Clarias gariepinus (North African catfish): 128524176
Help
Entry
128524176 CDS
T10780
Symbol
ube3c
Name
(RefSeq) ubiquitin-protein ligase E3C isoform X1
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128524176 (ube3c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128524176 (ube3c)
Enzymes [BR:
cgar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
128524176 (ube3c)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
HECT type E3
128524176 (ube3c)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
EGF_PRF1
Motif
Other DBs
NCBI-GeneID:
128524176
NCBI-ProteinID:
XP_053352560
LinkDB
All DBs
Position
1:complement(9986551..10016441)
Genome browser
AA seq
1081 aa
AA seq
DB search
MFSFEGDFKRTPKVSLGGASKKEQKASLLHRTQEERRKREDERRRLKSAVVIQSYIRGFQ
ERKRQHGIQRSHFDRCLCECQGFSGSTLPDPAPLSLLIRRLLFFYRHSEDTHRLISLCQS
VVKHHAQFVKLLAGPDRGTCVFQIKRLLGHCCRLLQLYQDDGGNVAVPMRMLEVFSSERT
YLPPLQDASAAAALTEQVSLYMVQKGYYRMLYVLANHKLPSSLDYSDAPSLPLAHTLLEH
TLRPLHFTYSSCPAGARQSVFSAFTEDFISPPFTEQIYHFFVPALTDPRLCFPFHDFLFS
LQATVSSSDRAQCHAPWLLYFVLSLGDTGLGSLSEEGLQLYLSALQSLLPLLPGSESLTR
ANANSDSEDEDDPSTHPRSVQNDNRLSLQLVTQLCVQKLDSKQQTNALLSLVWRDSASED
VFTMMASICHTLMVQHRVMVPRVRLLYSLAFNARFLRHLWHLITSMRTKMITGSLVPLLQ
LMSRGFPMSPEDSSKIIPLFYLFSSLFSHSLISIHDTEFFGEAMNGQKQASMMPFSLPEL
VTLSRCLRDACLGIIKLAHPETKSGHTEEYAAAFRSVRVKTSSQVQQRIQNQQKHWVQLF
KVITNLVKMLKARDIRRPFCPEGHWLSDEVNIRADTVTQLYVPSARHDWRTRLMSRILPL
QSTLDVPLEAPPLSVSEERHLAILTELPFVVPFEERVKVFQRLIDADKQDVQGRRPFLHN
INVTIRRNYIYEDAYDKLSPENEPDLKKRIRVHLLNAHGLDEAGIDGGGIFREFLSELLK
TAFNPNQGFFRTTNEGLLFPSPTAKMLIGDNFTRHYYFLGRILGKALYENMLVELPFASF
FLSKLLGTSADVDIHHLSSLDPEMYRNLLFLKSYEGDVEDLGLNFTIVNNDLGEAQVVEL
KPGGKDIPVTTANRIAYIHLVADYRLNKQIRAHCLAFRQGLANVLNLEWLCMFDQQELQV
LISGAHVPICLDDLKKFTNYSGGYSPTHPVIKIFWEVVESFGEEEKRKLLKFVTSCSRPP
LLGFKELYPAFCIHNGGNDLERLPTASTCMNLLKLPEFCDEQLMRNKLLYAIESSSGFEL
S
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcttcgagggagatttcaagcggacgcccaaagtgtcccttggaggggcgagt
aaaaaggagcagaaagcttcactgcttcaccgcacgcaggaggagaggcgcaagcgagag
gatgaaaggagaaggctgaaaagcgctgttgtcatccagtcttacatacgaggcttccag
gagaggaaacgacagcatggcattcagcgaagtcacttcgaccgctgcctgtgcgagtgt
cagggtttctccggatccacgctcccagaccctgcaccgctcagtctgctcatccgccgt
cttctcttcttctaccgccatagcgaggatacacaccggctgatctcgctgtgtcagagc
gtagtgaagcaccacgcccagtttgtgaagctcctcgccggacccgatagaggcacctgt
gtgttccaaatcaagaggcttctcggacactgctgcagactgctgcagctgtatcaggat
gacggcgggaacgtggcggtccccatgcgcatgctggaggtgttctcctcagagaggacg
tacctgccccccctacaggacgccagcgctgccgccgcgctcaccgagcaggtgtcgctc
tatatggttcagaaaggttactacaggatgctgtacgtcttggccaatcacaagcttccg
tccagtctggactacagcgacgccccctcacttcccctcgcacacacactgctggaacac
