Clarias gariepinus (North African catfish): 128523894
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Entry
128523894 CDS
T10780
Name
(RefSeq) speckle-type POZ protein-like A
KO
K10523
speckle-type POZ protein
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04340
Hedgehog signaling pathway
Brite
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
128523894
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GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
Motif
Other DBs
NCBI-GeneID:
128523894
NCBI-ProteinID:
XP_053352047
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Position
5:complement(39451936..39472054)
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AA seq
380 aa
AA seq
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MSSGPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSSGPSDKMKWCLRVN
PKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREETKAMESQRAYRFVQGKDWG
FKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQSNTNVLKVPECRLSDDLGN
LWECSRFTDCTLCVRGQEFKAHKSILAARSPVFNAMFEHEMEESKKNRVDISDIEPDVFK
EMMGFIYMGKAPNLEKMADSLLAVADKYALERLKVMCEESLCSSLCVENVADTLVLADLH
SAEQLKAQAIDFINRCSVLRQLGCKDGKYWNSNHAADIMETPGWKAMIQSHPHLVAEAFR
ALASAQVPPFGPPRKRLKQS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcggcccagtggctgagagctggtgctacacacaggtgaaagtagtaaaattc
tcctacatgtggaccattaataacttcagcttctgtcgagaggaaatgggtgaagtactg
aaaagctccaccttctcttcagggcccagtgacaagatgaaatggtgcctcagagtaaac
ccaaaaggacttgatgatgaaagtaaagactacctgtcactctatctcctcctggtcagt
tgtccaaaaagtgaagtgcgtgcgaagtttaagttttctctactcaacgctaaacgagag
gagaccaaagctatggaaagccaaagagcctatcgattcgtccagggcaaagactggggc
ttcaagaagttcattaggagagattttcttctcgacgaagcgaatggtctccttccagac
gacaaactcactctgttctgtgaggtgagtgtagtgcaggactccgtaaatatctcaggt
caatcgaacacaaacgtactgaaagtccccgagtgccggctctcagacgatttggggaat
ctgtgggagtgttcacgcttcaccgactgcacactgtgtgtccgagggcaggagttcaaa
gcgcacaaatccatcctggcagcgagatcgccagtttttaacgccatgtttgagcacgag
atggaggagagcaagaagaaccgggtggacatcagcgacatcgaaccagacgtctttaaa
gaaatgatggggtttatatacatggggaaagcgccgaatctggagaaaatggcagacagt
ttgttggcagtggctgataaatacgctctggagcgtttaaaggtgatgtgcgaggagtcc
ctgtgcagcagcctgtgcgtggagaacgtagccgacaccctcgtcctcgccgacctgcac
agcgccgaacagctcaaagctcaagccatcgattttatcaacaggtgcagcgtcctccga
cagctcgggtgcaaggatggaaaatactggaatagcaaccacgccgcagatataatggag
actccggggtggaaggcaatgatccagtctcatccgcacttagtggccgaggctttccgc
gcgctggcctcggctcaggtcccccccttcggcccgcccaggaagaggctcaaacagtcc
tga
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