KEGG   Clarias gariepinus (North African catfish): 128523926
Entry
128523926         CDS       T10780                                 
Symbol
col4a2
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
  KO
K06237  collagen type IV alpha
Organism
cgar  Clarias gariepinus (North African catfish)
Pathway
cgar04510  Focal adhesion
cgar04512  ECM-receptor interaction
cgar04820  Cytoskeleton in muscle cells
Brite
Exosome [BR:cgar04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   128523926 (col4a2)
Glycosaminoglycan binding proteins [BR:cgar00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   128523926 (col4a2)
SSDB
Other DBs
NCBI-GeneID: 128523926
NCBI-ProteinID: XP_053352107
LinkDB
Position
5:19200863..19272560
AA seq 1670 aa
MKCKLRMEGVMQPQQRGLVKLLRVLLICLAVLVLTSEVNAGGKKHSGICGGRDCSGGCQC
YPEKGARGQPGPLGPQGPSGPLGRAGEPGLQGFKGEKGDSGGKGITGPKGSQGLIGSPGF
PGANGIPGHPGQQGSRGKPGADGCNGTRGDPGNPGIDGFSGSPGENGWPGRKGEKGDPLE
ISIYMERFRGDRGVSGFIGPVGPPGSRGYPGRPGVTGAQGEKGYRGPPGPKGNPTTVYKG
EKGQRGDVGAPGPSGKLTDELKDLIPGPNGEKGEKGLPGDLGGHSKGETGVPGFIGERGP
PGRNGLPGRKGDAGDTGFAGLPGNKGEPGEPGELIYSNGNSEVGPKGERGPPGKDGPRGM
KGLQGPPGPDAQEQSIVLFGLFGPKGEKGRKGDTGEPGIPASEPGPPGIKGEQGPPGPPG
PKGSWGTFFKGSEGPSGRPGNAGIKGQKGDHGHCECTSQTSPPGLPGLAGTQGDPGIVGE
WGQKGDQGEQGPRGLDGLHGFPGPQGLPGSKGFKGDRIEVTEKGSPGEPGDPGRPGERGN
QGHPGPKGIDGSPGPHGPPGEGPVGEPGEKGYPGRPGPPGFPGVRGEEGPGIKALKGVKG
TVGDPGINGFDGYPGLPGTSGDCSLQGEGGEWITAGDCKGGLPGHMGPPGPLGMEGMPGL
PGPKGLPGDRGRIGAKGDQGDQGIGGPPGEKGFIGPRGDAGSAGPKGLKGFPGTPGKPGL
AGDAGQKGPNGEALGASPGPPGERGPSGLQGIKGLSGNPGTIGYPGMEGMPGMIGTKGEL
GPEGLQGEIGRPGPAGIFGFPGNPGQAGPPGPPGQIGLPGPTGETGHRGDGGPPGPPGVK
GFQGEAGSDGRPGGYGTQGDPGLPGHVGRTGVPGLKGIKGSPGMTGFQGMSGDPGQTGLS
GEKGLLGMPGQQGKKGDMGPQGPKGERGVMGPPGQMSGIELEHMKEVMKGAKGEHGDRGS
AGFTGPRGTKGMQGVPGQEGKHGLPGEPSNVKGLLGQPGAQGLPGQKGMPGPTGSPGIPG
FFGPSGNRGDKGSPGAYGAKGAVGIKGIKGEEGDVIDLPGPTGTRGETGQPGPLGESGFH
GQTGDRGSPGFDGIQGPKGAQGEPGEQGTSGADGLKGFPGNQGSKGWPGVPGEAGTPGKP
GHLGQIGFPGLDGLSGLHGLKGQKGLQGVSGLDNWGIPGEDGAKGEVGDPGIPNTEIGFP
GAHGLKGSIGDAGDQGEPGPPGDQGPPGAQGIPGKKGFSGDTGLPGQKGLPGFPGHTGLP
GAPSPSGAKGERGIYGDPGISGPKGLRGNMGDKGFPGESGVSGGKGTTGAMGDMGVPGPH
GLHGDRGNPGRKGESGPPGPPGPPGAKGLPPVPVMVPGERGPPGSLGEQGIQGERGKPGN
MGPPGDPGIIGPKGHKGMQGLPGIPGTPGVRGNVGPTGHQGLQGLEGSRGRPGIPGPTGM
PGRSVSVGYLLVKHSQSDQTPMCPVGMSKLWEGYSLLYFEGQEKAHNQDLGLAGSCLPRF
NTMPFLYCNPGDVCYYASRNDKSYWLSTTAPIPMMPVEEADIKPYISRCSVCEAPSVAIA
VHSQDITIPHCPLGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRTTPFIECNGA
KGTCHYFSNKHSFWLTSIDQSFHSTPESETLKAGQLLSRISRCQVCMKNL
NT seq 5013 nt   +upstreamnt  +downstreamnt
atgaaatgtaaattgcgcatggagggagtgatgcagccacagcaacgaggactagtgaaa
