Clarias gariepinus (North African catfish): 128523732
Help
Entry
128523732 CDS
T10780
Symbol
hnrnpa3
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A3 isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128523732 (hnrnpa3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgar03019
]
128523732 (hnrnpa3)
03041 Spliceosome [BR:
cgar03041
]
128523732 (hnrnpa3)
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
128523732 (hnrnpa3)
mRNA cycle factors
Common to processing body (P body) and stress granule
128523732 (hnrnpa3)
Spliceosome [BR:
cgar03041
]
Common components
Common spliceosomal components
hnRNP proteins
128523732 (hnrnpa3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_3
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
128523732
NCBI-ProteinID:
XP_053351811
LinkDB
All DBs
Position
5:25116279..25122529
Genome browser
AA seq
370 aa
AA seq
DB search
MEDKESKEPEQLRKLFIGGLSFETTEESLRAHFEQWGKLTDCVVMRDPGNKRSRGFGFVT
YSCVAEVDAAMAARPHKVDGRVVEPKRAVSREDSNKPGAHLTVKKIFVGGIKEDTEEYHI
RDYFEQHGKIESIDIMEERSSGKKRGFCFVTFDDHDTVDKIVAQKYHTINSHNCEVRKAL
PKQEMQAVSRYRGGGGGGNFMGRGGNFGGGNFGRGGYGGDRGGYGGDGYDGFGDGGNYGG
GPGYGGGRGGFGGGPGYGHQGGGGGGGGYGGGGYDNYDGRNFSGNFGGGGGNYNDFGSYG
GQQSNYGPMKGNNYGGRNSGGPYGGKHLYQTAPYSRMQYRRWIRMLGLSLFSGGYGSGGG
GGGNYGSRRY
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggaggataaagagagtaaagagcctgaacaactgaggaagctgtttattggtggttta
agctttgagacaacagaagaaagtttacgtgcccactttgagcaatggggaaagctcaca
gactgtgtggtgatgcgcgatccagggaacaagcgctcacggggttttggcttcgtaaca
tactcctgtgtagctgaggtggacgcagccatggcagctcgaccccataaagtggatggg
cgtgtcgtagagcctaaacgggcggtttcccgagaggactccaacaaaccaggggctcat
cttacagtgaaaaagatttttgttggtgggattaaggaggacactgaggagtatcacata
cgcgattactttgagcagcatgggaagattgagagcattgacattatggaggagcgatca
tcagggaaaaagagagggttttgttttgtaacttttgatgatcatgacactgtggataaa
attgtagctcaaaaataccacaccataaactcccataactgtgaagtcaggaaagcacta
cctaaacaggaaatgcaggcagtttctaggtatcgtggtggtggtggaggaggtaatttc
atggggagaggaggcaattttggaggtggcaactttggtagaggtggttatggaggtgac
agaggaggatatggcggagatggttatgatggatttggtgatggtgggaactacggcggg
ggcccaggttatggtggtgggcgtggaggatttgggggcggtcctggttacggtcaccag
ggaggagggggaggaggcggtggttatggaggaggaggatatgacaactacgatggacgc
aactttagcgggaattttggtggcggaggtggaaactacaatgactttgggagttatggg
gggcaacagtcaaactatggccctatgaaaggaaataactatggagggaggaactcaggt
ggaccatatggaggtaaacatttatatcagactgcaccatacagtcgaatgcaatatagg
aggtggattagaatgttggggctttctctattctcaggtggatatggctcagggggtggt
ggcggtggcaactatggttcaaggcgatattaa
DBGET
integrated database retrieval system
