KEGG   Clarias gariepinus (North African catfish): 128524439
Entry
128524439         CDS       T10780                                 
Symbol
rif1
Name
(RefSeq) telomere-associated protein RIF1
  KO
K11138  telomere-associated protein RIF1
Organism
cgar  Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cgar03032]
    128524439 (rif1)
DNA replication proteins [BR:cgar03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    128524439 (rif1)
SSDB
Motif
Pfam: Rif1_N
Other DBs
NCBI-GeneID: 128524439
NCBI-ProteinID: XP_053352987
LinkDB
Position
5:23448534..23466205
AA seq 2406 aa
MMATVPMSSSSLLSLLRTLEDNAAGVSEQTDAYLTIANRLSGEDGRQFFPLILKHFPRLG
KAFQTHISSENEELSQAALQALGFCVFNTNIVSGIPVNFAEEILLTLCALVLKTTDKNTC
TRALWVISKQNFTAEVVAKKTPEILKTLEALQTKDIQSVLTDHESLNVVIKLLEQAPVQM
GEGAVTWIKLVIPLVVHPASKVRLRAAAALELGMPLLLEKQQEVAAIVEPMMSSKLIPEM
QKLFSTKNESNVLKLWPLFVKLLGKLLHKGGAFINSLLYLEELGFRSSSPSIKKIAFIAW
KSLIDNFALNPDILCSSKRLKLLMQPLSSILVRTEALLLTKLEVWWYLVVKLGPNLSANF
EQVGVPLLLSTIPADVSLLFPATPARNTSQSNGIGLVTPKPGVASCSTPGPNSRLSLNSS
ASVPQTYSSIQLLGLEMLLHYFLGSQASAAAAKNSLQLSLEPLTHNLLSSNSFFSKHSST
LISAVRDGFISVGKDAPEALLNLIWSSLVGHVNTTVEAAGNKKERQGSEVLTLLLQALQS
IVSSEALPAPRALALFEATVKAIPQKVLGSAAYQVANMDVLNGTPALFLILLFFKSSMLS
SFVTDERFFVCLETLVSCGLCGPTSPLAFAESVLGTVSGSVETVENKEHLWRMWSVVVNP
LTDTITQTNEVNQGDALEHNFSAIHSALMFPIIHLLPGSGLPQTTQKTMLGTWSRLYKAF
ARCSALVATAEENVCCEELCARVSAALDGEALKSLFTLDAVANILLSIIETVDFSPFTPQ
FQQKMKSPHTPLGWVRKRNKALGNLSNFHVLLVQSLEVFLTLASSGENSAVLSTIGTILF
SIVSILFTNLALPTVIHESLAFLTKPLGLLYGLVGSSEDEQKTHSVLGSKLEKLVGDVLG
NLQTRSALQYDDELLEVLCPLLCVLFQHKSKQIRSIITQFWNATFGNAVVLAYPESLRPI
LSQAKQKSPLILPGFQAVDDFEDFSGPCSSECSQLDAKISGITVTSVGKRESLLTRAAEL
KEKSSGTPSKPVSVKLDFGSPKLPRKEVLEEEASVDFVFIPPEAKERVLTEHQKEVKRTK
RVDIPVMYNNLDASLDTTAFTQYTQSQEESMDKFPTHEQAETKKVAMTELKDLKDEASPV
GHDQKVLENSPGTTAQDKATNESNQTSEGPSSADVTTLGASDLNDSASHKESQSPNVSGS
SDMISGTPPKPNSRRQSFITLEKYGEGRAVSSPSVEKFTGPLTRTCSQEPPKSQNDSKLL
PPASYSQPETGKDDPKESTTDITQDSSNQSVGQNEKIPAMVKPAKCLSEGTEDEDDVIPD
TQTQELQEASDAGNKSSDKYNEDMNMEIASPGGESDVAASQDSSQVELRRSGRRRSKPIL
PGEESDQESKSKQQKKAPVKSPTSNDAQTSTPAKKAAVLPTRTRRSRLHEENLNESGKLQ
DSEQKDSQEPALAGSLSQRRSRSRSKEINQTELSDEKQSLSQTDDKNESPLSQSDSPSNS
RPVRRTRLSNANVHVSDKRKRSELDSPVEISKQVDCSVSDADNQSAGRPRRARRSDGAEA
QNKDKPGHRNKGITDPSPTRTPTLAKCRQLGRWKKDDDDDDDDDEDEDEEDTTPSGSVNS
ECSEGNVHSELQKNSQGPGKYRTRRSSQALLVSVENSESDGSDTRDRQRPKRARGLKSSE
VMPSTVVSENTPLNILGKEDAVIPSIPMDTSKNESEACLGVGPLNEVQDLCKADDKDEPL
VAEDQMIDSSDLKSAADEQQSDKETIMQTDSDHKESLNAVLEQRDAEKEALLSPLNSLQL
PAKVELKAPELRTCPHSKRGRGRRRSTNCNCHQVSSTSSKDQCSNSQDVQDIKENKLLLE
SSTLVSEAELNSITSVLPEKEGEALQVGCPDVANVQSSPTLPNLPEAEVPTESPVEKHNE
SVSNFSDVNESTAMEEEHHKDNVVDGTEDKLKEIEHNTILLENPFGQEQTLEASSAPDVL
