Clarias gariepinus (North African catfish): 128524286
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Entry
128524286 CDS
T10780
Symbol
gabpa
Name
(RefSeq) GA-binding protein alpha chain
KO
K09441
GA-binding protein transcription factor, alpha
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128524286 (gabpa)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
128524286 (gabpa)
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Gene cluster
GFIT
Motif
Pfam:
Ets
GABP-alpha
SAM_PNT
ubiquitin
Motif
Other DBs
NCBI-GeneID:
128524286
NCBI-ProteinID:
XP_053352761
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Position
5:complement(21235869..21241134)
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AA seq
456 aa
AA seq
DB search
MSKSETEEMIEIEIDGQEKQECLEEGIEEQTITASDLITQDIDINEPVGNLKKLLEPRLQ
IALDGYDICLQDIHLHPDHSLFDQGVKTDGTVQLSLQIVTKPGEEKLNILEIVKPVETVE
VVIDPDAAAGEEAHLVEDGQVIAVERAAIADETSEQVTRWAAALEGYRKEQVRLSIPYDP
VQWTADQVIHWAVWVMKEFNIEEIEVGGIHIPGRQLCAFSQEEFLQRVPNGEILWSHLEL
LRKYVLASQEQGQEATVTIDQPVQIIPAPVQQATPTTIKVQKHNKVPRAPRISGEERSSP
GNRTGNNGQIQLWQFLLELLTDKDARDCISWVGEEGEFKLNQPELVAQKWGQRKNKPTMN
YEKLSRALRYYYDGDMISKVQGKRFVYKFVCDLRTLIGYSAAELNSLVTECEQKKLARVQ
LHGIGQPVNTVALATAAGQPVTTVTLATAATLEKDS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaagtgagactgaggagatgatcgagattgagattgatggccaagaaaaacag
gagtgcctagaagaagggatagaggagcagaccatcacagctagcgatctcatcactcag
gatattgatatcaatgagcctgtcgggaatttgaagaagttgttggagccccgcctgcag
attgctctggatggatatgatatttgtctgcaggacatccatttacaccctgaccacagc
ctttttgaccaaggtgtgaagactgatggcacagtgcagctcagtctgcagattgtcaca
aaaccaggtgaggagaagttaaatatacttgagattgtgaagccagtagagactgtggag
gtggtgatagatcctgatgcagcagctggagaggaggctcacttggtggaggacggtcag
gtgatagcggtggagcgagctgcaattgcagatgagacctctgaacaggtgacccgatgg
gcagctgcactcgagggttaccgcaaggagcaggtccgacttagtattccatatgacccg
gtgcagtggacggcagatcaggtgatccactgggcagtgtgggtgatgaaggagttcaac
atcgaggagattgaagtgggaggcatccacataccaggtcggcaactgtgtgccttcagc
caagaagagtttctccagagagtgcccaatggagagatcctatggagccacctagagctt
ctgcgcaaatatgttctggcaagtcaggagcagggacaagaagctacagtcactattgac
cagcctgtgcagatcatccctgcgcctgtacaacaagccacacccacaactattaaggtg
cagaagcataacaaagtgccccgagcgccacgcatctctggagaggagcgcagttcccca
ggcaaccgtacaggtaataatgggcaaattcagttatggcagttcctgctggagctgctg
actgataaggatgcgagggactgcatttcctgggtcggagaggagggcgaattcaaactt
aaccagcccgaactggtggctcagaaatggggtcagagaaagaacaaacccacaatgaac
tatgagaagctcagcagagccctcagatactactatgatggagacatgatcagcaaagtg
caaggcaagcgcttcgtctacaagtttgtgtgtgacctgaggactctgatcggatacagt
gctgctgagctcaacagtctggtgactgagtgcgaacagaagaaacttgcacgagtgcag
ctacacggcatcgggcaacctgtcaacacagttgccctggcaacggctgcaggacagcca
gtcaccacagtcacgctggccactgctgccacattggagaaggacagctga
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