KEGG   Clarias gariepinus (North African catfish): 128524367
Entry
128524367         CDS       T10780                                 
Symbol
tank
Name
(RefSeq) TRAF family member-associated NF-kappa-B activator isoform X1
  KO
K12650  TRAF family member-associated NF-kappa-B activator
Organism
cgar  Clarias gariepinus (North African catfish)
Pathway
cgar04140  Autophagy - animal
cgar04621  NOD-like receptor signaling pathway
cgar04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    128524367 (tank)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    128524367 (tank)
   04622 RIG-I-like receptor signaling pathway
    128524367 (tank)
SSDB
Motif
Pfam: TBD DUF3450 TPR_MLP1_2 THOC7 CCDC113_CCDC96_CC DUF641 DUF7310 ALIX_LYPXL_bnd DUF3698 Fib_alpha Prefoldin MIP-T3_C HIP1_clath_bdg TMPIT OmpH Muted
Other DBs
NCBI-GeneID: 128524367
NCBI-ProteinID: XP_053352883
LinkDB
Position
5:26414062..26424128
AA seq 345 aa
MDRNIGDPLNKAYEAYRNISIENENAKKLLQEKTEQYQRHTQQLEKKIEEQKQEISDLKA
QLHSIKHGSGEVKCCETAHRKQETERLSPNIQWPSNSSTPHRTNYILVKKESQEFTPMHP
HSMSGVSGMKTEDVLDTLQEIQGTFQRIQTLAKRQKDHLKRIHKGSDAASAEQQFSMPIQ
CTDDTSEQVEGHFSTPSRPEVDEALPSGALASRGASPEDGDFMNNIKFPPPTDSEFEFLH
SAPDRSVSLPVHKKDLTEPITTELEEESFSSFSVSPPTSHLLCATTSHEGIRGPQQPLWS
PGLIPDIASEESSMGSAHCTFCKATVPSTLMYSHLNSHFQDKADD
NT seq 1038 nt   +upstreamnt  +downstreamnt
atggaccgaaacattggtgatccgctgaacaaagcctacgaagcctaccgcaacatctca
attgagaatgaaaatgccaaaaagctgctacaagaaaagacagagcaatatcaacggcat
acacaacaactggagaaaaagatagaagagcaaaagcaagagatttcagatctcaaagca
caattacattcaataaagcatggttcgggggaagtgaaatgttgcgagactgcacacaga
aaacaggaaacagaaaggttatcacctaatattcagtggcctagcaactcctctactccc
cacaggactaactatatcctggtgaagaaagaatcccaggaatttacaccaatgcatccc
cattcaatgtctggagttagtggcatgaagactgaggatgttctagacacgcttcaggaa
atccaggggactttccagaggattcagactcttgcaaaacggcagaaagatcacctgaaa
agaatacacaaaggaagtgatgctgccagtgcagagcaacagttctccatgcccatccag
tgcaccgatgacaccagcgaacaagttgaagggcacttctccaccccttcaaggccagag
gtggatgaagccttgccctcgggtgcactagcatcacgcggtgccagcccagaggatggt
gactttatgaacaatattaagttcccaccacccacagatagtgaatttgaatttctgcat
agtgcaccagacaggagtgtgtcacttccagtgcacaagaaagaccttacagagcccatt
accacagagctggaagaggagtccttctcctcattctctgtttctcctccaacatcacac
ctgctgtgtgcaaccacatcacacgaaggaatccggggaccacaacagcctctgtggagc
cctggtctaatccctgatattgcatcggaagaatcaagcatgggatctgctcactgtact
ttttgcaaggctactgttcccagtaccctcatgtacagccacctcaattcacacttccag
gacaaagcagatgattga

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