Clarias gariepinus (North African catfish): 128523965
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Entry
128523965 CDS
T10780
Symbol
tmtops2b
Name
(RefSeq) teleost multiple tissue opsin 2b
KO
K04256
c-opsin
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgar01009
]
128523965 (tmtops2b)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cgar04030
]
128523965 (tmtops2b)
Protein phosphatases and associated proteins [BR:
cgar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128523965 (tmtops2b)
G protein-coupled receptors [BR:
cgar04030
]
Rhodopsin family
Vision
Opsin
128523965 (tmtops2b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
QueG_DUF1730
Motif
Other DBs
NCBI-GeneID:
128523965
NCBI-ProteinID:
XP_053352184
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All DBs
Position
5:18540345..18551091
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AA seq
365 aa
AA seq
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MSDPDLHTSLAADSGDSPGPKLSPAGFAALSVFLGFIMTFGFLNNFVVLVLFCKFKKLRT
PVNMLLLNISVSDMLVCVCGTSLSFASSVCGRWLLGRTGCMWYGFINSCFGIVSLISLVI
LSYERYSTMTVYNNREPNYNKHLLAVGGSWLYSLIWTVPPLLGWSSYGLEGAGTSCSVSW
TDHSSKSRSYIICLFIFCLGLPVLVMVYSYSRLLYAVKKLGKICRTARKRDYHLLIMVIT
NVVCYLLCWTPYSVVAIMATFGQPGIITPVASIVPSLLAKSSTVINPIIYIFMNKQFYRC
FLMLLGFNERSEMTDDNPLMTTKNKMIQLKSIMHSNPKSCTPPHASPLLQEHSCIMVTEE
QSVTT
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcctgacctgcacacgtctctggccgctgactcgggcgactctcccgggccg
aagctctcccccgcgggcttcgctgcgctctccgtcttcttgggctttataatgactttc
ggctttctgaacaactttgtggtcttggtgcttttctgtaaatttaagaagctcaggacg
ccagtgaacatgctcctgctgaacatcagtgtgagtgacatgctggtgtgtgtgtgcgga
acgagcctaagcttcgcgtccagtgtgtgcgggcgctggctgctggggaggactggctgc
atgtggtacggcttcatcaactcctgcttcggtattgtatccttaatatccttggtgatt
ttgtcttatgagcgctacagcacaatgacagtgtataacaaccgggagccaaactacaat
aaacacttgctggcagttggggggtcatggctctactccctgatttggactgtcccacct
ctgctggggtggagtagttacgggttagagggagctggaaccagctgttcggtgtcatgg
actgatcactcctctaaatcccgttcctatattatctgcctattcatcttttgcctgggt
ctgccagtgctggtaatggtgtacagctatagcaggctgctatatgctgtcaaaaagtta
gggaagatttgcaggactgcgcgaaagcgagattaccacctattgattatggtcatcacc
aatgtggtgtgttatctgctgtgttggacaccatacagtgtggtggccattatggccaca
tttggtcaaccgggaatcattacacctgttgcaagcatagtcccgtcacttcttgccaag
agcagcaccgtcatcaacccaatcatttacattttcatgaacaaacagttctacagatgt
ttcctgatgctgttaggctttaatgaaaggtcagagatgacagatgacaaccctttaatg
accaccaagaacaaaatgatccagctcaaaagcatcatgcacagcaaccccaagtcctgt
acaccacctcatgcatctccgctcctgcaggaacacagctgcatcatggtcactgaggaa
caaagcgtcacaacctaa
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