Clarias gariepinus (North African catfish): 128523775
Help
Entry
128523775 CDS
T10780
Symbol
pgap1
Name
(RefSeq) GPI inositol-deacylase
KO
K05294
GPI inositol-deacylase [EC:3.-.-.-]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
cgar01100
Metabolic pathways
Module
cgar_M00983
GPI-anchor remodeling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
128523775 (pgap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128523775 (pgap1)
Membrane trafficking [BR:
cgar04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Post-GPI attachment to proteins factors (PGAP)
128523775 (pgap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PGAP1
PGAP1_3rd
PGAP1_TMD
Abhydrolase_6
Abhydrolase_1
bpX5
Hydrolase_4
Lipase_3
Palm_thioest
Motif
Other DBs
NCBI-GeneID:
128523775
NCBI-ProteinID:
XP_053351875
LinkDB
All DBs
Position
5:6659053..6680918
Genome browser
AA seq
941 aa
AA seq
DB search
MQALIYGFYVAALALLLTGLRELLFGFEENRCSMTYMFEHPEYRRVQLPRRVARQYPAYG
LYLYGEGLYAQETRNLKLSGAPVLFLPGNAGSYKQVRSLGSVALRKAEGLEGGIHLNVFT
IDFNEELVALYGGSLSRQTHFLYESIKVILQLYKNNPDPPSSVVLVGHSMGGVVARALFS
LPRFNPRLVSLILTQASPHQAPILSLDPFILDFYSSVRRRWSARAGSLRNVTVLSVGGGY
RDYQVRSGLTTLTCPVDDPNKMAVMVTAVPRTWVSTDHLSIVWCKELVLATVRAFFDLIE
PETGQFTKDTEKTMSVLNHHFIRHPVQLPGEPIDPAVSFLGPLDAWSEVNTLRLFYSAPK
EVRVQYFLFALSSRKEAYTHFYCRSNNLEMSSWLFGCTQMNGSVCVQAVDLSFRTELLPA
YKVLIVKLSELVAVSHLVLDASNPNARQFIVECEWQREESLIVSVPVPHVLSFGLTVSDV
TINSSGLQHTVQLQHFHQVYQAFRITVSSQCKIAKERQPSIYRLKVPWFREDSFVTAGIP
SATEISGMLHTNRQDNTSSALLQLHTAPNCQYKISVRASFPKVLGQILRFCGPVLPVYVA
VALLLALKRQLSAVLRTGRAVNARDTVANSLQLHKLEPPVLLLHLLLRLGWFQEGWSALG
LPAVDLLPLTPSEDVSHDVAGGLGQDWPRLVSPLLCILGAAVAFWGSAVLSMSLRALSLL
LAPLHRPSVSRHCGTLYPHAQILLILGLSALGGVTCGALSVTISFLLYLYRVLRLHMTER
YLSHMMNLAPQSMQQNTENGCSTSEIQKKLNKCNGTPLLSESALQEVRDDLQLHLNVSAV
LTLPVILCAPSLIYWSKNIRYSTRLDPDPFWPQTVPLLIATVLLVNCNTLRLSHSKLMLW
PTSRVLLPLSVAMLTFSTLHLYRVTHFLSAALTLLAASCYL
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgcttatttacgggttctacgtggcggctctcgcgctgctgttgaccgggttg
cgcgagctgctgtttggcttcgaggagaaccggtgcagcatgacctacatgttcgagcat
cccgaataccggcgtgtccagcttccacggcgtgtagcccgtcagtaccctgcctatgga
ctctacctatacggtgaaggtctgtacgctcaagaaacacgaaatctcaaactcagcggt
gctcctgtgctctttttacctggaaatgctggcagctacaagcaagttcgttccctggga
tccgtggcgttaaggaaagctgagggcttagagggaggaatccacctgaacgtcttcacc
atcgacttcaacgaggagctggtggctctttacggtggaagcctgagtcggcaaactcat
tttctctatgagagcatcaaggtcatcctgcagctttacaagaacaatccagatcctccg
