Clarias gariepinus (North African catfish): 128523690
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Entry
128523690 CDS
T10780
Symbol
zgc:101559
Name
(RefSeq) ras-related protein Rab-33B-like
KO
K07920
Ras-related protein Rab-33B
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128523690 (zgc:101559)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128523690 (zgc:101559)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128523690 (zgc:101559)
04031 GTP-binding proteins [BR:
cgar04031
]
128523690 (zgc:101559)
Membrane trafficking [BR:
cgar04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab GTPases
128523690 (zgc:101559)
Others
Specific organelles associated proteins
Auto phagosome
128523690 (zgc:101559)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
128523690 (zgc:101559)
GTP-binding proteins [BR:
cgar04031
]
Small (monomeric) G-proteins
Rab Family
Rab33
128523690 (zgc:101559)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
GTP_EFTU
G-alpha
SRPRB
ATP_bind_1
PduV-EutP
Septin
FeoB_N
TniB
AAA_22
AAA_14
DUF3713
Motif
Other DBs
NCBI-GeneID:
128523690
NCBI-ProteinID:
XP_053351746
LinkDB
All DBs
Position
5:22671200..22675662
Genome browser
AA seq
228 aa
AA seq
DB search
MAAENKNADSDSICDRDSLANYSFQDSFQTRVFKIIVIGDSNVGKTCLTYRFCEAKFLKN
PEATIGVDFREKTLELDGENIKLQIWDTAGQERFRKSMVEHYYRSVHAVIFVYDVSNLAS
FESLPEWIEECRHHSVPLNVPHILVGNKCDLGRGEVPTSLAQRLADSYNFPLFETSAKDP
AEKEHVDAIFLTLAHKLKNHKPLRLKQLSGITATPLTSEQEEKDLCFC
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgaaaacaaaaacgccgattcggattcaatctgtgacagagacagtcttgcg
aattattcgttccaggacagttttcagacaagggtatttaaaataattgtcatcggcgac
tcgaatgttgggaaaacgtgtttgacttataggttctgtgaagcgaaatttcttaaaaac
ccagaagccacaatcggagtggacttcagagaaaagacgctcgagctggatggagaaaac
atcaagttgcagatttgggacacagctggacaggagcgtttcagaaagagtatggtggaa
cattactaccgcagcgtgcatgctgtgatcttcgtatatgatgtaagcaaccttgcttct
tttgaaagtctgcccgagtggattgaagagtgtagacaccactcagtcccactgaatgtg
ccccacatcttagtagggaacaaatgtgacttaggaagaggagaggttcctacctcacta
gcccagcgactagctgatagctataatttcccactctttgagacgtctgccaaggaccct
gctgagaaggagcatgtggatgccattttcctcaccctagcccacaagctgaagaatcac
aagcctcttaggctgaaacagctgagtggaattactgcaacacctctgaccagcgagcag
gaagagaaggacctctgcttctgctga
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