PSQSQPVQEEKPFCQEQSESPVSQEEMVHNGEKSEMTRKEELVLSEFGNNQEEQDDGEAT
QIDKDLQAETAQPCEASIPPQTAALESGLDSPPKQKSLDSLCSNTEVRQSPSNSVTRGVW
SPSASPSTSILKKGQKRQCEEDSPSPLIKSRRVSFANPIYQQELADDIDRRSPVIRTSSP
KSKAIGQPKYITTPTKGLLTLSPRNLRSPGYKSSKKCLISEMSQEPRPIPKDCVYPALVS
CSTPVEAVLPQISSAMWPRGFGQLVRARNIKTVGDLSALSPNEIKSLPIRSPKVSNLKKA
LKTYHEQQRKGRPDDLKSFDEMEKMTSEPEETTAAPNQEEDQMSGDGQEVISSEVESTVE
HKQEEPMPVEVVSDVASLGARLTQEELGRCSPRELGLMHEQLSGMMRIIVDHLQARLIRN
LEDSLS
NT seq 7221 nt   +upstreamnt  +downstreamnt
atgatggccacagtccccatgtccagctccagcctcctctcgctcctcaggactctggag
gataatgcagccggtgtgtctgagcagacagatgcctaccttactattgcaaatcggttg
agtggagaagacggacggcaattttttcctttaatcctaaagcactttccacgtctgggt
aaagcttttcagacccacatatccagcgagaacgaggagctaagccaggctgcacttcaa
gcactgggcttttgtgtattcaacacgaacattgtatctggcattccagtaaattttgca
gaggagattttgttgaccctttgtgccttggtgttaaagactacagacaagaacacctgc
acacgagcattatgggtcatttcaaaacagaactttactgcagaagttgttgccaaaaag
acaccagaaatacttaagacgctagaggctttgcagacaaaagacatccagtcagtctta
acggatcatgagtcactaaatgttgtgataaagctgcttgagcaggcccctgttcagatg
ggagaaggagcagtcacgtggattaagctggtcatacctttggtagttcatccagcctcg
aaggtgcgcttgcgagcggctgcagcactggagctgggaatgcctcttcttctggagaaa
cagcaggaggtggctgccattgtagagcccatgatgtcgtctaaacttatccctgagatg
cagaaactcttctccaccaagaatgagagcaatgtgctgaagctctggcctttatttgta
aagcttttgggcaagttgcttcacaaaggaggagccttcatcaactcactgctctattta
gaagagctgggatttcgcagctcttctcccagcattaagaaaattgccttcatagcctgg
aagagcctcattgacaactttgctctcaatccagatattctctgtagcagcaagcgacta
aaactgcttatgcagccactcagctccattcttgtaaggactgaagccttgttgctcacc
aaattagaggtctggtggtatctggtggtcaaactagggcctaatttgtctgctaacttt
gaacaggttggtgtgccactgctgctcagcacaattcctgcagatgtgtcattgttgttt
ccagccacccctgctagaaacacaagccagagcaatggcattggactagttactcctaaa
ccaggtgttgcttcatgtagcactccaggtcctaactctcgtctgagccttaacagcagt
gcaagtgtcccacagacctactcctccatccagctgctggggctggagatgctactacac
tattttttaggctcacaggccagtgctgctgcagccaagaacagcctgcagctcagtctt
gagcctttgacacacaaccttctgagcagcaactcgttctttagcaagcattcctccaca
ctcatttcggctgttagagatggattcatttctgtgggcaaagatgctccagaagcattg
ctgaatctgatatggagcagccttgtgggccatgtcaatacaacagtagaggctgctggc
aataagaaggagagacagggttctgaagtacttaccctcctgctacaggctcttcagtct
attgtgtcctctgaagccctgccagctccgcgagcactggctttgtttgaagctactgtg
aaggcaatccctcagaaggtgctagggtctgcggcctatcaagtggccaacatggatgtc
ttgaatggtaccccggcccttttcttgattctcctcttcttcaagagcagtatgctctca
tcgtttgtaaccgatgaaagattctttgtgtgcttggagacccttgtcagttgcggtctc
tgtggtcccacatcccctctggcctttgcagaatcagttttgggcacagtcagtggcagt
gtggagactgtggaaaacaaagagcatttgtggagaatgtggagtgtggttgtgaaccct
ttaactgataccattacacagacaaatgaggtaaaccaaggagatgccctggagcataac
ttcagtgcaattcatagtgccctgatgtttcccattattcaccttttgcctggctcgggt
