Clarias gariepinus (North African catfish): 128524425
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Entry
128524425 CDS
T10780
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3
KO
K15195
AF4/FMR2 family member 3
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgar03021
]
128524425 (aff3)
Transcription machinery [BR:
cgar03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
128524425 (aff3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
128524425
NCBI-ProteinID:
XP_053352967
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All DBs
Position
5:complement(17980155..17997867)
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AA seq
1168 aa
AA seq
DB search
MTHSWPSQQPPGGGGTERFLYSDSKEGKRHNTQHKQVRNDAPIRMPRVAPHKSMLADDLK
LSSDEDDSDKGPHQNASWSENHNLSGQYIHTHGRRARHSSSGSSGSDSSSESGSSSQRSR
SPSPEAQTQPEIPSQPLPLTFSKENQHPSLTHWQLDKWLEKVHKTRPSDHDPGGGHSSSA
GFDSDRGPSPGRYWDRDSGLGTRGSYSPSQSPVPSPKFDYSPRHSHGSSPGYSPCPSPGI
TPVPSPVPSVCPSPGASLRISRSPSPLPPHPPKSPSLPSAPASPRITSYTQVQQESSRLS
TQAPYTSSPVRQPKVRPWLPPDHNTQRINNSRQKDSRQPALPQHHSKHISSHKETPHRPR
SQSSELRSKSRFSPAPHQSQSSSSSNLSPKTKARHLSSTDRSTEHRHRPRDHKSKLSINS
KTNPSPTPKLKATVETNSHSVHNSSSRPPPQPAPEISARSHSKTSLRVSPNRKPKTQSRE
EAVPSTQSFKKEQKPREREPDLHSRSKAQGKGLVHSTEVQRHRRLAEEQLARQHWVQSSE
EEGEEEDRRKEQGDREKKRRRRKEHNAEWQAIQPKQRPHTNSQHQPRTECSAPEREDQKR
KKRRRSSEEHSSNPGVIDSNPSPPLSPPSPTPAVRPTRRPFTSSSSSSSSSSTSSSDSDS
EPSPPPNVAKVPADSTSSQRPAPKERHQEQRRSSKLRASNDASPDEGQQHPGKHKLYTLV
PFGRTEKSTAVSHRGLRNLVVKIDLSLLARVPNTSEVPNKGTSSLSSSSSSAKAVEKTSM
KHQYHQDTGDSKSKRKAENGEGQRESKRSHIRTEKLPVSTHSPDTEKQEVHPDNKQNDHH
ADYIYTKRPLSPLSPLSNPSKMQHFDQQHTNQPRDRESSVKKTQIQKTRPKIEAESAGAS
GNTQPPSGTWVASAKELSYRGTVPYNDVSHHAEYYMHEAKRLKHRADAMVDKLGKAVNYV
DAALSFMECGKAMEEGPLEAKSPYAMYAETVELIRYAMRLKSHTSPGARQEDKQLAVLCF
RCLALLYWQMFRLKKDHALKYSKALTDYFKTLPKVPHPPTAWNDTTKGNVPPSCISPVGF
TGFQPGSLFINIPNRIHQMAANHLNITNSVLYSYEYWEVADTLAKENKEFFNYLNTLTGP
LTLHSSMAHIVQYTRQGLQWIRISANLS
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgacccactcctggccttcccagcagcccccaggaggaggggggacagaacgattcctg
tattcggattcaaaagaaggaaaacgccacaacactcagcacaaacaagtaaggaacgat
gcccctataaggatgccacgtgtggcccctcacaaatccatgcttgctgatgacctgaag
ctcagtagtgatgaggatgacagtgacaagggaccccatcaaaatgcttcctggtctgaa
aatcacaacctgtcagggcagtacatacacacacatggcaggagggcaagacattccagc
tcaggctcctcaggatctgattcctccagtgagtctgggagcagtagccagcggtcacgc
agcccaagcccagaagcacagactcaacctgagatccctagccagccattgccgcttacc
ttcagcaaagagaatcagcatccatccttgacacactggcagctggacaagtggcttgag
aaagttcataaaacccgaccgtcagatcacgacccaggaggaggtcacagctctagtgca
ggctttgattctgatagaggaccatctccaggaagatattgggatagagactccggcctt
ggaacaagagggagctacagtccaagccagagccctgttcccagccctaagtttgactac
agcccgaggcatagtcacggatctagtccgggatatagcccttgcccaagcccaggaatt
acccctgtgccaagtccagttcccagtgtttgtccaagcccaggtgctagcttaagaatt
agtagaagtcccagtcctttaccccctcaccctccaaaaagccctagcctcccttctgct
