Clarias gariepinus (North African catfish): 128523960
Help
Entry
128523960 CDS
T10780
Name
(RefSeq) interferon-induced GTP-binding protein Mx-like isoform X1
KO
K14754
interferon-induced GTP-binding protein Mx
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
128523960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
MMR_HSR1
TetR_C_15
AAA_16
AAA_21
AAA_29
DUF371
MitMem_reg
MazG
Motif
Other DBs
NCBI-GeneID:
128523960
NCBI-ProteinID:
XP_053352173
LinkDB
All DBs
Position
5:15336307..15348048
Genome browser
AA seq
637 aa
AA seq
DB search
MSRRKNYKTPEEMSNSLNQQYEDKVRPYIDLVDSLRTLGVEKDLNLPAVAVIGDQSSGKS
SVLEALSGVALPRGTGIVTRCPLVLKLKRNEKDDTWSGVLTYKDQIKNLHKPSDVGIAVS
HAQNVLAGEGKGISQQMISLEIKSKEVPDLTLIDLPGIARVATGDQPVDIEKQIKELIEK
FIKRQETISLVVVPANIDIATTEALKMTHKVDPNGQRTLGILTKPDLVDKGAEESVVNTV
NNQVIPLKKGYMIVKCRGQQDINENLTLSKALQNEQVFFEEHPQFRPLLEEGKATVPVLA
ERLTKELVEHIEKLLPQLQKQVEDKLEKTATELKRLGDGVPREEIERNKFLIEKISNFNE
VLTDMMRAEENTHNLKPKVFTKIRKEFAKWKRELDDKVIKLEENLRDEVEEYSKNCRGKE
LPGFVNYRTFENMVKKHIQEMEEPAIELLRNTIEIVHSFVNKVVRSHFEAFPNLLRAAKE
PVEDLLEQEHGKALEKIQSQFKMEKIVYSQDDLYSRQLDAVKFKLEQVRNHSNIAFNKSV
NADVREMAQHLKAYFMITSDRLANQLPLIAQYHVLDQYLSQLQAAMLSMIGGQNAEKLIR
EDSSVAHRRSCLKDRLERLRKARQLLSKFNCQSPSSN
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgaaggaagaactacaaaactcccgaagaaatgagtaacagcctaaaccagcaa
tacgaggacaaagtacgtccctacattgatcttgtggacagtctgaggacactgggagta
gagaaagacctcaacttgccagctgtggctgttataggtgatcagagttcaggaaagagt
tctgtattggaggccctttcaggggtagccttgcctagaggaacaggtatagtgacgcgc
tgccctttggtattgaaactaaagagaaatgaaaaggatgacacatggtctggagttcta
acatacaaggatcaaatcaagaacctccacaagccatcagacgtggggattgctgtttca
catgctcagaatgtcttggccggggaggggaagggaatcagccagcagatgatctctcta
gagattaaatccaaagaagttcctgatcttacccttattgacctgccaggcatagccagg
gtggcaacaggtgaccagccagtggacattgaaaagcagatcaaagaacttattgagaaa
ttcattaaaagacaagaaactattagcctggtggtcgtgcctgcaaacatcgacattgcc
accacggaagcactgaaaatgacacacaaagtggatccaaatggacaaagaactctggga
atccttaccaagcctgacttggtggataaaggtgcagaggagagtgttgtaaatacagta
aataaccaggtgatcccactgaagaagggttacatgatcgtgaagtgccgtggccagcaa
gacattaatgagaatctgactctgtcgaaagctcttcaaaatgagcaagtcttttttgag
gaacatccacaattcagaccactcttggaggaagggaaagccacagtgcctgtacttgca
gaaagattgaccaaggaactggtagaacacatagaaaagctacttccacagttgcagaaa
caagttgaggacaaattggaaaaaacagctactgagctaaaacggcttggagatggagtt
cctcgagaggaaattgagagaaacaaatttcttattgagaaaatcagcaactttaatgaa
gttcttactgatatgatgagggcagaggaaaacacccataacttaaagcctaaagttttt
actaaaatcagaaaagagtttgcaaaatggaaacgtgagctggatgacaaggttatcaaa
cttgaagaaaaccttcgggatgaagttgaagagtactccaagaactgtaggggaaaggag
cttcctggatttgttaattacagaacttttgaaaacatggtcaagaaacatatacaggaa
atggaggagcctgctatagagttactgagaaacaccattgaaattgttcactcttttgtg
aacaaggtggtcaggtcccattttgaggcatttcccaatctgctgagggcagctaaagag
ccggttgaggacctccttgagcaagagcatggaaaagccctagagaaaatacaatctcaa
ttcaaaatggagaagattgtctattcacaagatgacctctacagccgccagctagatgct
gtcaaatttaaactagaacaagtcaggaatcattcgaacatagctttcaacaagtcagta
aatgctgatgtcagggagatggctcagcacctaaaagcctatttcatgatcacctctgac
cgtctggccaaccagttgcccctcattgcgcagtaccatgtgctggaccagtatctctct
cagcttcaggccgccatgttgagcatgattggaggccagaatgctgagaaacttattcga
gaagattcgtcggtagctcatcgtagaagttgcttgaaggaccgcttggagcgtctgaga
aaagcacgccagctcttatccaagtttaactgccagtctcctagttctaattaa
DBGET
integrated database retrieval system
