Clarias gariepinus (North African catfish): 128524378
Help
Entry
128524378 CDS
T10780
Symbol
itga6a
Name
(RefSeq) integrin alpha-6 isoform X1
KO
K06485
integrin alpha 6
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04382
Cornified envelope formation
cgar04510
Focal adhesion
cgar04512
ECM-receptor interaction
cgar04514
Cell adhesion molecule (CAM) interaction
cgar04518
Integrin signaling
cgar04810
Regulation of actin cytoskeleton
cgar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128524378 (itga6a)
04514 Cell adhesion molecule (CAM) interaction
128524378 (itga6a)
04518 Integrin signaling
128524378 (itga6a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128524378 (itga6a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128524378 (itga6a)
04810 Regulation of actin cytoskeleton
128524378 (itga6a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
128524378 (itga6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128524378 (itga6a)
04515 Cell adhesion molecules [BR:
cgar04515
]
128524378 (itga6a)
04090 CD molecules [BR:
cgar04090
]
128524378 (itga6a)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128524378 (itga6a)
Exosomal proteins of breast milk
128524378 (itga6a)
Cell adhesion molecules [BR:
cgar04515
]
Integrins
Integrin alpha subunits
128524378 (itga6a)
CD molecules [BR:
cgar04090
]
Proteins
128524378 (itga6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
VERL_C
LRR19-TM
Motif
Other DBs
NCBI-GeneID:
128524378
NCBI-ProteinID:
XP_053352907
LinkDB
All DBs
Position
5:complement(24256187..24276727)
Genome browser
AA seq
1094 aa
AA seq
DB search
MEISELRISFNVRVLLLLLLWAGARAFNLDTKNVLRKNGDPGSLFGFSVALHRQLHPVDK
RILLIGAPRAKALPNQLANITGGLYNCDITTHMDDCNRIEFDNDADMRVESKENQWMGVT
VQSQGPGGKIVTCAHRYQRRLFVNTPQESRDITGRCYVLSQDFSIDGQSDEDGGNWKFCE
GRARGHERFGACQQGLAATFTKDYHYVIFGAPGAYNWKGIVRVEQKNNTLLEMGFYDDGP
YEVGDESRLDPELVPVPANSYLGFSLDSGHSITEKGKLIVVSGAPRANHSGAVVLLRKEG
EVSTMLSPEYVLQGPGLASSFGYDVAVVDLNADGWQDIVVGAPQFFQKDGEVGGAVYVYI
NKAGKWNAVVPTRLNGTKDSMFGLAVENIGDTNLDSYEDIAVGAPYADAGSGRVYIYHGA
AYGINTKPAQILEGRPHGINMFGYSLAGNMDLDDNSYTDLAVGSLSDAVFVYRARPVISI
KMEIKVTPKEIDLTKKTCGNSICLNVDVCFTYKANPVTYNPKLTISYVLETESQRRKQGL
HSRVSFLDKKPTDQDFQSTGMLELRGQNKKTCHKVKLRLQENIKDKLRAIPIEVSCAIES
AKRGKGSTSLPDLVPVLDSNIPNKTSTEVNFLKEGCGSDNICQSNLQLQYRFCYRESNQD
IFPPLPMKNDIAVVSLSDQKDIALEVTVKNRNGDDAHEAKLTGWFGDSLSYSGFRSQKTT
EKHVICAANQNGSQVDCELGNPFKRDSEVTFYIILSTARISLHTTEVEVDLKLETTSLQG
GLERVRAKAKVKIELLLSVQGVAKPSQVYFGGNIRGESAMKSEEEVGSLIEYEFRVMNLG
KPLKSYGTAYINIQWPKESAVGKWLLYLVKITSKGLEKINCLPENEINPNSLIEGSTFSR
RKRQTEPSRTSEGTKISLFTDKRKHKTLSCAGDAKCVDIKCPLQGLDSSAHIVLRSRLWN
TTFLEDYASYNYLELIVKASISLDVSAKNIVLKNPETQVRLTIFPEDTVAHYGGVPWWII
LVAVLVGILMLSLLVLLLWKCGFFKRSKYDDSIPKYHAVRIRKETRHFSDENMMFDPFEK
KQWMTTWSENESYS
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atggagatttctgaactgaggatttcttttaatgtgcgggttttgctgcttttgctccta
tgggcaggtgcacgcgcatttaacttggacacaaaaaacgtgttgaggaagaacggggat
cctggcagcctctttggtttctctgtcgcactgcaccggcaactccatccggtggataag
agaatacttcttattggagctcccagggccaaagctttacctaatcagcttgcgaacatc
actgggggtttgtacaactgtgacatcaccactcatatggatgactgcaatcgtattgaa
