Clarias gariepinus (North African catfish): 128524167
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Entry
128524167 CDS
T10780
Symbol
tnfsf13b
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B isoform X1
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04060
Cytokine-cytokine receptor interaction
cgar04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
128524167 (tnfsf13b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
128524167 (tnfsf13b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cgar04052
]
128524167 (tnfsf13b)
04090 CD molecules [BR:
cgar04090
]
128524167 (tnfsf13b)
Cytokines and neuropeptides [BR:
cgar04052
]
Cytokines
Tumor necrosis fators
128524167 (tnfsf13b)
CD molecules [BR:
cgar04090
]
Proteins
128524167 (tnfsf13b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
PapD_N
Motif
Other DBs
NCBI-GeneID:
128524167
NCBI-ProteinID:
XP_053352539
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All DBs
Position
5:18864190..18869584
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AA seq
281 aa
AA seq
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MSVPLNLWIMPAVGAAPLRVEGQRLSWVVVIASVVAITASSLSALSLYHVLALQAEVEVL
RSEVSRRREGCKDTPGESVRGPQPQQHQHEDDGNKALVRNSVVPPKMHMNASGKQQVRFV
LRKRSLQSESEQSVFQPFLQMMGDSKRKIFQKEFALEKHTGIPWQVSLKRGEALEEDQDG
IVVKEEGYYFIYSQVYYQDPTYAMGHIVIRMKKHVVGDESQHVVLFRCIQTMNVKVPYNT
CYTGGIVKLDIGDRVELLIPRPTANISLDGDCTYLGVIKLA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcccactgaacctgtggataatgcctgcagtgggtgctgctccacttcgagtg
gagggtcagaggctttcatgggtcgtagtgattgcgagcgtggtggcgatcaccgcatcc
tcgctatcggctctgtccctgtaccatgtgctggctctgcaggcagaggtggaagtgctg
aggagcgaggtgagccgcaggagagaagggtgcaaggacacacccggggaaagtgtaaga
ggacctcaacctcaacaacaccaacatgaggatgatgggaacaaagcgctggtgaggaac
agtgtggtgcctcctaaaatgcacatgaatgcttctggaaagcagcaggtgcggttcgtt
ttgaggaagagaagtctgcaaagtgagtctgaacaatcagtgtttcagccattcctgcag
atgatgggagacagcaagaggaagatctttcaaaaagagtttgcactagagaaacatact
ggcattccatggcaagtcagtctaaagcgaggcgaggctcttgaggaagatcaggatggc
atagtggtcaaagaggagggctactacttcatttacagtcaggtttattaccaagacccc
acttatgcaatgggccacatagttatacgcatgaaaaagcatgtggttggggatgaaagt
cagcatgtcgttctgttccgatgcatccaaaccatgaatgttaaggttccctataacact
tgctacactggaggaatagtaaagcttgacattggcgacagagtggagctgctcataccc
cgccccacagcaaatatctctctggatggagactgcacctacttaggggtcatcaaactg
gcctga
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