ctcttaagggttcttttgatttgtctcgccgtcctcgtcctgacgtctgaagtaaacgcg
ggtggtaagaagcacagtgggatatgtgggggcagagactgcagtggtggttgtcagtgc
tatcctgagaaaggtgcaaggggccagcctggtcctcttggccctcagggtccttctggg
cccctaggacgtgcaggtgaacctggcctgcaaggttttaagggagagaagggtgactca
gggggaaaaggcattacaggccctaaaggatctcagggactgataggaagtccaggtttt
ccgggagctaatggtattccaggtcacccagggcagcaaggttctcgaggaaaacctggt
gctgatggctgtaatggaactcggggagatcctggaaaccctggcatcgatggatttagt
ggttctcctggagaaaatggatggccaggcaggaagggtgagaaaggggatcctctagag
attagcatttacatggagagatttcggggtgatcgaggagtttcaggatttataggacct
gtgggccctcctggaagcagagggtatccaggccgaccaggtgtcactggtgcccagggc
gaaaagggttatagaggacctccaggaccaaagggcaatccaactacagtctacaaagga
gaaaaaggacagcggggggatgttggagctccagggccatcaggaaagttaactgatgag
ttaaaagacctcattccgggtcctaatggcgagaaaggcgagaaaggtttaccaggtgat
ttggggggtcattccaaaggagaaaccggagttcctggatttattggggaacggggccct
ccaggaagaaatggattgccaggaagaaagggtgatgctggagatacaggctttgctggg
ctgccaggaaacaagggggagccaggagagccaggagagctgatctattcaaacggaaat
agtgaagttgggccaaaaggagaacgtgggccacctgggaaagatggtcctagaggaatg
aaaggattacagggtccccctgggccagatgctcaggaacaaagcatagtcttgtttggt
ctatttggaccaaaaggggaaaaaggaagaaaaggtgacactggggaacctggtattcca
gcttcagagcctgggcctccaggcattaagggagaacaaggaccacctgggccacctgga
ccaaagggatcatggggtacgttttttaaagggtctgaagggccaagtggacgtccagga
aatgctggcataaaaggacaaaaaggtgaccatggtcactgtgagtgcacatcacaaacc
tcccctcctggactcccaggcctagctggaactcagggtgaccctgggatagtgggcgag
tggggtcaaaagggtgatcagggagagcagggacccagaggcttggatggtctgcatggc
tttcctggtccacaaggcctccctggatctaaaggctttaagggagacagaatagaggtt
acagagaaaggatcacctggagaaccaggagaccctgggagaccaggtgaacgaggaaac
caaggtcaccctgggcctaaaggaatagatggtagccctggacctcatggccctcctgga
gaagggccagttggtgagcctggagagaagggttatccaggcaggccaggtccaccaggg
tttcctggagttcgaggggaagaaggtccaggaatcaaagctctaaagggtgtaaagggt
actgttggtgatccaggaataaatggttttgatggatacccaggcctaccgggtacttca
ggagactgtagtctacaaggagaaggaggcgagtggattacagcaggggattgtaaaggg
ggacttccaggacatatgggacctccaggaccccttggaatggaaggaatgccaggtcta
cctggtcccaaaggattaccaggagatagaggcaggataggagctaaaggggatcaagga
gaccagggcattggaggaccacctggagaaaaaggttttattggacctcgtggagacgca
ggtagtgctggaccaaaaggtctcaaaggatttcctggcactccaggtaagccagggctt
gctggtgatgctggacaaaagggtcctaatggtgaagctctaggagcatctccagggccc
ccaggtgaacgtggaccatcaggactgcaaggcataaaaggtttatctggaaatcctggc
acaattggatacccaggcatggaaggaatgcctggaatgattggcaccaagggtgaatta
ggacctgaaggtttacagggggaaataggaagacctggaccagcaggaatatttggcttc
cctgggaatcctggtcaagcagggccccctggacctccaggccaaattggactgccaggg
cctacaggagaaaccggccatcgaggagatggtgggcccccagggcccccaggagtgaag
ggttttcagggagaagcaggaagtgatggtaggccaggaggttatggaacacaaggggat
