Clarias gariepinus (North African catfish): 128524383
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Entry
128524383 CDS
T10780
Symbol
htr1fa
Name
(RefSeq) 5-hydroxytryptamine receptor 1F
KO
K04153
5-hydroxytryptamine receptor 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04080
Neuroactive ligand-receptor interaction
cgar04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128524383 (htr1fa)
04082 Neuroactive ligand signaling
128524383 (htr1fa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cgar04030
]
128524383 (htr1fa)
G protein-coupled receptors [BR:
cgar04030
]
Rhodopsin family
Biogenic amine
Serotonin
128524383 (htr1fa)
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Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7tm_4
Motif
Other DBs
NCBI-GeneID:
128524383
NCBI-ProteinID:
XP_053352920
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All DBs
Position
5
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AA seq
368 aa
AA seq
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MDPNGTDGANSADGLSSSPAGMILLSLTLSALALLTTAINSLVITAIIVTRKLHHPANYL
ICSLAVTDLLVAILVMPFSIIYIMKETWVMGDVMCTIWLSVDITCCTCSILHLAAIAVDR
YQAITDAVEYSRKRTSLRAAITISVVWLLSILISLPPMLWGHHNKGENQTECLIRHENIA
FTLYSTFGAFYIPLILILILYYKIYQAAKILYHKRRPSPMNKLDINGHKIPMCFDREQQS
QDALTLPEKSMSEPSTEGDRRRISVASPNFQSHIERSIKRQRISGARERKAAMTLGLILG
AFVICWLPFFIQEVISNICGSCILSNKLITFLTWLGYLNSLINPLIYTIFNEDFKNAFYK
LIMCQHEL
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggatccaaatggcacagatggggccaattctgcagacggacttagcagtagtcctgca
ggcatgatccttctctcgcttactctgtctgcactggctctacttaccacagcaatcaac
tctttagtcatcactgccatcattgtcactcgcaaacttcaccaccctgccaactacctt
atttgctctctggctgtgacggacctgctggtggccattttagtcatgccctttagcatc
atttacatcatgaaggagacatgggtcatgggtgatgtgatgtgcaccatctggctcagt
gttgacataacctgctgcacatgctcaattttgcacctggcagctattgctgtggatcgt
tatcaggctatcacggatgctgttgaatattccagaaagaggacgtctctaagggctgct
attacaatcagtgttgtgtggctcctgtccattctcatttccctacctccaatgctctgg
ggacaccacaacaaaggagaaaatcaaaccgaatgcttaataaggcatgaaaacattgct
tttacactttattccacatttggggccttctacattccccttatactcattcttatcctt
tactataaaatataccaagcagctaaaattctttaccacaaaaggaggcccagtcccatg
aacaagcttgacataaatggacacaaaatccctatgtgctttgacagagaacagcagagc
caagatgcactcacactaccagagaaatcaatgtcagaaccctctacagaaggtgacagg
agacgcatctcagtagcaagcccaaattttcagtctcatattgagaggtccatcaaaaga
cagcggatttcaggggcacgagaaagaaaggctgctatgactctgggactaattcttggg
gcatttgtaatctgttggctacccttctttattcaggaagtgataagtaacatctgtggc
agctgcattctctcaaataaattaattacatttctgacctggctaggataccttaactca
ctaattaatccactcatttataccatcttcaatgaggacttcaagaacgccttttataaa
ctgatcatgtgccagcatgaactttga
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