cttccacagacgactcagaaaaccatgctgggcacttggtctcgattatacaaggctttt
gctcgctgctcagctcttgtggctacagcagaagagaatgtttgctgtgaagagttgtgt
gccagggtatctgctgcactggatggtgaagccctgaagagtttgttcactcttgatgct
gtagcaaatatcttgctgtccattattgaaactgtggacttttctccatttacccctcag
tttcagcaaaagatgaaatcccctcacacaccacttggttgggttcgaaagagaaacaaa
gctttggggaatctctcaaactttcatgtgctcttggtgcagtccttggaagttttccta
accttggcctcttcaggggagaacagtgctgttttaagtaccattggtacaatactgttc
tctattgtgtctattcttttcacaaaccttgcattacccactgttatccatgagtctttg
gctttcctcaccaaacctcttggacttctttatggactagtaggaagttcagaagatgaa
cagaagacccactctgtgctaggatccaagttggaaaagctggtaggcgatgtgcttggc
aacctgcaaacgcgttctgcactgcaatatgatgatgagctcctggaggttttgtgtcct
ttgctctgtgtactgttccagcacaagagcaaacaaatccgctccatcattactcagttc
tggaatgcaacttttggaaatgctgttgtactggcataccctgagagtctcaggcctatt
ttaagtcaagctaagcagaagtctcctttaatcttacctggttttcaagcagttgatgac
tttgaggatttcagcggcccgtgctctagtgagtgttctcagcttgatgccaaaatcagt
gggattacagtgacttcagtagggaagagagaatccttactaaccagggcagcagagcta
aaggaaaagagctctggaacaccctccaagccagtatctgtgaaactggattttggttct
ccaaagctgccacgaaaagaagttcttgaggaggaagcatcagtagattttgtcttcatt
ccacctgaggcaaaggagagagtgttgactgaacatcagaaggaggtcaaaagaactaaa
agggttgatatccctgttatgtacaataatttggatgcatctttggatactacggcattt
acacagtacactcagagccaagaggaatcaatggacaaatttccaacacatgaacaagct
gagaccaaaaaagttgcaatgactgaactgaaggatttaaaggatgaggcatcacctgtt
ggccatgatcagaaggttttagaaaacagtccaggtacaactgcacaagacaaagcaaca
aatgaaagtaaccaaactagtgagggcccatcttcggcagatgtcacaactttgggagca
agtgaccttaatgattccgcaagccataaagagagccaaagcccaaatgtgtcgggttca
tccgacatgatctctggtactccaccaaagcctaacagtcgacgtcagtctttcatcacc
cttgaaaaatatggagagggaagagcagttagttccccaagtgttgaaaaatttactggc
ccactcactaggacatgtagtcaggagcctccaaagtcacaaaatgactccaaattgctc
ccacctgcctcttactcacagccagaaactggaaaagatgaccctaaagaatctactact
gatattacccaggattcttctaatcaatctgttggacaaaatgagaaaataccggcaatg
gtaaaaccagctaaatgtttaagtgaaggcacagaagatgaagatgatgtgattccagac
actcaaacccaagagctacaagaggcaagtgatgctggtaacaagtcttcagacaaatac
aatgaggacatgaacatggaaattgcctcccctggtggagaatctgatgttgctgcttct
caggattcaagtcaggttgaactgaggaggtcaggtagacgcagaagtaaacctatcctg
cccggggaagagtcagatcaggaatcaaaaagcaagcagcagaaaaaggctcctgttaaa
tcaccaacttcaaatgatgcacaaacatctacacctgccaagaaagcagcagttttgccc
acaagaaccagaagaagtagactccatgaagagaatttaaatgaaagtggcaaattgcag
gatagcgaacagaaagattcacaagaaccagctctggctggctctttatcgcaaagacga
agcagaagtaggagtaaagagattaaccagacagagctgtctgatgaaaaacagtcttta
agtcaaacagatgataaaaatgaatctccacttagtcagtcagatagtccgtcaaatagc
aggcctgtaaggaggaccagattatccaatgctaatgtacacgtttcggacaaaagaaaa
agatctgagttagactctccagtcgagatatccaagcaagttgactgctctgtgtctgat
gctgataaccagtcagctggcagaccaagaagagcaaggcggtctgatggagctgaagca
