KEGG   Clarias gariepinus (North African catfish): 128524053
Entry
128524053         CDS       T10780                                 
Symbol
parp4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
cgar  Clarias gariepinus (North African catfish)
Pathway
cgar03410  Base excision repair
cgar04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    128524053 (parp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    128524053 (parp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cgar03400]
    128524053 (parp4)
DNA repair and recombination proteins [BR:cgar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     128524053 (parp4)
SSDB
Motif
Pfam: VIT PARP4_MVP-ID PARP VWA_3 VIT_2 VWA WGR-like_PARP4 BRCT VWA_2 BRCT_2 PTCB-BRCT VWA_CoxE
Other DBs
NCBI-GeneID: 128524053
NCBI-ProteinID: XP_053352316
LinkDB
Position
5
AA seq 1938 aa
MSIFSDCSVVLDLKHTPFKEKRKLTNALLDNGGNISYIVNQKCSFLVTNNLESLSTSRWR
SAQKHQTPVVSPQYVWNCLEKGLLLPVQEHVLSPLSSDLAPEQDLHPGLKSRHQSQPQNH
GIHDQKAANQVKDGTYLGQFRVYKDNDDDIPEFPSEFHVAKYSILAKAHLKIWSVLELQS
AKGQAGQQYRVVSSIVHEKEKSVILDKQVHSCSSEDALEAYLMLRKDLQVQGFTQTQTLP
PWAEKLISDSLQQLLLEEKLNCSTVSQEVGTFVELIWTEALGSLSSILTVPVTSISLNDV
SRVEGLLLQVQKSQREDEVKGLLEEVKTLLPLRIREPDSKNKLVSQKLDLCQLIRDILNM
SEATLGNPSPSSLGKYRALRCSIEQVPPQSAEFLSVSQLLEDRPAQIQQILRVSRGTELH
MFRNDLGNVKSLLHSTASSSLVGILSRGLLLPRVGVEQHGIERTDIGNLGSGIYFSDSLN
TSMKYSKPSVTDGCRLLLVCEVALGQCQDLHKRDFTLTCAPEGYNSVHGVRRTRRTQSDF
EDDEYVVYNTDQIRLKYVVQYFLNEDEIKDFQPHVDTTLAPLDSESSSHLLSSDDGEGLG
ETKNPLEDVTAGLLDSNGQTLPLQAVHVRCKLMDLLSQVIIFQTYTNNSSFPIEAKYVFP
LEETAAVCGFEAFINGKHVIGKVKEKEQARKEYKQAIEKGHGAYLMDQDAPDVFTISVGN
LPPGATVLIKVTFITELVVRAGTIVFSLPGSVAPWQQSSALNQRTQTTVEKVCVNELQPE
GEFSLCMSVEMPYEIINLECSHQIKIKRTDCKAVVSTLPDQMLSTDGFWFSFSLFQIHMP
RMWVEKHPEKDTEACMLVFYPQFESSDVSGSDVSDVIIMLDTSESMRGDGMLNARRIALK
VLNSLDRSLRVNIISFGSDYKEAFPSASLLEEVFDEAKKFIMTLAPVGGSTELWRPLRTL
NLLPPSRGIRNVLLISDGHVQNQPQTLQLVRNNVRHTRLFTCGLNPTANRYMLRALAQAG
GGTYEFFDTKTKHTWAEKVNSQVRCMLAPGCSSVAVKWQQFNPTAPSPVQAPSQLHALFN
DCHTLVYGFVPHCTRATLFGDLSGKEIETMVSTTELQKTKGTFLHKLTARAVIRDFEDGS
LGCSEAEHEGKKAELKSYIIELSKEFSILSQFTSFVAIEERDQDQPDSGFTNVPKIIEEE
DVDILPYMAWTEQKEYGVEPTGTRLQLCEEEDEEKLDSEEEVDMGYCLFDAEDSEYAEGG
SLLDLYALNLEAQEESSSPGFPEFTSFAQTSACSDALPYFSECPSFSMVGSALSDTLPLH
TPDVLDLSASRPASVPSTKIFSSFSNTSEVHPTLPIRARHVSSSLARHEAMLGSARLTYN
RAGPVMKDIDQYAGVIRPARTHKSSFVSPTRASHFSGGIDRDEPMYESAGLPSLLAEACH
VWRQDDLSERGGGSPAPPPPPSGGSHVLSGVDLFGPAGGLAAPPPPPPPPGASSVLSDFA
LHYVPMSGLGAPSYAPVSPSAVASTGAPARQRTAAFCSTSFGSKAAPTPPPSVSFRDLPH
TVESEASVPPSLPIHWNTSSYDAHSFGSIGVPGTFSSLVIGAPATSSSLVFGDRATLSSH
VNGAPAIFSERAASETPLQKSCSAPPPPVASAQPCVAAPGAPFSYSGIKFSLPARPASPV
FGASPSSSAIKFRPPVVAAAAAPPPPPPSADMHHGASDLAQPCFVPKAVGRSLMRRSKKR
SSHSFDHEMVNAYETRSTGPLETAESDQVETDSIREQYRRPDRINWEELLNLQHQDGYWE
CTGTLSRFLGLDVDFFANVFLKEKGICSLGTKAHADILKLVATLLVLQLMRVLKIAEGKL
FQSLFRLTDYPEPRPACWEAVTRAVKWVCWADRQYPCVCSRLEFGSDWESCTRQLLGLDP
LPPVSPLIPLLQRRAPVM
NT seq 5817 nt   +upstreamnt  +downstreamnt
atgtctatattcagtgactgttctgtggtcctggacctgaaacacaccccctttaaagag
