Clarias gariepinus (North African catfish): 128524497
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Entry
128524497 CDS
T10780
Symbol
tfdp1a
Name
(RefSeq) transcription factor Dp-1a
KO
K04683
transcription factor Dp-1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03083
Polycomb repressive complex
cgar04110
Cell cycle
cgar04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
128524497 (tfdp1a)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128524497 (tfdp1a)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128524497 (tfdp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128524497 (tfdp1a)
03036 Chromosome and associated proteins [BR:
cgar03036
]
128524497 (tfdp1a)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
128524497 (tfdp1a)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
128524497 (tfdp1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
128524497
NCBI-ProteinID:
XP_053353054
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Position
5:complement(21265286..21282547)
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AA seq
407 aa
AA seq
DB search
MAKDAGLIEANGELKVFIDQNLSPAKGVLSLVTVHPQSVAVGKQLLPKTLGPSNVNIAPQ
MVIGTPQRPSGSNVLLMNSPHTPSSQFITQSQPPDASPWSSGKRSKKGEKNGKGLRHFSM
KVCEKVQKKGVTTYNEVADELVAEFSSGDNHISPNDAQVYDQKNIRRRVYDALNVLMAMN
IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN
RQTEQQTNRPPPENSVIHLPFIIINTSKKTVIDCSISNDKFEYLFNFDSMFEIHDDIEVL
KRMGMACGLEVGKCSAEDLKVARSLVPKALEPYVTEMAQGPISNVYMTGTSSTNGGRYHI
SSESGADATMASSSNDSHYSGSRVETPVSYMDDDDDDDDYDENDEDD
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagatgctggtctgattgaggccaatggggagttgaaggttttcattgaccag
aatctgagtccagccaaaggagtcttgtctttggtgactgttcatccacagtcagttgca
gtaggaaaacaacttttgccaaaaacacttggcccatcaaatgtcaacattgctcctcag
atggtcattgggacacctcaaaggccaagcggatccaacgtgcttttaatgaacagtcct
cacacacccagctctcagttcatcacccagagccaacctccagatgcttccccatggtcc
tcagggaaaagaagtaagaaaggggaaaagaatgggaaaggtctgagacatttttctatg
aaggtttgtgaaaaagtacagaaaaagggtgttaccacatataatgaagttgcagatgag
ctggtggccgaattcagctctggtgacaatcatatctccccaaatgatgcgcaagtgtat
gatcagaagaatattcggcgacgtgtatatgacgcccttaatgtgttgatggctatgaac
ataatctcgaaggagaagaaggagatcaagtggattgggcttcccaccaactcagcccag
gagtgccagaatctggaggtggagaggcaaagacgtttggaaagaatcaagcaaaaacag
tcacaactccaagaactaattttacagcaaatagcttttaagaaccttgtgcagcggaac
cgtcaaacagaacagcaaacaaacagaccacccccagaaaattctgtcattcaccttccc
tttatcatcattaacaccagcaagaaaaccgtcattgactgcagcatctccaatgacaag
tttgagtacctcttcaactttgacagcatgtttgagatccacgatgacattgaggtatta
aaacgtatgggcatggcatgtggcctggaggttggcaaatgctctgctgaagacctcaag
gtcgccaggagcctagtgcctaaagcactggagccttatgttacagaaatggcacaaggt
ccaataagtaacgtctacatgacggggacttcatctaccaatggaggtcgctatcatatc
agcagtgaaagtggagcagatgcaacaatggcctccagctctaatgactcgcactatagt
ggttctcgggtcgagaccccagtttcttacatggacgacgacgatgacgacgatgactat
gatgaaaatgatgaagatgactaa
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