Clarias gariepinus (North African catfish): 128523819
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Entry
128523819 CDS
T10780
Symbol
hdac4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
128523819 (hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128523819 (hdac4)
Enzymes [BR:
cgar01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
128523819 (hdac4)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
128523819 (hdac4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
128523819
NCBI-ProteinID:
XP_053351938
LinkDB
All DBs
Position
5:complement(29824715..30013316)
Genome browser
AA seq
1043 aa
AA seq
DB search
MSSHSHPDSLPSKEQPLELLKTSGLNHIPSVDVSAVLPVPVPPAAIPMDLRVDQQHMPVS
GEQQLQQELLALKQKQQIQRQLLIAEFQRQHEQLSRQHEAQMQEHIKHQQELLAMKHQQE
LLEHQRKLEQHRREQELEKQQREQKLQLLKNKERGQESAVASTEVKMRLQEFVLNKKKAL
AQRSLNHCMPNDPRYSYWKTQHSSLDQSSPPQTGMSTYNHPVLGLYDSKDDFPLRKTASE
PNLKLRSRLKQKVTERRSSPLLRRRDGPVTTAKKRSLDVTESACNSAPGSGPSSPNNSSN
NITNENGITSSISNNPVEPFLAHRLASREGPVSQLSLYTSPSLPNITLGLPATGSTTVAS
GQQDGERLAIAGLQPGLPITTPFIAGAHLPSYLAASALEREGGSAHNPLLQHMALLEQTQ
ISGLSGLPLQSPSIHKLRPHRPLGRTQSAPLPQNTQALQQLVVQQQHQQFLVKQKQHFQQ
QQLHISKIMATKPNEPGRQHESHPEETEEELREHQALNDPTEGLPRGVTIKQEPPDQLEE
ELQQRERQAEHELIFRQQALLLEQQRIHQLRNYQASMEAAGLSVTLPGHRPLSRAQSSPA
SASFPIVVQEPPAKPRFTTGLVYDTLMQKHQCMCGNTNTHPEHAGRIQSIWSRLQETGLR
SKCECIRGRKATLEELQTVHSEAHVLLYGTNPLRQKLDSSVTPMFVRLPCGGIGVDSDTI
WNEVHSSSAARLAVGSVVELVFKVASGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIA
AKLLQQRLNVSKILIVDWDVHHGNGTQQAFYSDPNVLYLSLHRYDDGNFFPGSGAPDEVG
SGPGMGFNVNMAFTGGLEPPMGDVEYLAAFRTIVMPIANEFAPDVVLVSSGFDAVEGHPP
PLGGYRLTAKCFGYLTKQLMGLAGGRLVLALEGGHDLTAICDASEACVSALLGNELEPLP
EKVLQQRPNLNAVRSMEKVVEAHSKYWRCLQRNVSTLGYSLIEAQKCETEEAETVTAMAS
LSVATTNMGKRSEEEPMEEEPPL
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgagttcccacagtcacccagatagccttcccagtaaagagcagcctctggagcttctc
aaaacatctggactcaaccacattccctctgttgatgtgagtgcggtgttgcccgttccc
gttccccccgctgccatcccgatggatctgcgtgtggaccagcagcacatgcccgtgtct
ggggagcagcagctgcagcaggagctcctggcgctaaagcagaagcagcagatccagagg
cagctgctcatcgccgagttccagcggcagcacgaacagctctcgcgccagcacgaagcc
cagatgcaggaacacattaagcatcagcaagagctgttggcgatgaagcatcagcaggag
ctgctggagcaccagaggaagttggagcagcatcgtcgtgagcaggagctggagaaacag
cagcgtgagcagaaactgcagctgctcaaaaacaaggagcgtggccaagagagtgcggtg
gccagcacggaggtgaagatgcgtcttcaggagtttgtgctgaacaagaagaaagcactg
gcccagaggagcctcaaccactgtatgcccaatgacccacgatactcatactggaaaacc
cagcacagttcactggatcagagctctcctcctcagacagggatgtccacttacaaccac
ccagtactgggactctacgattccaaagacgactttccactccgcaagacagcgtcagag