aaaagaaagcttacgaatgctctattggacaatggaggaaatatatcatatatagtgaac
cagaagtgctcgtttctggttacgaacaatttggagagcttaagcaccagcaggtggagg
agcgctcagaaacaccagacacctgtggtcagtccgcagtatgtgtggaattgcctggag
aaaggacttctgctacctgtccaagaacatgtcttaagcccactgagctcagacctcgca
cctgaacaagatctacaccctgggctgaagtccagacatcagtcccagccccaaaaccat
gggattcatgatcagaaagctgccaatcaagtgaaggatgggacgtacctgggccaattc
agagtgtacaaggacaatgatgacgatataccagaatttccttcagaatttcacgttgcc
aagtactccattttggccaaggcccatctaaagatatggtcagttctggagctccagagt
gccaaaggccaagcgggacagcagtatcgtgttgtgagctccatcgtgcatgagaaagag
aagagtgtaattttggataagcaggtgcacagctgtagctctgaggatgctctggaggcg
tatctgatgctgaggaaggacctgcaggtccaaggcttcactcagacacagacactaccc
ccatgggctgaaaagctgatctccgacagcctacagcagctgctgttggaggagaagctg
aactgtagcacagtctcacaggaagtgggtacctttgtggaactcatttggacggaagct
ctcggttcacttagcagcatcctgaccgtccctgttaccagcatcagtctcaatgacgtg
agcagggtggaaggattactgctgcaggttcaaaagagtcagcgtgaggatgaagtaaag
ggtctgctggaggaagtcaagactctgctacctcttcgaataagagagccagactcaaaa
aacaagctggtctcccagaaactagatctctgtcagctgatcagagatattctgaacatg
tcggaggcgactttgggaaacccaagtccatcttctctggggaaatatcgtgctctgagg
tgtagtatagagcaggtgccaccacaaagtgcagagtttctgtctgtctctcagcttctg
gaggacaggccagctcagatccagcagatacttcgtgtgagtagaggcacagagcttcat
atgtttaggaatgatctcggcaacgtgaagtctctcctccattccactgcctccagcagc
ctggtcggaatcctgtctcgaggtttgttactgcccagagttggagtagagcagcatgga
atcgaaagaacagacatcgggaatctgggaagcggcatctacttcagtgactcattaaac
acgtcgatgaagtattccaaacccagtgtgactgatggctgtcggctcctgctggtgtgt
gaggtggctctgggccagtgtcaagatctgcataaaagggatttcaccttgacctgcgct
cctgagggctacaacagtgtgcatggagtccgccgtacacgaagaacacaatctgatttt
gaggatgatgaatatgtggtctataacacagaccagatcaggctgaaatatgttgttcag
tattttctaaatgaggatgaaatcaaggactttcagcctcacgttgacacgacactagcg
cctctagattcagaatcatcttctcacctcttgtccagtgatgatggggaaggtttagga
gagaccaaaaaccctctggaggatgtgactgctggtttgttggacagtaatggtcagaca
ctccccctgcaggccgtacatgtgagatgtaaactaatggaccttctctctcaggtcatc
atttttcagacatacacaaataacagcagttttcctattgaggcaaagtatgtgtttcct
ctggaagagactgcagcagtgtgtggctttgaagccttcattaacgggaaacatgttatt
ggaaaggttaaggagaaggagcaggcacgtaaagaatataaacaggcaatagagaaaggc
catggagcctacctgatggaccaggatgcacctgatgtgttcaccatcagtgtgggaaac
ctgcccccgggagccacagtgctgatcaaagtgacgttcatcactgagctggttgtgaga
gcaggcaccatcgtcttttcactgccaggcagtgtggccccttggcagcaaagctcagca
ctgaaccagagaacccagactaccgttgaaaaggtctgtgtgaacgagcttcaaccagag
ggagaattctctctgtgcatgtctgttgagatgccctatgagatcattaacctggagtgc
tctcatcaaatcaaaatcaagaggacagattgtaaggctgtagtaagcaccttaccagac
cagatgctcagcactgatggcttctggtttagctttagtctgttccagatccatatgcca
agaatgtgggtggagaaacatccagagaaggacaccgaggcctgcatgctggtgttttat
ccacagttcgagtccagtgatgtttctgggtcggatgtgagtgatgtgatcattatgctg
gatacgtcagagtccatgcgaggtgatggaatgctgaatgcacgcaggattgctctgaag
gttctcaactcactggaccgttcactaagagtcaacatcatctccttcggctctgactac
aaagaggccttcccttcagcaagtttgctagaggaggtttttgacgaagccaagaaattc
attatgaccttggctcctgttggtggcagcacagagctatggcgacctctgcgcaccctg
aatctgctgcctccttcacgtggcataagaaatgtgttgcttatctctgatggacatgtg
cagaaccagcctcaaaccctgcagctggtgcgaaacaatgtcagacacacacgcctcttc