acactcagaccactgcactttacctacagctcctgtcctgccggcgcaagacagtctgtg
ttctcagccttcacagaggacttcatctctccccccttcacggagcagatctatcacttc
ttcgtcccggcgctgaccgaccccagactctgcttcccgttccacgacttcctgttctcg
ctgcaggccaccgtgtcctcgtcggaccgcgcccagtgccacgccccatggctcttatac
ttcgtactgtcgttaggggacacggggctcggctctctatcagaagagggtctgcagttg
tacctgagcgctctgcagtctcttctccctctgctccccgggagcgagagcctcaccaga
gccaacgccaacagcgactcggaggacgaggacgatccctccacacaccctcgttctgta
cagaatgataacaggttgtctctgcagttggtcacacagctgtgcgtgcagaagttggac
tcgaagcagcagacgaacgccctgctgtccctggtgtggagggactcggccagcgaggac
gtcttcaccatgatggcgtccatctgccacacgctcatggtgcagcaccgcgtgatggtg
cccagagtcaggctcctgtacagtttggccttcaacgcccgcttcctcagacacctgtgg
cacttaatcacgtccatgaggaccaaaatgatcacagggtctctggttccgttgctgcag
ttgatgtctcgcggctttcccatgtcccccgaggactcgagtaagatcatccccctgttc
tacctgttcagctctctgttcagccactcgcttatctccatccacgacaccgagttcttc
ggggaagccatgaacggtcagaagcaggcgtccatgatgccgttctccctcccggagctg
gtgactctgtctcggtgtctccgcgacgcctgtctggggatcatcaagctggctcacccc
gagaccaagagtggacacacggaggagtacgccgccgccttccgcagcgtccgcgtcaag
accagcagtcaggtgcagcagcgcatccagaaccagcagaaacactgggtccagctcttc
aaggtgatcacaaacctggtgaagatgttgaaggcgcgcgacatcaggaggccgttctgc
ccggagggacactggctgtcggacgaggtcaacatcagggccgacacggtgactcagctg
tacgtgccgtctgcgcgacacgactggaggacgaggcttatgagtcggatcttaccgctc
cagtccacgttagacgttcccttggaggctccgccgctgtccgtttcagaggagagacac
ctggccatcctcaccgagctgccctttgtcgttccctttgaggagagagttaaggtcttc
cagaggctgatcgacgctgataaacaggacgtacaggggcgcaggcctttcctacacaac
atcaacgtcaccatccggaggaattacatctacgaggacgcctacgacaaactgtctccg
gagaacgagcccgacctgaagaagcgcatcagggtgcacctgctgaacgctcacggcctg
gacgaggccggcatcgacggcggagggatcttccgcgagttcctcagcgagctgctcaag
acggccttcaaccccaaccagggcttcttcaggaccaccaacgagggtctgctgttcccg
agtcccacggccaagatgctcatcggcgacaacttcacgcgccactactacttcctggga
cggatactcggcaaggctctgtatgagaacatgttggtggagctgccgtttgccagtttc
tttctgtccaagctgctggggacgagtgccgatgtggacattcatcacctgtcctcgctc
gaccccgagatgtaccgcaacctcctgttcctcaagagctacgagggagacgtggaggac
ctgggtctgaacttcaccatcgtcaacaacgacctgggagaggctcaggtggttgagctg
aagccgggagggaaggacatcccggttaccacggcgaaccgcatcgcctacatccattta
gtggccgattaccggctgaacaaacagatccgcgctcactgcctggcgttcagacagggc
ctggccaacgtgctcaacctcgagtggctctgcatgtttgaccagcaggagctacaggtt
ttgatctccggtgcacatgtgcctatttgtctggacgacctgaagaagttcaccaattac
tcaggaggctactctcccacacaccctgtcatcaagatcttctgggaggtggtggagagc
ttcggtgaggaggagaaacgcaagctgctcaagttcgtcaccagctgctcacgtcctcct
ctgctgggcttcaaagagctctatcccgccttctgcatccataacggagggaacgacctg
gagcgtctgcccaccgccagcacctgcatgaacctcctcaaactgcccgagttctgcgac
gagcagctgatgaggaacaaactgctctacgccatcgagtcgtcctcgggcttcgagctc
agctga
DBGET
integrated database retrieval system
