Clarias gariepinus (North African catfish): 128524300
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Entry
128524300 CDS
T10780
Symbol
shox
Name
(RefSeq) short stature homeobox protein
KO
K09331
short stature homeobox protein
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128524300 (shox)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
128524300 (shox)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
OAR
MRP-L20
CCDC53
AcrF31
Motif
Other DBs
NCBI-GeneID:
128524300
NCBI-ProteinID:
XP_053352783
LinkDB
All DBs
Position
5
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AA seq
302 aa
AA seq
DB search
MEELTAFVSKSFDQKSKESSKESITYREVLESGLARARELGNSESSLQDITDSNTHCPVH
IFKEHVELDKDKLKEFNVGRASDGIYECKEKKEEVKSEDEDAQGKLKQRRSRTNFTLEQL
NELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGSAS
HLDACRVAPYVNMGALRMPFQQVQAQLQLEGVTHSHPHLHPHLAAHAPYLMFPPPPFGLP
IASLADSASAAAAVAAAAKSNSKNSSIADLRLKAGLLGGHWLSPFQAQITAPGPYKNIWM
SV
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggaagagctcacagcgttcgtgtcgaaatccttcgaccagaagagcaaggagagcagc
aaagagagcatcacgtacagggaagttttggagagcggtttggcgcgggccagggagcta
ggaaactcggagagcagcctacaggacattaccgatagcaacacgcactgtcccgtgcat
atattcaaggaacacgtggagctggacaaggacaagctgaaggagtttaacgtaggcagg
gcgagcgacgggatttatgaatgcaaagaaaagaaagaagaggtgaaatcggaggacgag
gacgcccagggtaaactgaaacagagacggagcaggacaaattttaccttagagcaactg
aatgaactggagcgcttgtttgatgagacacattacccggacgcgttcatgcgagaagag
ctgagccaaagactgggactctccgaggccagggttcaggtatggtttcaaaacagaaga
gcaaaatgcagaaaacaagaaaatcagatgcacaaaggtgtgattttgggctccgctagt
cacttggacgcatgcagagtcgctccctacgttaacatgggcgccctgagaatgccattt
caacaggtccaagcgcagctccagctggagggggtgacccactcacatcctcacctacac
ccccacctggcagcacatgcaccctacctgatgttccctcctccaccgttcggactacca
atcgcctcactggcagactcagcctcggcagcggctgctgtagcagcggctgccaagagc
aacagcaagaactccagcatcgctgacctgcgactcaaggcaggactgcttggaggccac
tggctcagccctttccaggcccagatcacagccccaggaccatacaaaaatatctggatg
tctgtctga
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