Clarias gariepinus (North African catfish): 128523845
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Entry
128523845 CDS
T10780
Symbol
als2a
Name
(RefSeq) alsin
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128523845 (als2a)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
128523845 (als2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DH_Alsin
WD40_RLD
RCC1
MORN
RCC1_2
VPS9
PH_alsin
Alsin_RLD
HA_Alsin
PH
RhoGEF
Motif
Other DBs
NCBI-GeneID:
128523845
NCBI-ProteinID:
XP_053351969
LinkDB
All DBs
Position
5:27650547..27676006
Genome browser
AA seq
1687 aa
AA seq
DB search
MKVTSVCEDAAGEETLMEGQKGSEEEEGLHNRGEPHKWQGYSCTVKPVSIFLPQPVLQAA
LGISHGVLLTKDGLVYSFGELPWKCDVKSQTVEPVLESSLNGHRVVRVSAGSFHCGAVTD
KGIVHMWGENSHGQCGILGLDVVANPTPINIVDNETVPTEQVQIHDVACGAQHTLALSSK
HEVWAWGFGCQLGLVTTVFPVWKAQKVEHLSGRYVVQIACGEFHSLALVHSVPRSESSQQ
SLEKCGHCKQPLYTMIDKDDHVIISDTHYCPLGVELSYSKQGKTSKQETPGSTPNMVTTE
NDPQSCVAMSTDFCLSESALDKSHSNGTAGEKDVDHNDPATEIFPNSSESPQECRPRTTS
SLYPDEQALKDYLKRISEQSQSEQFEGKKGSRPPSRQISLKDSHNVEENNKPTFPLLSPQ
TMTDDIKSTFLDDIPLIKLQGSVTGCVDDDSSEDILIPSDPLNCNNCEEVFEENSLTDKN
HCPHEPLEAKKSASLTDVRVEDMDGYSRRRSLPGLLSPVSPSVLLRCNLAKAGAINSTTV
GISSKDSLLPSLNTEVWTWGRGHEGQLGHGDTLPRLQPLCIKSLSNKKVIKIVAGSSHSL
ALTAQCEAYSWGCNKLGQLGHMNSLSTVPQHVKMADGIRVWDIAAGQTHTVLLADGDCLQ
PILYYSGEQVQARVDSSPATYTQTPTLLPFFMNIGYVSSVFAGGPNCLALADRNVMGFIA
TLHEMASAERKFYCMLSMMKNQILHPLLGRDSMTICLGRTSMQLFQTMAGKYNRLCNLIG
QHATALTNFLQHRKDVKTLAILKNAALFHNTYKKYISSVGNFLVMGGFQSLVKPSQECLG
KKLELVQKLLDLKQKSVPPSDLLVNLFYMPLQHLHDYSSLLLKLATCFDVNSDEYQMIQD
GCLQYEVLAQLLSKQRKEAESTYTFWKSFSGKSSESLRKPSRRLVCESSNKGLTLQNAGR
FSVNWFILFNDALVHAQGTIPSKKFSIYLLATLWVEPISDDNTGLLGLKLTTPEENFTLL
ASSALEKAKWLKAINQAVEVGLKVGEDRQSFSLIGSQGAEPPISRTATYTFTKEGRLKDV
TYTGRWLSGKPHGSGTLKWPDGRVYCGTFKNGLEDGFGDCVMPNMSFNKYDRYKGHWKEG
KMHGFGTYRYATGEVYEGSFQENLRHGHGMLSSGRLASSSSSVFVGQWVHDKKSGYGIFD
NITKGEKYMGMWVDDQRQGSGVVVTQFGLYYEGEFNHNKMMGTGLLLCDDDTSFEGDFSE
DWTLNGKGVLSIPNGDSFDGIFVGEWGSELKVAGTFTKLCLYETEKTETKTFKVSHYAVP
ADQKWVAVFDECWSQLGCETPGVGENSRAWENIAVILTTSRRQQKDGPETLSRSQCKMLE
SLEVIPQHVGPVTAENYDIIRRYLIKACDTPLHPLGWLLETLVTVYRMTYVGVGSYRRLL
KQAVEEIQSYLTRIFQIVRFLFPGLPEEGGFIPDSERRASDFLSSSSTSSDTSQQGWIVS
STSLVLPVLLPRLYPPLFTLYTHEREREEEVYWECVLRLNKQPDLSLLTFLGVPQKFWPA
SISVLGEIKNVLPSSMNACFATAVETLQQISMTFTPADKLQVIQLTFEDITQEVQTMLGQ
GFLWCMDDLFPVFLYVVVRARIRNLGSEVSLIEDLMDPALQHGELGLMFTTLKACYYQIQ
REKPTGM
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcacaagtgtgtgtgaggatgccgctggagaggaaacactgatggaaggccag
aagggttctgaagaagaggagggcttacacaacaggggtgagccacacaagtggcagggt
tactcatgtactgttaaaccagtgagcattttccttccacagcctgttcttcaggctgca
