Clarias gariepinus (North African catfish): 128524224
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Entry
128524224 CDS
T10780
Symbol
lss
Name
(RefSeq) lanosterol synthase
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00100
Steroid biosynthesis
cgar01100
Metabolic pathways
Module
cgar_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
128524224 (lss)
Enzymes [BR:
cgar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
128524224 (lss)
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Motif
Other DBs
NCBI-GeneID:
128524224
NCBI-ProteinID:
XP_053352649
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Position
5:complement(29112414..29122991)
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AA seq
753 aa
AA seq
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MYINYVQLHSAKMTEGTCVRRRGGPYKTAAVTELTRWRLSNVEGRQTWRYLEDGDTEERE
QNFLEAHSVGLDTSKFVPACPVAQTVIEAAQKGMEFYSRLQAEDGHWAGDYGGPLFLLPG
LLITCHVAKISLPEAWKKEMVRYLRSVQLPDGGWGLHIEDKSTVFGTALSYTTMRILGVG
PDDPDMVRARNNLYSKGGAVGIPSWGKFWLAILNVYSWEGMNTLFPEMWLFPTWMPAHPS
TLWCHCRQVYLPMSYCYAVRLSAQEDALVRSLRQELYIQNYSTINWQDQRNNVAASDLYT
PHSSLLTAAYSILNLYEAHHSTALREKAVKELYDHIQADDRFTKCISIGPISKTINMLVR
WHKDGPTSAVFLEHVARIPDYLWLGLDGLKMQGTNGSQLWDTAFAVQAFLEAGAQSDPRF
KQCLTKAHQFFNLTQIKENPPDYKKYYRQMNKGGFPFSTRDCGWIVADCTAEGLKSVMLL
QEQCSFITDHIPKQRLFDAVNVLLSMRNSDGGFATYETKRGGKLLELLNPSEVFGDIMID
YTYVECTSAVMQALQHFHHIYPEHRAQEIRSTLLQGLDYCRRIQRPDGSWEGSWGVCFTY
GVWFGLEAFACMGHIFQDGYDGPVCPEVRRACDFLLSKQMEDGGWGEDFESCEQRCYTQS
KNSQIHNTCWALLGLMAVRYPDCKVIEQGIKVLIDKQLPNGDWPQENISGVFNKSCAISY
TSYRNVFPVWTLGRFLRLYPSSLLAQKLGSTER
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaactatgttcaactacacagtgcaaagatgactgaaggaacgtgtgtgcgt
agaagaggggggccctataagactgcagcagtgacagagctgacccgctggaggctcagt
aatgtggagggacggcagacatggagatacctggaggatggagacactgaggagagggag
cagaacttcttagaggctcactctgtgggacttgacacaagtaagtttgttccagcctgc
ccggtggctcagacagtgattgaagctgctcagaaaggcatggagttttacagccgtctc
caggccgaggatggccactgggctggagattatggaggaccacttttcttgcttccaggt
ctcctcataacttgtcatgttgctaagatctctttaccagaagcctggaagaaggagatg
gtgaggtatctacgctcagtacagctgccagatggtggctggggtctccatatagaagac
aagtcaacggtatttggtacagctctcagttacaccacaatgagaatcctgggagttgga
cccgatgacccagatatggtgcgggcaagaaacaacttatatagcaaaggaggtgctgta
ggtataccgtcctggggaaagttctggttggccattctcaatgtgtacagttgggaaggg
atgaacacactcttcccagagatgtggctgtttccaacttggatgcctgcgcacccatca
actctttggtgccactgcaggcaggtctaccttcccatgagctactgttatgctgtcagg
ttgtctgcacaggaggacgcgctggtgcgcagcctgagacaggagctgtacatccaaaac
tattcaactattaactggcaagatcaaagaaacaatgttgccgcgtcagacttgtacacc
cctcacagcagtctgctcaccgccgcctactctatcctgaacctgtatgaggctcatcac
agtactgcactgagagaaaaagctgtcaaagaactgtacgatcacatccaagcagacgat
cgctttacaaagtgcattagcatcgggccgatctcaaaaaccattaatatgttggtgcgc
tggcacaaggatggacccacatcagctgtctttctggagcatgtggcgaggatcccagac
tacctctggctaggtcttgatggcttgaagatgcagggaaccaatggatctcagttatgg
gacactgcctttgctgtacaagcctttcttgaggcaggtgcccagagtgaccccaggttt
aaacagtgtttaacgaaggcccaccaattctttaatctaactcagattaaagaaaatcca
cctgattataagaagtattacagacaaatgaacaagggaggcttccccttcagcacacgt
gactgtggttggattgtagctgactgcacagcagagggtctgaagtcggtgatgttactg
caggagcagtgcagcttcatcacagatcacattcccaaacaaagactctttgatgcagtc
aacgtgcttttaagcatgagaaactctgatggtggcttcgccacatacgagaccaaacgt
ggaggaaaactgctggagctgctcaacccgtctgaggtgtttggtgatatcatgatcgac
tacacctatgtggagtgcacgtcggcagtgatgcaagctctgcaacactttcatcatatt
tatcctgagcacagagcacaggagatcaggagtactcttctgcagggacttgactactgc
agaaggattcaaagacctgatggatcatgggaagggtcatggggtgtttgctttacatat
ggagtatggtttggattggaggcttttgcatgcatgggtcatattttccaggatggatac
gatgggccggtgtgtcctgaggtgaggcgtgcctgtgacttcctgctttctaagcagatg
gaggatggaggctggggagaggactttgagtcgtgtgagcagcggtgctatacacagagc
aaaaattcccagatccataatacctgctgggctctgctgggtctgatggctgtcaggtat
cctgactgcaaagtcattgagcaaggaataaaggtcttgattgataagcagcttcctaat
ggagactggccccaagagaacatctctggtgttttcaacaagagctgtgctatcagttac
acatcctatagaaatgtgtttccagtttggactctgggccgtttcttgcgcctctacccc
tccagcttactggctcagaagctgggaagcaccgagagataa
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