Clarias gariepinus (North African catfish): 128524615
Help
Entry
128524615 CDS
T10780
Symbol
usp9
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Enzymes [BR:
cgar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128524615 (usp9)
Peptidases and inhibitors [BR:
cgar01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128524615 (usp9)
Ubiquitin system [BR:
cgar04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128524615 (usp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128524615
NCBI-ProteinID:
XP_053353238
LinkDB
All DBs
Position
5:21577939..21612973
Genome browser
AA seq
2608 aa
AA seq
DB search
MTATTRGSPMGGNESQEQGQAPDGQSQPPLPQNQTSTPTSSNENSPVSPPDEQVQGGDCA
GQLEEEEEPAFPHADLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLCKKGLDVKCEAC
QRFFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLMELCVTKLSQDWFPLLELLAM
ATNPHCKFHIYNGTRPSETVPAGVQLAEDELFARPPDPRSPKGWLVDLINKFGTLNGFQI
LHDRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPIIEMVPQFLENLTDEELKK
EAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNMEIFRLKMILRLLQISSFNGKMNALN
EVNKVISSVSYYTHRHGNPEEAEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKI
LRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKESW
TNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKIL
DYSCSQDRDTQKIQWIDRFIEELRSNDKWVIPALKQIREICSLFGEAPQNLRRKIPINLT
SLASQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMENMRQFSKAEHTDFDPQTVR
PGSRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSK
LMGDEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRVYMM
DDLELIGLEYLWRVVIQGSDDIANRAIDLLKEIYTNLGPKLQANQVEIHEDFIQSCFDRL
KASYDTLCVLDGDKDSINCARQEAIRMVRVLTVLREYITECDSDYHEERTILPMSRAFRG
KHITLIVRFPNQGRQVDDLDIWSHTNDTIGSVRRCILNRIKANSAHTKIELFIGGDIIDP
ADDRKLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVE
SCLPGVIMSLHLRYISFLWQVADLGCNLNMSLLRDGARVLMKLMPPDNTTVENLRAICLD
HAKLGESSLSPTLDSRFFGPSPSQVLYLIEVVYALLMPASGTLGEDASDFQYNFLRSGGL
PLVLSMLTRNNFLPNADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPVAEGNIP
VSPINQATHDQALVLQNALQNIPNPSAECMLRNVAIRLAQQISDENFFQASKYIPDIGVI
RAVQKIVWASGCGSIQLVFSSIEEISNIYEKTNAGNEPDAEDEQVCCEALEVMTLCFALI
PTALDALSKEKAWQTFIIDLLLHCQSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFT
VLGSTAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIKDEVKRTGE
TGVEETILEGHIGVTKELLAFQTAEKKYYIGCEKGGANLIKELIDDFIFPASNVYLQYMK
SGEFPPEQAIPVCSSPATITAGFELLVALAVGCVRNLRQIVDTLTDMYYSGCEALTEWEY
LPPVGPRPTKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGSDVDDDMSGDEK
QDNESNVDPRDEVFSYHHQFDDKPSLSKSEDRKEYNIGVLRHLQVIFGHLASSRLQYYVP
RGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKIC
QGCPHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRL
LIKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGSDVHPEN
QVIQQNEPSEPEAPCSSRYRLVGVLVHSGQASGGHYYSYIIQRNGSGSEGETNRWYKFDD
GDVTECKMDDDEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDSLDKD
GELVKYISELSVSSKPHQIKMPPAIECSVRKQNVQFMHSRMQYSLEYFQFIKKLLTCNSV