ctgggcatcagccatggagttcttctgacaaaagatggccttgtctacagctttggcgag
cttccatggaagtgtgacgtaaaatcccagacagtcgaacctgtgctggaaagctcatta
aatggccaccgtgtggtccgtgtgtctgcaggtagttttcactgtggtgctgtaacagat
aaaggaatagtgcacatgtggggggagaactcgcatggtcagtgtggtatcttaggtctt
gatgttgtcgccaatcctacccctatcaacatcgtggataatgaaactgttcctactgaa
caggtccagatccatgatgtggcctgtggggcgcagcacacgttagctctgtcatctaag
catgaggtgtgggcctggggttttggctgccagttgggcctggtgaccactgtgtttccg
gtgtggaaggcgcaaaaagttgagcatctatcagggaggtatgtggtccagattgcttgc
ggcgagttccacagcttggctttggttcactcagtacctcgttcagagtcttctcaacaa
tccctggaaaaatgtggtcactgcaagcagcccctttacactatgattgacaaggatgac
catgttattatttctgacacccattactgcccgctaggggtggaactatcatattcaaag
caaggtaaaacatcaaagcaggaaactccaggctcgacaccaaacatggtaaccacagaa
aatgacccccagagttgtgttgctatgtctacagatttctgcctcagtgagagcgctctg
gataaatctcacagtaacggaacagcaggtgaaaaggacgtggatcacaatgatccagcc
accgagatttttcctaacagttcagaaagtccacaggagtgtcgtccaagaacgacgagc
tctctttaccctgatgaacaggctctaaaagactatctcaagagaatctctgagcagtcc
cagtcagagcagtttgaagggaagaaaggttcacgccctccaagccgtcagatatcactc
aaggattctcataatgtggaagaaaataacaaacctacatttcctttattgtcaccacaa
accatgactgatgatattaaatccacatttttagatgatattccactgataaagttacaa
ggctcggtcacaggttgtgtcgatgatgactcgtctgaagacatcctcattcctagtgac
cctttaaactgtaataactgtgaggaggtctttgaggaaaactccttgactgataaaaac
cactgtccacatgagccactggaggccaagaagagtgccagcctgacagacgttagggtt
gaagatatggatggctatagtcggagaagatcgttacctggcttactgtcaccagtttct
ccatcagtattgcttaggtgcaaccttgccaaagccggggccatcaactcaacaactgta
ggcatctcaagcaaagatagtctccttccatctctaaatacagaggtgtggacttggggc
agaggtcatgaaggtcaattaggtcatggagacaccttgcccaggttacagccactatgc
attaagagcttaagcaacaagaaagttatcaagatcgttgctggatcttctcattctttg
gccttaacagctcagtgtgaggcatattcttggggttgcaataaattaggtcagttgggt
cacatgaactctcttagcactgtaccacagcatgtgaagatggctgatggtatccgcgtg
tgggacattgcagcaggtcagacacacactgtgctgctggctgatggagactgcttgcag
cccatattgtattatagtggtgagcaagtgcaagcacgcgtggactcttctcctgcaacc
tatacacagacaccaactcttctccccttcttcatgaatatcggctatgtgagcagcgtt
ttcgcagggggaccgaactgtttggctctggctgatcggaatgtgatgggttttatcgcc
acgctgcacgagatggcatcagcagaaagaaagttctactgcatgctgagcatgatgaag
aaccagatactgcatcccctactgggccgggacagcatgaccatttgcttgggcaggacc
tccatgcagctgtttcagaccatggcaggaaaatacaatcgtttgtgcaatttaatagga
cagcacgctactgctctcacaaacttcctgcagcacagaaaagatgtgaaaactctggcc
attttaaaaaatgcagctcttttccacaacacctataagaagtacattagctctgtagga
aacttccttgtcatgggaggattccaatcactggtgaaaccctcacaagaatgcttgggg
aagaagctggaactggtacagaaactgttggacctcaaacagaaaagcgtcccaccgagt
gacttgctagtaaacttgttttacatgccgctgcagcacctgcatgactacagcagtctt
