYAATPEMR
EVLTLVPEAPQAVTTPVSSPANLSKSPALMKKDVQVTLIGTKLTTDQQNQLTKAARVLGG
KRVETFSSAVTHVVVPDGPLPSTLTVLQGILNGCWVLKFTWLAECLEQSRRIEESEYEAA
EGPQRARVNRVSLLPPLFDGCFFYLLGSFHKPPRDELVQLLRAGGGQLLSRQPKADSDVT
QTVMAAAYHAQPDSDQAFCTHYVLYDPQSSSRPGPVRLGKVWSAPLSWLLDCIRAFGLLP
VPEL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgatcctaaagcagactcagatacagggatgtgggttaaaactcgagaggcc
atggcgcatttccgaaagctacttttatgctctaaatgttctaacatcctgagtgagccg
gtgtgtctgggagcctgtgagcatctgctgtgcaggacgtgtgcaggtcctagtgtgggc
gacggctgcagtgtgtgtcacagtccctcctgggtgaaagacgtccaaatcaacagacag
atcagtaacataacgcagctcttcctgcagctagagtctgtaatctgtccctccgagtgc
tcagcgccacctgctgattctttggcgtcctcaagtgagccgtctctccccaccaagaaa
aagaacttcaagatctggttcagcccgaaaagccgtaaagtgcgctgtcgagtggacaac
ccagcggacactgacccgccaacgcgaccacggcctgactccaacgtgttatccgtcttc
aacttcacttcctcttcccaagattcaggctcctccacacctcccaggtcgactggaggc
gcagaacggaagaggaaaaagaccaaacgaaagcgcgtcgtcaggaaacaggtccgaagc
tccaggattccgagtaagcaaaaaaagatgaggctggaggccgtgaaccagcaatggggg
ttcgggaaagatgatcgaatagagcacgaggacgatccggtgaagcaaaacgagacgaga
agcgggaaaagggtgtcgtttcgttgtccgaacggtaatgctgatcaaaaagaggaggtt
cctcagccagagcaacaagtcctcagtccaaccaggacgaggagcatcttgaaggacggc
gttgagaagacgctcgatcaagagcatctccgttcttcaccgaaaagatccacgccacaa
agtgacgaaagcccacatagcaccccgaagcgtcccagattgtctccaggacggaaggtg
agaaaaaggagcgcgggtcagtctccagacatttccagaagaagatcagtagaggaaagg
aaagacaagggaagccctgggagctctcctgccaccgggaggacccagacaacccccgcg
tacatgaagaggaaccataaaggagagacgccgctgcacctcgccgcgattaagggtgac
gtggagacgaccaaagctctcctggagcagggagccgaccccaaccttaaggatcacgcc
ggctggactccactgcatgaggcatgtaacctgggccatgtgggtgtggtagaggtgctg
ctccagcagggggcgctgataaacacacccggctatgagaacgactctcctctacacgac
gctgtgaggaacggccacgccgctgtagccaggctgctgctggagcacggcgcctcgact
actgtactgaatatttttggccttcgtcctgttgattatgctgcgactccagaaatgcga
gaggtcctaacattggtccctgaggcaccccaagcggttaccactcctgtgagctctcca
gcaaatctgtcaaagtctccagcgctgatgaagaaggatgtccaggtcactctgatcggt
actaaactaacaacagatcagcagaaccagctgaccaaagcagcgcgagtcctgggagga
aagcgagtcgagactttctccagcgcagtcacacacgtggtagtgccggatggccccttg
ccctccactctcaccgtccttcagggaatcctcaacggctgctgggttctaaaattcaca
tggctggccgagtgtctggagcagagccgtcggatagaggagagcgagtacgaggcggcc
gagggtccacagagggctcgagtgaacagagtcagtctgcttcctcctctctttgacggc
tgcttcttctacctgctcggctctttccacaagcctccgagagacgagctggtgcagctg
ctgagggcaggaggaggccagctgctcagccggcagcccaaagcagacagcgacgtgact
cagacggtgatggcggcagcgtatcacgctcagccggactcggaccaggcgttctgcact
cactatgtcctgtatgacccgcagagctcgagcagacccgggccggtccgtctgggcaaa
gtgtggtcagcgccgttgtcgtggctgctggactgcatccgggccttcggcctgcttcct
gtgcctgagctctga
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