YLNPPPGQDHLLPEAEEMAKISIQLAARFLFSTGFHTKKAVRGPASDWYDALCILLRHSK
NVRCWFAHSALFSYPNRFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPYPSPIASPGP
SSQGCDNLSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLGVP
ATFMLVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVTSRMQSSINGNPPLANPYGDP
SLTQPIMPLHQLVAEILFVRTSYVKKIIEDCSNSEETIKLLRFCCWENPQFSSTVLSELL
WQVAYSYTYELRPYLDLLLQILLVEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQK
RAYQCIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNAQYTYNNW
SPPVQSNETSNGYFLERSHSARMTLAKACELCPEECHLSKHEVVSEEDAGRKLSSPQQLL
PGEVTGQQQHTEQDEQEAPDDQDSSPPEDTSLYPHSPGTQYQQQNNLPHGQPYTGPAAQH
MNNPQRPGPRAQENWEPPEELPPAQTKE
NT seq
7827 nt
NT seq
+upstream
nt +downstream
nt
atgactgccacgacccgtggctcccccatgggggggaatgaaagtcaggagcagggccaa
gctccggacggtcagtctcagcccccactgccccaaaaccagacgtccactcccacatca
tccaacgagaactctccagtgagtcctccagatgagcaggtccaggggggagactgcgca
ggccagctggaggaggaggaggagccggctttcccccacgcagacttggccaaactggat
gacatgatcaacaggccccgctgggttgttccagttttgccaaagggtgaattagaagtt
cttcttgaagctgctatagatctttgcaaaaaaggacttgatgtcaagtgcgaagcctgc
cagagatttttccgggatggtttgacaatatctttcaccaaaatactgactgatgaggct
gtcagtggatggaaatttgaaatccataggtgcataatcaacaacacccatcgtctgatg
gaattgtgcgtgaccaagctctctcaggactggtttcctcttctagagctcttggccatg
gccaccaacccccactgcaagtttcacatttacaatggtacccggccctcagagacggtg
cctgccggggtgcagctggctgaagacgagctctttgctcgcccacctgacccccgctca
cccaagggctggttggtcgatttaataaacaaatttggcacattaaacgggtttcaaatt
ctgcatgatcgattcatgagtggccaagctctgaacgttcaaatcattgccgcactcata
aagccttttgggcagtgctatgagtttctcacattgcacacggtaaagaagtacttcctt
cccattatagaaatggttcctcagtttctagaaaacctcactgatgaggagctaaaaaag
gaggccaagaatgaagccaaaaatgatgctctgtctatgataatcaagtcattgaagaac
ctggcttcaagagtaccaggacaagaggaaacggtgaagaacatggaaatttttaggtta
aaaatgattcttaggttattgcaaatttcatcttttaatggcaaaatgaatgcacttaat
gaagtaaataaggtgatctcaagtgtctcgtactacacacaccgtcacggaaacccagaa
gaggcagagtggctcacggcagagcgcatggcggagtggattcagcaaaacaacattttg
tccatcgtgctccgtgatagccttcatcagccccagtatgtggagaaactggagaagatt
ctgcgctttgttattaaagagaaagctcttacacttcaggacctggacaacatttgggct
gcccaggctgggaagcatgaggctattgtcaagaatgttcatgatctccttgcaaaattg
gcatgggatttttcacctgaacaactagaccatctttttgactgttttaaggaaagctgg
acgaatgcaagtaaaaagcaacgagagaagttactggaactaattcgcaggctggcagaa
gatgataaagatggtgtgatggcgcacaaagtgctcaatctgctgtggaacctggcccat
agtgatgatgttcctgtggatatcatggaccaggccctcagtgctcatatcaagattttg
gactacagctgttcccaggatcgggatacccaaaagatccagtggatagatcgcttcatt
gaggagttgcgatcaaatgataaatgggttattccagcattgaagcaaattcgagagatc
tgtagtctttttggagaggctccacaaaatctcagaaggaaaatacctattaacttaaca
agcttagcaagtcaaacccagaggagcccacatgttttttatcgccatgaccttattaac
caacttcagcacaatcatgcactggtcactctggtagctgagaatctgtctgcatatatg
gagaacatgagacagttctccaaagcagagcacacagactttgaccctcagacggtcagg
cctggaagtcgatacagtcatgtgcaggaggtgcaggagcgtctgaactttttgaggttc
ttgctaaaggatgggcagctgtggctctgtgccccacaggccaaacagatctggaagtgc
ctggcagagaatgcagtatttctgtgtgatcgtgaagcctgctttaaatggtactccaaa
