Clarias gariepinus (North African catfish): 128524272
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Entry
128524272 CDS
T10780
Symbol
upf3a
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03013
Nucleocytoplasmic transport
cgar03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
128524272 (upf3a)
mRNA cycle factors
P-body specific factors
128524272 (upf3a)
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NCBI-GeneID:
128524272
NCBI-ProteinID:
XP_053352735
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Position
5:21306105..21313851
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AA seq
482 aa
AA seq
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MRAEKEPTTGSRERGVVEIQLRDAHREQDSAAANLKHKEEKKEIFTKVVIRRLPPSLSKE
QLEEHLSPLPSYDYFEFFPADQSLYPHLFSRAYINFKNPEDIVLFRDRFDGYVFIDNKGQ
EYPAIVEFAPFQKVSKKKLKKKDAKAGSIEEDPEYRRFLENYSCDEEKSMANPETLLGEI
EAKTRELIAKRTTPLLEYIKNKKLEKQRIREEKREERRRRELEKKRQREEEKRKRREEER
RKRKEAEKQKKLSEKDIKIKLLKKCDRDDEVESDRLKDKGDSGETERNKWDKSSGHTKAK
EPKDSRVQLESDKEQRDGHSRRQRDKDQRCREEERKRQRHHYEFDKFMRRKEETKWGKGY
CHDRAKKDGHHHGYSYCPEMGDKSSKEDRDEMGSRKERIRNKSVLVHQEKRTSQSEGPDQ
IGGALPAKDRPAMQLYQPGARNRKHVGSGNKGFDFSRLSPEPISEPCYELTIGTGSEKSG
DE
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagggctgagaaggagccgacaacgggaagcagagagagaggcgtcgtcgagatacag
ctgagagacgctcacagggagcaggacagcgccgcggccaatttaaagcacaaagaggag
aaaaaggaaatcttcaccaaggttgtgattcgacgtcttccaccgagcctatcaaaagaa
cagcttgaggagcatctcagtccactaccttcttatgactattttgagttttttcctgca
gatcaaagcctatatccacatcttttctccagagcatacatcaactttaaaaacccagag
gatattgttctattcagagatcgtttcgatggttatgtttttattgataataaaggtcaa
gagtatccagcaattgtagaatttgcaccatttcagaaggtttccaagaagaagctcaag
aaaaaagatgccaaggccggaagcattgaagaagatccagaatacagaagatttctggag
aactactcatgtgatgaggagaagtcaatggccaatccagaaacactgttgggagaaatt
gaggctaaaacaagagagctaatagctaaacggacaacaccacttctggaatatattaag
aacaagaagttggaaaagcagagaattcgggaggaaaaaagggaggagaggagacgccgg
gaactagaaaagaaacgccaaagggaagaggagaaaaggaaacggcgagaagaggagagg
cgaaaacgcaaagaagcagagaagcagaagaagctgtctgaaaaggatatcaaaattaag
cttttaaagaaatgtgacagggatgatgaggtggaatcagacagactaaaagacaaagga
gacagtggagaaactgagaggaacaagtgggacaaatcctcaggtcacactaaggcaaag
gaacctaaagacagtagagttcagctagaaagtgataaggagcagcgggatggccacagt
cgccgacagagagataaagatcagaggtgcagagaagaggagcgcaagcggcaacggcat
cattatgagtttgacaaattcatgcggcgcaaggaggagaccaaatgggggaaaggctac
tgtcatgaccgggcaaagaaagatggccatcaccatggctactcctactgcccagagatg
ggggataagtcaagcaaggaggaccgggatgaaatggggagcagaaaggaacgtatacgt
aataagtctgtattagtgcatcaggagaaaaggacctcccagtctgaggggccagaccag
ataggaggggctctgccagccaaggaccgacctgccatgcagctgtaccagccaggagcc
cgtaaccgtaagcatgtggggtctgggaacaaaggctttgacttcagccggctctctcca
gagccaatcagtgaaccctgctatgagctgaccataggaacaggctctgagaaaagtgga
gatgagtga
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