Clarias gariepinus (North African catfish): 128524150
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Entry
128524150 CDS
T10780
Symbol
abcb11a
Name
(RefSeq) bile salt export pump
KO
K05664
ATP-binding cassette, subfamily B (MDR/TAP), member 11
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128524150 (abcb11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgar02000
]
128524150 (abcb11a)
04147 Exosome [BR:
cgar04147
]
128524150 (abcb11a)
Transporters [BR:
cgar02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB11 subgroup
128524150 (abcb11a)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128524150 (abcb11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_22
AAA_29
AAA_16
AAA_15
Rad17
Zeta_toxin
AAA_7
AAA_21
Orthoreo_P10
Motif
Other DBs
NCBI-GeneID:
128524150
NCBI-ProteinID:
XP_053352513
LinkDB
All DBs
Position
5:28885450..28897681
Genome browser
AA seq
1323 aa
AA seq
DB search
MKKSNLSTDPEHMRYEISHDEAATKSITGGVKKEEKALAVGFFQLFRFATWLDIVMMVVG
GLCALSHGAASPLMLLVYSMMTNVFVAYELEIQELADPNKMCINNTVTWTNGTVAKQEDN
TTVHCGVDIEAQMTMFAYYYVGIGVGVLILSYFQIALWVSAASRQTQRIRKTYFRKIMSM
EIGWFDCNSVGELNTRISDDINKVNNAIADQVAIFIERISTFIFGFLVGFFGGWKLTLVV
IAVSPLIGLGAGLMAMAVARLTGRELQAYAKAGDIADEVLSAIRTVAAFGGEEKETERYD
KNLEEAQTWGVKKGTIIGVFQGYLWFIIFLSYALAFWYGSKLVIETQELTPGTLIQVFFG
VLMGAINLGQASPCLEAFASGRAAAKSIFETIDRDPKIDCFSEEGHKLEKVKGDIEFHSV
QFNYPSRPEVKILDTLDLQVKAGETTAFVGPSGSGKSTAVQLIQRFYDPQQGMVTLDGHD
LRSLNIQWLRSLIGIVEQEPVLFATTIAENIRYGRPGVSMEEIIQASKEANAYNFIMDLP
QNFDTPVGEGGGQMSGGQKQRIAIARALVRNPKILLLDMATSALDNESEAIVQEALDKAR
VGRTTITIAHRLSTIRNADVIVGFEHGRAVERGTHKELIDRQGVYFTLVTLQEQGRINPL
TAKTSEGSSFEDDKIERITSFSRGSYKSSLRQSLRMRSLSQMSSNFVEAISGKIKFDTGS
IKMTTLTEGKKFDDVEEIESAPVARILKYNQPEWPYMVFGSLGAALNGAVNPTYALLFSQ
IIGTFAIRNLDEQREQINGICVLFVSVGVMSFFSQFLQGYAFAKSGELLTRRLRKTGFQA
MLRQEIGWFDDPANSPGALTTRLATDASMVQGATGSQIGMIVNSLTNIGASLIIAYSFSW
KLSLVVTCFLPLIGLSGVFQAKMLTGFANEDKKALEMAGQVSSEAMANIRTVAGLAKEKQ
FVALYEQQLDAPYKAAKKKANIYAICFAFAQCVIFMANAASFRYGGYLVSFEGLHYVVVF
RVITALVTSGTALGKASSFTPDYAKAKIAASQFFRFLDRVPKISTSQLEGRRWDNFKGRI
EFKNCRFTYPSRPNIQVLRGLDVEVSPGQTLAFVGSSGCGKSTSVQLLERFYDPDNGQVM
IDGHPSQEINVPFLRSQIGIVSQEPVLFDCTIAENIKYGANSQSITMDEVIEASKKAYLH
DFVMSLPDKYETYVGAQGSQLSRGEKQRIAIARAIIRNPKILLLDEATSALDTESEKTVQ
AALDEARCGRTCIVIAHRLSTIQNADIIAVMSQGIIIEKGTHDELMAKIGAYHKLVTTGA
PIS
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaagtaatctgagcacagatcctgaacatatgagatatgaaatatctcatgat
gaagcagccactaagagtataactggtggtgtcaaaaaagaagagaaggccctggctgtt
ggttttttccagttgtttcgctttgccacatggctagatattgtcatgatggtcgttgga
ggactgtgtgcacttagccatggtgcggcctctcctctcatgctgctagtctacagcatg
atgactaacgtctttgttgcctatgagttagagattcaggaacttgctgatcccaacaaa
atgtgcattaataacacagtcacctggactaatgggactgttgcaaagcaggaagataat
accactgtgcattgtggtgtagatattgaggcacagatgaccatgtttgcttattattat
gttgggattggagtgggggtgttaattcttagttattttcagattgctctgtgggtttct
gcagcttcaaggcagactcagagaatccgaaaaacatacttcaggaagatcatgagcatg
gaaattggatggtttgattgtaattcggttggagagctgaacacaagaatatctgatgat
ataaacaaagtcaacaatgcaatagcagatcaagtagccatatttattgaaagaatctct
acatttatttttggttttctggtgggcttttttggaggatggaagctgacactggtggtg
atcgcagtaagccctctaataggattgggagcaggacttatggccatggcagttgctaga
ctgacaggtcgtgagttgcaggcctatgccaaagcaggtgatatagctgatgaagtcctc
tctgccatcagaacagttgcagcatttggaggagaggaaaaggagacagaaagatatgac