ctgatgggggacgagccggaccttgaccctgacatcaataaggactttttcgagaacaac
gtgctccagctggatccgtctctgcttactgaaaacggcatgaaatgctttgagcgcttc
tttaaagcagtgaactgcagagagggcaaattggtggccaagcgccgagtgtatatgatg
gatgacctggaattgattggactggaatacctgtggagggttgtgatccaaggcagtgat
gacattgctaaccgagcaattgatttgcttaaagagatttatacaaaccttggaccaaaa
ttacaagccaatcaggtggagattcatgaagattttattcagtcttgctttgaccgactc
aaagcctcctatgacactctgtgtgtgctggatggagataaggacagcattaactgtgct
aggcaggaggccatccgcatggtgcgcgttctcaccgtgctcagggagtacattaccgaa
tgtgacagtgactaccacgaggaaaggaccatcttgcccatgtccagagcatttcgtggg
aagcacatcaccctgattgtgcgatttccaaaccaaggtcggcaggtagacgatctggat
atctggtcccacaccaacgacaccatcggttctgtgagacgctgcattctcaatcgaata
aaggctaacagtgcacacaccaagatcgagctcttcatcggtggcgatatcatcgatcct
gctgatgacaggaaattgatcggccaactcaatctcaaagacaaaacactcatcacggcc
aagctcacgcaggtcagtgccaatatgccttcaagcccagacagctcctctgactcttcc
accggctccccagggaaccatggcaaccattatagcgatggaccaaaccctgaagttgag
agctgtcttcctggagtgattatgtccctgcacttgcgctacatttctttcttgtggcaa
gttgctgacctgggctgtaatctcaacatgtctcttctgcgggatggagctcgggttctt
atgaagctcatgcctccagataacactacagtggaaaacctgcgagccatctgcttagat
catgccaaacttggagaaagcagtcttagccccaccctcgactcccgcttctttggtcca
tcaccttcacaagtcctttacctgatagaggtggtttatgctttactgatgccagctagc
ggcacactgggagaggatgctagtgacttccagtacaacttcttgaggagcggtggctta
cctttggtcttgagcatgctgacccgaaataattttcttccaaatgctgacatggagacg
cgcagaggagcctatctcaatgcactaaaaatagccaagctcctgcttacagccgtgggc
tttggtcatgtgaaggctgtggctgaagcctgccagcctgtggcagagggcaacatccca
gtatcacctataaaccaggccactcatgaccaggcgctggtgcttcaaaacgccctgcaa
aacatcccgaatccctcagctgagtgcatgctccgcaatgtagccatccgtctggctcag
cagatctctgatgagaattttttccaggcctctaagtatatcccagacatcggcgtgatc
agagcggttcagaagattgtctgggcctctggttgtggttctattcaacttgtcttcagt
tccattgaggagatcagcaacatttatgagaagaccaatgcagggaatgaaccagatgca
gaggatgagcaggtgtgctgtgaggccttggaggtcatgaccctgtgctttgctcttatc
ccgactgcgctagatgcacttagcaaagagaaggcctggcagaccttcatcattgattta
ctgttgcactgtcaaagcaagtctgttcgccaaatggcccaagaacaattcttcctcatg
gccactaggtgttgcatgggtcacaggcctctacttttctttattactcttctcttcaca
gttttaggtagcactgcaaaagaacgagccaagcacgctggtgattatttcaccctccta
aggcacttgctcaactacgcatacaacagcaatatcaacctccctaatgcagaagttctt
ctcaacaatgagattgattggttaaaaagaatcaaggatgaagttaaaagaactggagag
acaggggtggaagagaccatattagagggtcatattggtgtcacaaaggagctgctggct
ttccagacagcagaaaagaagtactatataggttgtgaaaaggggggagccaaccttatc
aaggagctgatagatgacttcattttcccagcctctaatgtgtatctgcagtacatgaag
agtggagaatttccccctgagcaggccatacccgtgtgtagcagtcctgccaccatcacg
gctggctttgaacttctagtcgcacttgctgttggatgcgttcgcaatctcaggcagatt
gtcgacaccctaactgacatgtactactcaggttgtgaggcacttacagaatgggagtac
ttgccaccagtgggcccaagacccactaaaggctttgtaggactgaagaatgcgggtgcc
acttgctatatgaactctgtcattcaacagctctacatgatcccacccatcagaaacggc
atcttggctattgagggcacaggcagtgatgtggatgatgacatgtctggggatgagaaa
caagataatgagagcaatgtcgatccacgtgatgaggtcttcagctatcaccaccaattt
gatgacaagccatcactcagtaaatcagaggacaggaaagagtacaacattggggttctg
cgccacctgcaggtgatcttcggacatcttgcttcttccagactccagtactatgttccc
