KEGG   Clarias gariepinus (North African catfish): 128524218
Entry
128524218         CDS       T10780                                 
Symbol
chaf1b
Name
(RefSeq) chromatin assembly factor 1 subunit B
  KO
K10751  chromatin assembly factor 1 subunit B
Organism
cgar  Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cgar03036]
    128524218 (chaf1b)
Chromosome and associated proteins [BR:cgar03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     128524218 (chaf1b)
SSDB
Motif
Pfam: Beta-prop_CAF1B_HIR1 Beta-prop_WDR5 Beta-prop_THOC3 WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EML_2 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd EIF3I ANAPC4_WD40 Beta-prop_WDR3_2nd Beta-prop_Aladin CAF-1_p60_C WDR55 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st Beta-prop_Vps41 B-prop_COPA_B_2nd Beta-prop_SCAP Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_WDR41 Tricorn_2nd eIF2A Beta-prop_DCAF12 Beta-prop_HPS5
Other DBs
NCBI-GeneID: 128524218
NCBI-ProteinID: XP_053352641
LinkDB
Position
5:complement(13686499..13698804)
AA seq 617 aa
MKVVTCEIAWHNKEPVYSLDFQQNADGKIHRLATAGVDTTVRMWRVDMGPDGKAVVEFLS
NLARHTKAVNVVRFCPTAELLASGGDDAAILLWKINDNKEVEQAPTFQEEEDALLNKESW
NVVKTLRGHIEDVYDLSWTSDGNFLVSGSVDNTAIMWDIQKGQKICIFNDHKSYVQGVSW
DPLGQYISTLSCDRVMRVYSTHTKKKAYSVSKMTSGSAGEGEVKNFRMFHDDSMRSFFRR
LTFTPDGSFLLAPAGCVETGENVTNTTYVFSRKSFKRPIAHLPCPGKATLAVRCCPVFFE
LRAKKLEDGSVQPLSNAFQLPYRLVFAVASEDSIFFYDTQQTVPFGYVSNIHYHTLSDLS
WSRDGSFLAVSSTDGYCSFVSFDELELGTPLKERPQLDIITPLTASEKKGKRTSGSGRTA
SPVPRTNPSPVTQEKETSATPEEKRTPQGLKTKSQPRRITLNTLEGWSKPSTPKSPATPT
APPSSSQSTPKSAPSTPLANRGPLTPKTTQSTSSTPLAPISARNSTTPKGPTPRRISLTS
LTPRAPASLQNVVAPSSTEKAKHERPSPPNDPVCKPPESKRPKTDEASGLSSSSSSSSST
SPSNEASVESISKPMDS
NT seq 1854 nt   +upstreamnt  +downstreamnt
atgaaggtggtaacgtgtgaaattgcctggcacaacaaggagccagtatacagtctggat
tttcaacagaatgctgatggcaaaattcatcgcctggccacagctggagtggacaccaca
gtgcgcatgtggcgtgtagacatggggcctgatggaaaagctgtagtggaatttttgtca
aatttagcaagacatacaaaagcagtgaatgtggttcgcttttgtccaactgctgagctg
ctggcatctggaggagacgatgcagccattttattatggaagattaacgataataaagag
gtcgagcaagccccaactttccaggaggaggaggatgctctgctgaacaaggaaagctgg
aatgtcgtcaagaccctcagggggcacattgaggatgtatatgacttgtcatggacaagc
gatgggaatttcttggtttctggctctgtggacaacactgccatcatgtgggatatacag
aagggtcagaagatatgcatctttaatgaccacaagagctatgtgcagggtgtatcctgg
gatccactgggtcaatatattagcacacttagctgtgatagagttatgcgtgtatacagc
acgcacacaaagaaaaaggcctacagtgtgagtaaaatgacatcaggctctgctggagag
ggagaggttaagaacttcaggatgtttcacgatgacagcatgcgatccttcttcagacgc
ctcacctttacacccgacggctccttcctcctggcgcccgctggttgtgtggagacagga
gagaacgtcacaaacaccacttatgtcttctccagaaagagcttcaaaagaccaatagct
catcttccctgtcctggtaaagcaactcttgctgtgcggtgctgccctgtgttctttgag
ctcagagccaagaagcttgaagatggatcagtgcagccgctgtccaacgcctttcagctg
ccgtatcgcttggtgtttgctgtggcttctgaagattccatctttttttacgacactcag
cagaccgtgccatttggttatgtgtccaatatccactaccacacccttagtgatctcagc
tggtctcgtgacgggtcattcctggctgtctcgtccacggatggatactgctcttttgtg
tcctttgatgagctggagcttgggacgcctttaaaagagcgaccgcagctggacatcatc
accccgctcactgccagtgagaaaaagggcaaaagaacatcaggtagcggacggacagct
tcacccgtgccccgcaccaatccttcacccgtcacacaggagaaagaaacatcagctacc
cctgaagagaaacgaacaccgcaaggcctgaagactaaatcacagcctaggcgcattacc
ctcaacacactggagggatggagcaagcccagtaccccaaaatctcctgccacacccact
gcccctccctccagcagtcagagcacccccaaatctgcgccgtccactcctctggccaat
cggggaccgcttactcccaaaactacccaaagtacctccagcaccccacttgctcccatc
agcgccagaaactccacaacgcctaaaggacccacccctaggcgaatttctctgacatca
cttacacccagagctccagcttccttgcagaacgttgtagctccatcctccactgagaaa
gccaaacatgagagaccgtctcctcctaacgatccagtgtgcaagcctcccgaatccaag
cgacctaaaactgatgaagcatcaggtctgagtagcagcagcagcagcagcagcagcact
tctccaagcaatgaggcctcagtggagtccatcagcaagcccatggattcctga

DBGET integrated database retrieval system