aagaaccttgaggaagctcagacttggggcgtaaagaaaggaacaatcattggtgtattt
cagggttatctgtggttcatcatcttcctttcttatgctcttgcattctggtatggatcc
aaacttgtcattgaaacacaggagctcacacctggaactctcattcaggtattctttggc
gtccttatgggagccataaacctaggtcaagcctctccatgtctagaggcctttgcttct
ggtcgtgctgcagctaagagcatctttgagacaattgacagggatcccaaaattgattgt
ttctctgaagaagggcacaagttagagaaagtgaaaggtgacattgaattccacagtgtt
cagttcaactatccctccagacccgaagtaaagattttagatactttagacttacaagtt
aaagctggggagactacagcatttgttggacctagtggatctggaaaaagtacagcagtt
cagcttattcagagattttatgatcctcaacaaggaatggtcaccctggatggccatgat
cttcgaagtctgaacatccagtggctgcgttcattgataggcattgtagagcaggaacca
gttctctttgccacaactatagcagagaacatccgttacggccgaccaggagtcagcatg
gaggagattatacaggcttctaaagaagcgaatgcttataactttattatggacctacca
cagaattttgatacaccggttggagagggtggaggtcagatgagcggtgggcagaagcag
aggattgctattgctcgagctctggtcagaaaccctaaaatccttttgctggacatggca
acctcagccctggacaatgagagtgaagctatagtgcaggaggcactagacaaggcccgt
gttggcagaactaccatcactatcgctcatcgtctgtctacaatccgtaatgctgatgtg
attgtgggttttgaacatggccgtgcagtggagaggggcacacacaaagaattaatagat
agacagggagtctatttcactcttgttacactccaggagcaaggacgcattaatccgcta
acagcaaaaacatctgaaggaagcagttttgaggatgataaaattgagcggataacaagt
ttcagcagaggaagctataagtcaagtttaaggcaatccttgcgaatgaggtcactgtct
caaatgtcaagcaactttgttgaggctatatctggaaaaattaaatttgacactggcagc
attaaaatgacaacactgacagaaggaaagaaatttgatgatgtagaagagattgaatca
gcaccagtggctcgaattctaaagtacaaccagcctgaatggccctatatggtgttcggc
tctttaggagcagccttaaatggagccgtcaaccccacgtatgccctcttattcagccaa
atcatagggacgtttgctatcagaaacttggatgaacaaagagaacaaattaatgggatt
tgtgttctttttgtctctgtgggagttatgagtttcttctcacagttcctgcaagggtat
gcctttgcgaagtctggtgagctactgactcgcaggttaagaaagactggtttccaggct
atgcttagacaggaaatcggatggtttgatgatcctgccaacagccctggggctcttacc
acgagattggctactgatgcatccatggtgcaaggggctactggttctcagattggcatg
attgtgaactctttgacaaacattggagcttcattaatcattgcatactccttcagctgg
aagttaagtttagtggtaacgtgctttcttcctcttattggcctctctggagtcttccaa
gctaaaatgttgactggtttcgctaatgaggacaagaaagcactggagatggcaggacag
gtatccagtgaagctatggccaacatcaggactgttgcaggcctggcaaaagagaaacag
tttgtggctctatatgagcagcagcttgatgcaccttacaaagcagccaagaagaaggct
aacatctatgccatctgctttgcctttgcgcaatgtgttatcttcatggcaaatgcagcc
tcatttagatatggtggctatttggttagttttgagggactgcactacgtggttgttttc
agagtaattactgcccttgtaaccagtggcacagctcttggaaaagcttcatctttcact
ccagactatgccaaagccaaaattgctgcttcccagttcttcagatttcttgacagagtc
cctaaaatcagcactagtcagctggagggaagaagatgggataactttaagggtagaatt
gagttcaaaaactgcaggttcacctatccaagccggcctaatatccaggtgctaagagga
ttagatgtggaagtaagtcctggccaaactcttgcttttgtgggtagtagtggttgtggc
aagagcacaagtgttcaactactggaaagattctacgatccagataatggccaagtgatg
atagatggacacccatcccaagaaattaatgtacccttcctgaggtctcagattggaatt
gtatcccaggagcctgtgctttttgactgcacaatagcagagaacattaaatatggagct
aattcacagtccatcaccatggatgaggtcatagaagcttccaagaaggcttatctacat
gattttgtgatgagtctacctgataaatatgagacttatgttggggcacagggttctcag
ctgtctagaggggagaagcagcgaattgcgattgctcgtgcaattattagaaaccccaaa
atcctgctacttgatgaggctacctctgccctagacaccgaaagtgagaagacagttcag
gcagcgttggatgaagctcgatgtggtcgcacttgcattgttattgcacacagactctcc
accattcaaaatgctgatatcattgcggtgatgtctcaaggcatcatcattgagaaaggc
acacatgatgagctcatggctaagataggagcctatcacaagctggttactacaggagca
cctataagttaa
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integrated database retrieval system