ccgaatctgaagctgcgctccaggctgaagcagaaggtgacggagcggcggagcagcccg
ctgctgaggaggagggacggcccagtgactacggccaagaaacgctccctggacgtgaca
gaatcagcttgtaacagcgcaccagggtctggcccgagctcacccaacaacagctcgaac
aacatcactaacgagaacggcatcaccagctcaatctccaacaatccagtggagcctttc
ctggcacatcgtcttgccagcagagagggtcctgttagccagctgtctctgtacacatcc
ccctccctcccaaacatcactctgggcttgccagccaccggctccaccactgtggcgtct
ggccagcaggatggtgagcgcctggcgatagcaggcctgcagcccggactacccataacc
actccgttcatcgctggagcccacctcccctcatacctggctgcctcggccttggagcgg
gaaggaggctccgcccacaaccccttgctgcagcacatggccctgctggagcagacacag
atttcaggtctgagcggtctgccccttcagtctccctccatccataagctgcgtcctcac
cggccgctgggtcgaacccagtcagctcctctgccccagaacacccaggccctgcagcag
ctagtggtccagcagcagcaccagcagttcctggtcaaacagaaacagcacttccaacag
cagcagctccacatcagcaagatcatggccactaaaccaaacgagccaggcaggcagcat
gaaagccacccggaggagaccgaggaggagctgagggagcatcaggccctgaacgacccg
actgaaggcctgccgcgtggagtcaccatcaaacaggagcctcctgaccagctggaggag
gagctgcagcagcgggagcgacaggcagagcacgagctcatcttcagacagcaggctctg
cttctggagcagcagaggatccatcagctaagaaactaccaggcatcgatggaggcagcc
ggcctctccgtcactttaccggggcaccgtcctctgtccagagctcagtcctctccagcc
tctgcctcattcccgattgtcgtgcaggagcctccagccaagccgcgcttcaccaccggg
ctggtgtatgacacactgatgcagaagcaccagtgtatgtgtggcaacactaacacccat
ccagagcacgcgggacgaatccagagtatctggtccagactgcaggagactggactgcgc
agcaagtgtgagtgtatccggggcaggaaggccacgctcgaggagctgcagacggtccac
tctgaagctcatgtgctgctctacgggaccaacccactgagacagaaactagacagctct
gtgacacccatgtttgtgaggttgccctgtgggggcatcggggtggacagcgacactatc
tggaacgaggtacactcatctagcgcggctcgtctggccgtcggctccgtggtggaactg
gtgtttaaagttgcgtctggagaactaaagaacggtttcgctgtggtgcggcctccagga
caccacgccgaggagagcacccccatgggattctgttatttcaactcggtggccatcgca
gccaaactcctccagcagcgcctgaatgtcagcaagattttaatagtggactgggatgtc
caccatggcaacggcacccagcaggctttctacagcgaccccaatgtgctgtatctgtct
ctgcatcgctatgacgacgggaacttctttcctggcagcggcgctcctgatgaggtgggc
tcggggcctggcatgggctttaatgtgaacatggccttcacaggtggtctggagcctcca
atgggagacgtggaatatctggccgccttcagaacaatagtgatgccgattgcgaacgag
tttgcgcctgatgtggtcctggtgtcgtcagggttcgatgctgtggagggccacccgcca
ccgctggggggatatagactcacagccaagtgttttgggtacctgaccaagcagctgatg
ggcctggccggcggccgcctggtgctcgccctcgaggggggtcacgacctcactgccatc
tgcgatgcgtctgaagcatgtgtttctgctttgctaggaaacgagctggaaccactacct
gagaaggttcttcaacaaaggcccaatctcaacgctgtgcgctccatggagaaggttgtg
gaagcgcatagtaagtactggcgctgtctgcaacgcaacgtttcgacactaggctactct
ttgattgaggctcagaagtgtgagacggaggaggctgagactgtgaccgccatggcctcg
ttgtctgtagccaccacgaacatggggaaaaggtctgaagaggagccaatggaggaagaa
ccaccactgtag
DBGET
integrated database retrieval system