agcagcgtggtgttggtgggtcactctatgggtggtgtggtcgcacgggctctgttctct
ctccctcgctttaatcctcgtctggtcagcctcatcctcacccaggcctctcctcaccag
gcacctattctctccttggatcccttcatactcgatttctactcgtccgtcaggaggcgc
tggagtgcccgagcagggagtttgcgtaatgtgaccgtcttgtctgtgggaggtggatac
cgggactatcaggttcgatcaggcctgaccaccttgacctgccctgtagacgacccgaac
aagatggccgtcatggtgactgctgttcccaggacgtgggtgtctactgatcacctgtcc
atcgtctggtgtaaggagttggtactggccacagtgcgggcattctttgacctcattgaa
cctgaaacagggcagttcacaaaggacactgagaaaacgatgtctgtactgaatcatcac
ttcattcggcacccggtgcagctccctggcgagccaatcgaccccgcagtcagcttttta
ggccccctagatgcctggagtgaagtaaacacacttcgtctgttctacagcgctcccaag
gaagttcgagttcagtacttcctgtttgcgctttccagccgaaaggaagcctacacgcat
ttctactgccgcagcaacaacctggaaatgtccagctggctgtttggctgcacgcagatg
aacggatctgtttgtgttcaagcagtggatttgtccttcagaacagaacttcttccagct
tataaggttctaattgtgaaattgagtgagctggtcgccgtctctcatctggtcctcgat
gcctcaaaccccaatgcgcgacagtttatagtggagtgcgagtggcagagggaggaaagc
ctgatcgtctccgtccccgtccctcatgtcctgtcttttggtttgacagtaagcgatgtc
accattaactcctctgggctgcaacacactgtacaactgcagcactttcaccaggtttat
caggcctttaggatcacagtgagcagccagtgcaagatcgccaaagaaagacagcctagt
atctacagattgaaggtgccatggtttcgggaagattccttcgtcacagcaggaattcct
tcagccacagagattagtggcatgctccacacaaaccgccaagataacacctcaagtgcc
ctcctacagctccacactgcccctaactgccagtacaagatctcggtgcgcgcctccttc
cctaaagtgctcggacagatcctgcgtttctgtggacctgtgcttcccgtgtacgtggct
gtggcgctcctgctcgctttaaagaggcagctgtctgccgtcctgcgaacgggtcgagct
gttaatgccagagacacagtggctaatagtttacagctacataaactcgagcctcctgtc
ctgctgctgcacctgctcctcagactgggctggtttcaggaaggctggtctgctcttggt
ctccctgcagtggatctcttgcctctgaccccatcggaagacgtgtcccatgatgtagcg
ggggggcttggccaggactggccccgtcttgtttcaccactgctgtgcattctgggtgct
gcagtggctttttggggaagtgctgttctcagcatgtctttacgtgccctgtctctcctc
ttggctccactgcacaggccttcagtctctcgtcactgtggcaccctttatcctcatgct
cagatcctcctcatcctcggtctgagcgcgcttggcggagtcacgtgtggagctctttca
gtcaccatcagctttctgctctatctctaccgagtcctccgattacatatgacggagaga
tatttaagtcacatgatgaacctggcaccacaaagtatgcagcagaacacagagaacggc
tgcagcactagtgaaatccagaagaagctcaacaaatgtaatggcaccccgctcttatca
gagtccgcactacaggaggtcagagacgacctgcagcttcacctgaacgtgtctgcggta
cttactctacctgtgatactctgcgctccctcgctcatctactggagtaaaaacatcaga
tattctactcgtttggatccggacccattctggccacagacggtacctctgctcatcgca
accgtgctactcgtaaactgcaacacactccgactgagccacagtaagctgatgctgtgg
cccacttcgcgcgtgttacttcctctcagtgtagccatgttgacattttctacgcttcat
ctatatcgggtcactcacttcctgtccgctgctctgacgctgctggcggcttcctgttac
ctttga
DBGET
integrated database retrieval system