cctgcttctccaagaatcacttcttatactcaggttcaacaggaaagctccagactttcc
acacaggctccatatacctccagtcctgtgcgtcaacctaaggttagaccatggttgcca
ccagaccataacactcaacgtattaataattctagacagaaagattctagacaacctgcc
ctcccacagcatcattccaaacacatctcaagtcacaaagagactccacacagaccaaga
tcccaaagcagtgaattgaggtcaaaatccaggtttagtcctgctccacatcaatcccag
tctagctccagttccaacctcagccctaaaacaaaggccagacacttgtcttccactgac
cgtagcactgaacataggcacagacccagggatcataagagtaaattgagcataaattcc
aaaacaaatcccagccccacacccaaacttaaggccacagttgagacaaacagtcactca
gtacacaattccagctctaggccaccacctcagcctgccccagaaatttcagctaggtct
cactcaaaaactagcttgagagtcagccccaacagaaaaccaaaaacacaatccagggag
gaagctgtgcccagcactcagagttttaagaaggaacaaaagccaagggaacgagagcca
gatttacatagccggagtaaggcccaaggaaaaggcctggtccattctacagaagttcaa
agacacaggagactggcggaggagcagttagcaaggcagcactgggtccagagttctgag
gaagagggtgaggaagaggacaggagaaaagagcaaggagatagagaaaagaagaggagg
aggaggaaggagcataatgctgaatggcaggcgatacagcccaagcagagaccccacacc
aacagtcagcatcagccccgaactgaatgcagtgcacctgagcgggaggaccagaaaagg
aagaagaggaggagaagtagtgaagagcattcctccaatcctggagttatagactccaac
ccatctcctccactatctccaccctctcctactcccgctgtccgccctacacgccgacct
tttacttcttcttcctcttcttcctcttcttcctccacatcttcctcagattcagactct
gagcccagtccacccccaaatgttgctaaagtccctgcggactctacatccagccagaga
cccgcaccaaaggagaggcatcaggaacaaagaagatcctctaagttgagagcatcaaat
gatgcttctccggatgaagggcagcagcatccaggcaaacacaaactctacactctggtg
ccatttggccgtactgagaagtccacagctgtctcgcatcgaggactgaggaatctggtt
gtcaagatagacctttctcttctggcaagagtccctaacacaagtgaggtcccaaataaa
ggaacttcatctttatcatcatcctcatcatcagctaaagctgtagaaaagacctccatg
aagcatcagtaccaccaagacactggagattccaaaagcaaacggaaggctgagaatgga
gagggtcaaagggaaagtaagagaagccatattcgcactgaaaagctcccagtttccaca
cactcacctgatactgaaaaacaggaggttcatcctgacaacaaacagaatgaccatcat
gcggattatatctacaccaagaggccactgtccccactctctcctctctccaatccttca
aagatgcagcattttgaccagcaacatacgaaccaaccaagagacagagagtctagtgtg
aaaaaaacacagatacagaaaactcggcccaagatagaagcagaatctgctggggcgtcg
ggaaacactcagcctccatctggaacctgggttgcatctgcaaaggaactgtcctacaga
ggaactgtgccttacaatgatgtctcacaccatgcagagtactacatgcatgaggccaag
agattgaagcatcgagctgatgctatggtggataaattagggaaagctgtaaattatgtt
gatgctgctttgtccttcatggagtgtggcaaggccatggaggaaggccctttggaagct
aagtctccttacgcaatgtatgcagaaacggtggaactcattagatatgccatgaggtta
aaaagtcacacaagccctggagccaggcaggaggacaagcagctggctgtactttgtttc
cgttgtcttgcacttctatactggcaaatgttccggttaaaaaaagaccatgccctgaaa
tactccaaagctctgacggactactttaagactttaccaaaagtgcctcatccaccaact
gcctggaatgataccaccaagggaaatgtgccaccaagttgcatatcccctgttggtttt
actgggttccagccaggctcccttttcattaacattcccaatcgtatccaccagatggca
gcaaatcacctcaatatcaccaacagtgtgctttacagttatgagtactgggaggtagct
gacacattggcaaaggaaaacaaagagttttttaactacctgaacacactgactggtccc
ctgactctacacagcagcatggctcatatagtccagtacacacgacaaggactacaatgg
atacggatcagtgccaatttgtcctag
DBGET
integrated database retrieval system