acctgcggccttaacccaacagccaatcgttacatgctgcgagcgctggctcaggcaggt
ggaggaacatatgagttttttgacacaaagacaaagcacacttgggctgagaaggtgaat
tctcaggtgaggtgcatgctagctccaggctgcagttctgtggcagttaagtggcagcag
ttcaaccccacagctccttctcctgttcaggctccctcacagctccacgccctgttcaac
gactgtcacactctggtctacggatttgtcccacactgcacacgggccacgctctttggt
gatctgagtgggaaggaaattgagacaatggtctctactacagaattacagaagactaaa
ggaacattccttcacaagctcactgcaagagcagtcatcagagactttgaggatggcagc
cttggatgcagtgaggcagagcacgaggggaagaaagcagagctgaaatcctacatcatc
gagctcagtaaagagttctccatcctgtcccagtttaccagctttgttgctattgaagag
cgagaccaggatcaacctgactctggctttaccaacgtccctaagatcattgaagaagaa
gatgtggatattcttccttatatggcctggacagaacagaaagagtatggtgtggaaccc
acaggaacgagattgcaactgtgtgaagaggaagacgaggaaaaacttgacagtgaggaa
gaagttgacatgggttattgcctttttgatgctgaagattctgaatatgctgaaggcggc
agcttattagatttatatgctttaaatttggaggcccaggaagagagtagttcacccggg
tttccagaatttacctcctttgcccaaacgagtgcttgctctgacgctctcccttatttc
agtgaatgcccaagcttcagcatggttggttctgctctttctgacactctacccttgcat
actcctgatgtccttgatcttagtgcttcaagacctgcttcagttccctccactaagata
ttttcttccttcagtaatacttctgaagttcatcctactcttcctataagagctaggcat
gtttcaagtagtcttgctcgacatgaggctatgttaggttctgcacgccttacttataat
agagctggtccagttatgaaagacattgatcaatatgcaggtgtgattagacctgcacgc
acgcataagtcctcttttgttagtcctacacgagccagtcatttttcgggaggcattgat
cgggatgagcctatgtatgaatctgcaggccttccttctctccttgcagaagcctgtcat
gtttggagacaggatgatctatctgagaggggtggtggttctccagctcctcctcctcct
ccttcaggaggtagtcatgttttaagtggcgttgatctatttgggcctgcgggtggtctt
gcagcccctccccctcctccaccacctccaggagctagtagtgttttgagcgactttgct
ctacattatgtgcctatgtctggtttaggtgccccttcttatgctcctgtttctccatct
gctgttgctagtacaggagcacctgctagacaaagaactgctgctttttgttcaactagt
tttggttccaaagcagcccctactccccctccaagtgttagttttagagaccttcctcat
actgttgaatctgaagcctcagttcctccttccctgcctattcattggaatacaagcagc
tatgatgctcattcttttggttctattggagtccctggtacattttccagtcttgttatt
ggagcccctgctacatcttccagtcttgtttttggagaccgtgctacattatccagccat
gttaatggagcccctgctatatttagtgaaagggcagcatcagagactccattacaaaaa
agttgtagtgcccctcccccccctgttgcctcagctcaaccttgtgttgctgcccctgga
gcccctttttcttattctggtattaaattcagtctccctgctcgtcctgcaagtcctgtt
ttcggagcctctccatcatcttctgccattaaattcagaccccctgttgttgctgctgct
gctgctcctcctcctcctcctcctagtgctgatatgcatcatggagcctcagacctcgct
cagccttgctttgttcctaaagcagtaggtcggtctttaatgagaaggagtaaaaaacga
agttcacacagttttgatcatgagatggtcaacgcctacgagacccgcagcacaggtcct
cttgagacagcagaaagcgaccaagtggagacagacagcataagagaacaatacagacga
cctgacaggatcaactgggaggagctgttaaacctccagcaccaggatggctactgggaa
tgtaccgggacactaagtagatttctcggcttggatgtagacttctttgctaatgtcttc
ctaaaagagaaaggcatctgttctttgggtacaaaggctcatgctgacatcctgaagctg
gtagccacactgctggttctacagttgatgcgagtgttgaagatagcagaggggaaactg
tttcagtctctcttccgcctcactgattaccccgagccaaggccggcctgctgggaagca
gtgacgagagcagtgaagtgggtatgctgggcagacaggcagtacccgtgcgtgtgcagc
aggctggagtttggctcggactgggagtcctgtacacgccagctcctgggattggacccg
ctgccccccgtctcacccctgatccctttgctgcagagaagagcaccggtcatgtag

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