aggggcttttggaaacagtttaggttgtggggtgagccggtgaatctaagagaacaacat
gatgccctggagttcttcaactcacttgtagatagtttagatgaggctttaaaagcactg
ggccatcctgccatgctgagtaaagtgcttggcggttcttttgctgatcagaagatctgt
cagggatgccctcataggtatgaatgtgaggaatcctttacaacactgaatgtggatatc
agaaatcatcagaatctgcttgattccatggagcagtatgtgaagggtgacttgcttgag
ggagctaatgcctaccactgtgaaaaatgcaacaagaaagtagacacagtgaagcgcttg
ctcattaagaaactgcctccagtactggccatccagttgaagcgatttgattatgactgg
gaacgggaatgtgctattaaatttaatgattactttgagtttccccgagagctggacatg
gaaccctatacagtagcaggagtggccaagctggaaggctctgatgtccaccctgagaat
caggtcatccagcagaatgaaccctctgagccagaagcaccatgcagttcacgctacagg
cttgtgggagtgctggtgcactcgggccaggccagcggtggccactactactcttacatt
atccagagaaatggcagcggcagcgaaggtgaaaccaatcgctggtacaagtttgacgat
ggcgatgtcacagaatgcaagatggacgatgatgaagagatgaagaaccagtgctttggg
ggggagtacatgggggaagtgttcgaccacatgatgaagcgcatgtcctaccggaggcag
aagcgctggtggaatgcctacatcctgttctatgagcgcatggactcattggataaggac
ggggagctggtgaagtacatctccgagctgtccgtaagcagcaagccacaccagattaag
atgcccccagccattgagtgcagcgtacgcaagcagaatgtgcagtttatgcacagccgc
atgcagtacagcctcgagtactttcagttcatcaagaaactcctaacctgtaatagtgtc
tatctgaacccaccaccaggacaagaccatcttttgcctgaagcagaagaaatggccaag
attagcattcagctcgctgctcgattcctcttcagcacaggatttcataccaagaaagcg
gtccgtggcccagccagcgattggtatgatgccctgtgcattctccttcgacacagcaag
aatgtacgctgctggtttgcacacagcgccctattttcctacccaaaccgcttctcagag
tacctactcgaatgccctagtgccgaggttcggggggccttcgccaagctcattgtattt
attgcacatttctctctgcaagatggaccgtatccatcaccgattgcctcaccaggaccg
tccagtcagggctgcgataacctgagcctaagtgaccacttgttacgtgccgtgctcaac
ctactacggagagaggtgtccgagcatggccgtcacctgcagcagtacttcaatctgttt
gtcatgtacgccaacctaggtttggcagagaagacacagctgttgaagctcggtgttcca
gctactttcatgctggtggctctggatgagggcccaggcccacccattaagtaccagtat
gctgagctaggaaagctgtacacggtggtgtcgcagctggtccgttgctgtgacgtaaca
tcacgtatgcagtcctcaatcaatggtaaccctcctcttgcaaacccatatggtgatccc
agcttgactcagcccatcatgcctctgcatcagctggtggctgagattctgtttgtgcgt
accagttatgtgaagaagatcattgaggattgcagtaactcggaggagaccatcaaactg
ttgcgcttctgctgctgggagaacccacagttctcctccactgtgctcagtgaactgctg
tggcaggttgcttactcctacacgtatgagctaaggccttacctggacttgctgctacag
attttacttgttgaagactcttggcaaactcacaggatccacaatgtgctcaagggcatt
ccagatgaccgtgatggcctgtttgacaccatccagcgctctaaaaatcactaccagaaa
agagcttaccagtgcatcaaatgcatggtggctctgttcagcaactgctcagttgcctat
cagattcttcagagtaatggagacctgaagagaaagtggacatgggctgtagagtggctt
ggtgatgagctagagcgcagaccatacactggcaatgcccagtatacttataacaactgg
tcacctcctgttcagagcaatgaaacttccaatggctacttcctggagcgttcccacagc
gcccgcatgactttagccaaggcctgtgagctatgcccagaggagtgtcacttatcgaag
cacgaggtggtgtccgaagaggacgcaggacggaagctgtcctcgccacagcagcttttg
ccaggggaagtgacaggccagcagcaacacactgagcaggatgagcaagaggcccctgat
gaccaggactcctctccaccagaagacacgtctctgtatccccactctcctgggacacag
tatcaacagcaaaacaaccttccccacggtcagccttatactggcccggcagcacagcat
atgaacaatcctcagcgtccaggtccacgagcacaagagaactgggagcccccagaagag
ctgccccctgcccagacgaaagagtag
DBGET
integrated database retrieval system