ctcctgaagctggccacttgttttgatgtgaactctgatgaataccaaatgattcaagat
ggctgcttgcaatatgaggtcttggcccaacttctaagcaaacagaggaaagaggcagag
agcacgtacacattctggaagagcttttcaggaaagagctcagagtctctacggaagcct
tctcggcgactggtatgtgagagtagcaataagggcttgaccctccagaatgcagggagg
ttctcggtcaactggttcatcctcttcaatgatgcccttgttcatgcacagggtaccatt
ccatctaagaagttttcgatctatctgctggccacgctctgggtggaacccatctcagac
gacaatactggattgttgggactgaagctaactacccctgaagaaaacttcactttgttg
gcatcttcagctctggagaaggcaaaatggttaaaggccattaaccaggctgtggaagtt
gggctcaaagtgggtgaagacagacagtcatttagtttgattggcagtcagggggcagag
cctcctatttcccgcactgccacttatacatttactaaagagggcagactaaaagatgtc
acatacactggacgctggctttcaggcaagccgcatggcagtggcaccctgaagtggcct
gacggcagagtttactgtgggacatttaaaaacggcctagaagatgggtttggcgactgt
gtgatgcctaacatgtctttcaacaagtatgatcgttacaagggccactggaaagagggc
aaaatgcatgggttcgggacataccggtatgctacaggcgaggtatatgaaggctcattt
caggagaacctgcgccatggccatggcatgctgagcagtggcagactggcatcgtcttct
agcagtgtgtttgttggccagtgggtccatgacaagaaatctggatatggaatattcgac
aacatcacaaaaggagaaaaatacatggggatgtgggtggatgaccaaaggcagggctct
ggggttgtggtcacccagtttgggttatattatgaaggggaatttaaccataacaaaatg
atggggactgggcttctgctgtgtgatgatgacacttcatttgagggagatttctcagaa
gactggacattgaatggaaagggtgtcttgtccatacctaacggagactctttcgatggt
atctttgtgggcgagtggggctctgaactgaaagtggctggcacctttacaaagctgtgc
ctatatgagacggagaagacggaaactaaaacctttaaggtcagtcattatgcagtacct
gctgatcagaaatgggtggctgtgtttgacgaatgctggagccagctgggttgtgaaacc
ccaggagtgggagaaaacagcagagcctgggagaacatcgcagtcatactgacaactagc
cgcagacagcagaaggatggtccagagactctgagtcgctcccagtgtaagatgctggaa
agcctggaggtaatccctcaacatgtcggtcctgttactgccgaaaactatgacatcatt
cgccgctacctaatcaaggcatgtgatactcctcttcatcccctgggctggctgctggag
acactggtcaccgtgtaccggatgacatatgtgggcgtgggctcttacaggaggctttta
aagcaggctgtggaggagatccagtcctacctcacacgcatctttcagatagtcaggttt
ttgtttcctggtcttccagaagagggtggctttattcctgattcagagaggagagccagt
gactttttgagcagcagcagcacaagttcagacacctcccagcaaggctggattgtgagt
agcacttctttggtgcttcctgtgttgttgcctcgtctctatcctcctctcttcactctg
tacacacatgagagagagagggaggaggaggtgtactgggagtgtgtgttacgcctcaac
aaacagcctgacttgtctctgctcacctttctgggagtgcctcaaaaattctggccagcc
tctatttctgttttaggagagataaagaatgtgctgcctagcagtatgaatgcttgcttt
gctactgctgtggagactctgcaacagatcagcatgactttcactcctgcagataaactt
caggtcattcagctgacctttgaggacatcacacaggaagtgcaaaccatgttgggccag
ggcttcctgtggtgcatggatgatctcttcccagtcttcctctacgtagttgtccgtgca
cgaatcagaaaccttggatctgaagtgagcctcatagaggacttgatggatcctgctctt
cagcatggagaacttggcctaatgttcaccactctcaaagcttgctactaccagattcag
agagagaaacctactggcatgtag
DBGET
integrated database retrieval system