caaaacaaagacaagcctgggcatagaaataaagggataactgacccaagccctactcgc
acaccaacacttgcaaaatgtaggcaattaggtaggtggaaaaaggatgatgatgatgat
gatgatgatgatgaagatgaagatgaagaagacactactccctcaggttcagtgaattct
gagtgctcagagggtaatgtgcacagtgagttacagaaaaattctcaagggcctggcaaa
tatagaactcgacggtcatctcaagccttgttggtatctgttgagaactccgagtccgat
gggtctgatacccgagatagacaaagacctaaaagggctagagggcttaaatcatctgaa
gtgatgccaagcacagtggttagtgagaatactcctttgaatattttgggcaaggaagat
gcagttatcccttccattccaatggacacttctaagaatgagtcagaggcctgtttaggt
gttggcccactgaatgaggttcaagacctttgcaaagctgatgacaaagatgagccactt
gttgctgaagaccagatgattgacagttctgatttaaaatcagctgctgatgagcaacaa
agcgacaaagagacaataatgcaaacagattctgatcacaaggagtcacttaacgctgtt
ctggagcagagagatgctgagaaagaagcccttctatctccacttaacagcctacaacta
cctgcaaaagttgaattaaaggctccagaattgcgtacatgtccacatagtaaaagaggt
cgtggacgcagacgctccactaactgtaactgtcaccaagttagcagcacgtcttcaaaa
gatcaatgcagtaattctcaagatgtccaggatataaaggaaaacaagcttctgcttgaa
tccagcaccctggtgtctgaggctgagttgaacagcatcacatctgttttaccggaaaag
gagggggaagctctccaagttggttgtcctgacgttgctaatgtacagtcttctccaacc
ttgcccaacctaccagaagcagaggtgcctactgagagcccagtggaaaagcataatgaa
agcgtttctaatttctctgatgtgaatgaaagtacagctatggaagaggaacaccacaaa
gacaatgttgtagatggcacagaggataaacttaaagaaatagaacacaatacaatttta
ttagaaaatccatttggacaggagcaaacgctggaagcttcaagtgcaccagatgttttg
ccaagccaaagtcaacctgtgcaggaggaaaaacctttctgccaggaacagtctgaatct
cctgtcagtcaggaggaaatggttcacaatggagaaaaaagtgagatgactagaaaggag
gaacttgtgctttctgaatttggcaataatcaagaagagcaggatgatggtgaagcaaca
cagatagacaaagatcttcaggctgagacagctcaaccttgtgaagcatctatacctcca
caaactgctgcactggaatcaggcttggactccccacccaagcagaaatctttagattct
ctttgtagcaatacagaagtgagacagagtcccagtaatagtgtaacacgtggtgtatgg
tcaccatcagcctctccatctacaagcatactgaagaaaggacagaagaggcaatgtgag
gaagattctccatcgcctcttattaagtctcgaagagtatccttcgcaaacccgatatac
cagcaggaactggcagatgatattgaccgccgtagtccagtaatacggaccagctctcca
aaatcaaaagctattgggcagcctaagtatattacaacacctacaaaaggcctgttaacc
ctcagtcctcgcaaccttcgcagtccgggttacaagagttcaaagaaatgcctgatctca
gaaatgagtcaggagccacgccccattccaaaggattgcgtttatcccgcccttgtcagc
tgttctacgcctgtggaggctgttctgccccagatttcatccgcaatgtggcctcgaggt
tttggtcagcttgtgcgtgctaggaatattaaaacagttggagatctgagtgctctatcc
ccaaatgagatcaagtcgctccctattcgctcacctaaggtgtcgaatctcaaaaaagct
ctgaaaacttaccatgagcagcagcgcaaaggacggccagatgacctgaaaagctttgat
gaaatggagaaaatgacttctgaacctgaggagactactgcagctccaaatcaagaggag
gaccaaatgtctggagatggacaagaagtaatttcttcagaagtggaatcaactgtagag
cacaaacaagaggagccaatgcctgtggaggttgtgtcggatgttgcttctctgggagct
cgtctaacccaagaggagcttggtcgttgttccccaagagaacttgggctgatgcatgaa
caactcagtggcatgatgagaattattgtggatcatctccaggcacgtttgatcaggaac
cttgaggacagtttgtcatga

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