ttcgacaacgatgctgatatgcgtgtggagagtaaagagaatcagtggatgggggtgacg
gtgcagagtcaggggccaggaggaaagattgtgacttgcgcccaccgatatcaacggcgg
ctgtttgtgaacacaccacaggagtcacgggacattactggccgttgctacgttctcagt
caggattttagtattgatggccagtcagatgaagacggtggcaactggaaattttgtgaa
ggtcgtgccaggggtcacgagaggtttggtgcctgtcagcaaggtttggctgcaactttc
accaaagactaccattacgtcatctttggagccccaggagcgtacaactggaaaggtata
gtccgagtagagcagaaaaacaacactctcctggaaatgggtttttatgatgatggccca
tatgaggttggggatgaaagccgtttggatccagaactcgttcctgtccctgctaacagt
tacctaggtttctctctggattctggccacagcattactgagaagggcaaactgattgtg
gtgtctggagcaccgagagccaatcacagtggcgcagtggtgctgctgaggaaggagggg
gaggtgtccaccatgctgtcgcctgagtatgtcctacaaggacctggacttgcctcttca
tttggatacgatgtggcagttgtggatcttaatgcagatggatggcaggacattgtggtg
ggagctcctcagttctttcagaaagatggtgaggtaggaggagcagtctatgtctacatc
aacaaggctggaaagtggaatgccgtcgtccccacccgcctcaatggaactaaagactca
atgtttggattggcggtggagaatattggggacaccaatctggattcctatgaagatatt
gcagtgggtgctccttatgccgatgcaggctctggtagagtgtacatctatcatggagca
gcttatggcattaacaccaaaccagctcagatcctggaaggtagacctcatggcataaac
atgtttggctattcattggctggaaacatggacttggatgacaactcctacacagatctt
gctgttggctctctgtctgatgctgtgtttgtatacagggccagacctgtcatcagtata
aaaatggaaatcaaggttacaccaaaggaaattgacctgacaaagaaaacgtgtggaaac
agtatttgcttaaatgttgacgtctgctttacctataaagcaaatcctgttacttacaac
cccaaactgaccatttcctacgtgcttgagacagagtcacaacgcagaaagcaggggttg
cactctagggtgtccttcctggacaaaaagccaactgatcaagatttccagtctacaggc
atgctagagctaagagggcaaaacaaaaaaacttgtcacaaagtcaaactccgactgcag
gagaacatcaaggataaactgagagcaatacccattgaggtttcctgtgccatcgagagt
gccaagagagggaaaggttcgacttcattaccagacctggtacctgtattggactcaaat
ataccaaacaagaccagcactgaagtgaactttctgaaggagggctgtggttctgacaac
atatgtcagagtaatctgcagctccagtacagattctgttacagagaatccaaccaggac
atatttcctccattacctatgaagaatgatattgcagtggtatcattgagtgaccaaaaa
gacattgctctggaggtaacagtgaagaatagaaatggagatgatgctcatgaagccaaa
ctaacaggatggtttggtgattcgctttcatattctggattcagatctcagaagactaca
gaaaagcatgtgatctgtgcagccaatcagaatggctcacaagtggactgtgaactgggg
aacccattcaaacgtgattctgaagttactttttacattatcctgagcactgcgaggatc
tcactgcacaccactgaggttgaggttgacctcaagctagagacgacaagtctgcagggg
ggattagagagggtgagggctaaagccaaagtcaagattgaactgctgctatcagtgcaa
ggagttgccaagccctcacaggtgtattttggtgggaatatcagaggagaaagcgccatg
aagtcagaggaagaagttgggagtttgattgaatatgaatttagggtaatgaatttaggc
aagccactgaaatcctatggtacagcctacatcaatatccagtggcctaaagaaagtgcg
gtggggaaatggcttctgtatcttgtgaagatcacatcaaaggggctggaaaagatcaac
tgcttaccagagaatgagatcaacccaaacagcctgattgaaggatccacattctcaaga
aggaagcgtcagacagagccaagcaggacatctgaagggaccaaaatatcgctcttcaca
gataaaagaaaacacaaaacactgtcatgtgctggggatgcgaaatgtgtggacatcaag
tgccctctacagggactagacagtagtgcacacattgtactgaggtctcgcctttggaac
acaactttccttgaagattatgcctcatataattatcttgaattgatagtgaaagcctca
atcagtcttgatgtttctgctaagaacattgtgctgaaaaatcctgagacacaggtgaga
ttgactatcttccctgaagatacggtggctcactatggtggagtgccatggtggataata
ctagtggctgtattagtgggaatactgatgctttctctgctagtacttctactctggaag
tgtggatttttcaaacgttccaagtatgatgacagcattccgaagtaccatgcggtaagg
attcgtaaggagacacgccacttttcagatgaaaacatgatgtttgatccatttgagaag
aagcaatggatgactacatggagtgagaatgaaagttactcctga
DBGET
integrated database retrieval system