ccaggactcccaggacatgttgggcggactggtgtcccgggacttaaaggtataaaaggc
tctccaggcatgacaggtttccaaggaatgtcaggagatcctggtcaaacaggcctttca
ggagagaaagggcttttaggaatgccaggtcaacaaggaaagaaaggggacatgggccca
cagggaccaaaaggtgaaagaggagtaatgggccctccaggtcaaatgtccgggatagaa
cttgaacatatgaaagaggtcatgaaaggtgcaaaaggtgaacatggagatagaggatct
gcaggtttcactggaccccgaggcaccaaaggtatgcaaggagttccaggacaagagggg
aaacatggattgcccggggaacccagcaatgtaaaaggtctgttaggtcagcctggtgct
cagggacttcctggacagaaaggaatgccaggtccaacaggatccccaggaattcctgga
ttttttggaccaagtggcaaccggggagacaaaggttcacctggtgcttatggagcaaaa
ggagctgttggaatcaagggtattaaaggtgaagagggtgacgttatagatctgccagga
cctacaggaaccagaggggaaactgggcagcctggacctttaggtgaaagtggtttccac
ggtcaaactggagacaggggaagtcctggttttgatggcatccaaggacccaaaggggct
caaggtgaacctggagaacaagggacatcaggtgctgatggtctaaagggctttccagga
aaccagggatcaaaggggtggccaggtgtgccaggagaggccgggacccctggtaaacca
ggtcatctaggacaaataggttttcctgggcttgatgggttatcagggctgcatggactt
aaaggtcaaaaaggtcttcaaggtgtttcaggacttgacaattgggggataccaggtgag
gatggagcaaaaggagaagtaggagaccccggtattcctaacactgaaattgggtttcct
ggagctcatggccttaaagggtcaataggagatgcaggtgatcagggtgaaccgggtccg
ccaggagatcaagggcctccaggtgcccagggaattcctggtaaaaagggtttttcaggg
gacacaggacttcctggtcagaaaggtcttccaggctttccaggacacactggtctgcca
ggtgctccatctccatctggagctaaaggagaacgtggcatttacggggatcctggaatc
tcaggaccaaaagggctacgaggaaacatgggagataaaggatttcctggagagtctggt
gtatcaggaggaaaaggtacaacgggagccatgggagatatgggtgtcccagggccacat
ggattacatggtgatagaggtaatcctgggcgtaaaggagagagtgggccaccaggtcca
cctggcccccctggtgctaaaggactcccaccagttcctgttatggtgccaggtgagaga
ggaccccctggttcacttggtgagcaaggaatacaaggagagagggggaagcctggcaat
atgggaccccctggagatccagggattattggaccaaaggggcacaagggaatgcaaggg
ctgcctggaattcctggaacaccaggtgtccgtggaaatgtcggaccaacaggacaccaa
ggcctccagggcctagaaggaagccgtggccgccctggtattcctggtcccactggtatg
ccaggacgcagtgtaagtgttgggtacctcctggtgaaacacagtcagtctgatcagaca
ccaatgtgccctgtgggaatgtccaagctgtgggagggatacagcttgctttactttgaa
ggtcaggagaaagctcataatcaggaccttggtttggcaggctcttgtctccctcgattc
aacaccatgccattcctctattgcaaccctggtgatgtatgttactatgctagtcgcaat
gacaagtcttactggctttccacaactgcccctattcccatgatgcctgttgaagaggca
gatataaagccctatatcagccgctgttcagtatgtgaggctccatctgtggcaatagct
gtgcacagtcaagatataactatcccacattgccctttaggctggagaagtttatggatt
ggctactctttcctgatgcatacagcagctggagatgaaggaggtggccagtctctggtg
tctccaggctcatgtctagaagatttccgcaccacccctttcattgagtgtaacggagct
aagggtacctgtcactacttctctaacaagcacagtttctggctgacgtccattgatcag
tcattccacagtacaccagagtctgagacgcttaaggctggacagctcctctcacgcatc
agtcgctgtcaagtctgcatgaagaacctgtga

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