Clarias gariepinus (North African catfish): 128524629
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Entry
128524629 CDS
T10780
Symbol
fer1l6
Name
(RefSeq) fer-1-like protein 6
KO
K22127
fer-1-like protein 6
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128524629 (fer1l6)
Membrane trafficking [BR:
cgar04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
128524629 (fer1l6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
Ferlin_C
FerB
dsrm_Ferlin
FerI
DUF1270
Motif
Other DBs
NCBI-GeneID:
128524629
NCBI-ProteinID:
XP_053353268
LinkDB
All DBs
Position
5:complement(27837490..27853112)
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AA seq
1830 aa
AA seq
DB search
MDQDKGGSGSQSKNVFGLKVKKKKKKVSKGLVFANKGAQDDSDIKSGAEEPSGAEAQVPE
PVSEPYLSAYLSFREVINIKRAKTVPKILESESKPLTFQISINITEARQLVGENIDPSVV
IEIGDEKKQTSVKEGTNAPFYNEYFVFDFFVHQEIFFDKVIKLSVMHSKIMKSFCVGTFK
IDVRTVYSQPGHQFTNKWAALIDPTDVNSGVKGHLKCDICVTAKGDALPRSQKFKDAEEQ
IEKNPLLPEGFPSMRPWARYYVKVYRAEGLPRINSSIMANVTRAFVSDNTALIDPYVVVS
FFGQVGRTSTQKSTADPVWNEQVVFKEMFPPLCQRLKIQVLDEGSMNDVAIGTHYIDLRR
ISNDQDGDNGFLPTFGPAWVNIYGSARNSTMVDDSQDMNEGIGEGVSFRGRIYLQLTVEI
LSGGAESKSLLSIKMPKDKGGKAGAKDPKAAAGGAGGGEEEKGKATGAMVLPVDPPEMIS
DEDKEKFLLFGVVFEAAMIDRKIGDKPISFEFTLGNFGNFIDGAALPAAKKKVERGPDPS
SQEAVTTTPLLETQPSKTCKSTTPLEKPVIGDGIRNYLYIPILNKKPCIHVWSSWEDWTY
RLYYSNMLDRIAIMFEEGVAKVTELDKLVDPCAEAFIRAVLKEFCKDAREFISFAENKVK
GNNLTMLDKKRLILCKQELENMIGAAGSITEPKRKALTVKEMLREAQKLSHRIRFLVEEP
QHTLPDVFVWMLSNNKRVAYARIPARHLLYSDKLVERGRDCGKIKTLFLKPPSKRGAVGW
IVQAKLDVYLWLGRSRESSHMMENLPAGFEPLGGTSVEDGGSLPDSLFYRDHHRFQLRAH
MYQARGLIAADNTGLSDPFARVSFHSNTQCTAVINQTLTPTWNQMLMANKVSLYGELTDI
VQEPPLVVVEVYDEDAVGKPEYLGSTIAVPVVRLNEEPYTPPQLQYSALFYGSMSGGDIL
GAFELIQTGKHPLPEIDQPEGQIYPVPSYIRPVLCKYRIEVLFWGLRELKKVQLLPVDRP
QVFIECAGKGVNSSVIQSYKSNPNFSVLVDAFDVELPENEYLHPPLTITVVDWRAFGRST
LVGSHVINNLTLFKYTPPSLPPSRPLPPEPASIEPEPLPGPEGTEAQTGEDIYINIEQGD
ISKPSPTPEPVPQDKKHRVSTKSKRRSTKRKKRTAADESADNVIDWWSKYYASVEKIQMS
KQREVNPFPNIYEAVPPLHNLLTDGISTMAKGMKDRKKDFNFKGVLEQNKVATLKIYDKE
LEAEFGPFDDWVKTFELFRGKANEEESSGVERFVGKFKAGFCLYKLPDGDQEGCLDSEEY
KISHGIPPNNSVNVLIRVYIVAATNLHPADPDGKADPYIVLKLGKTEIKDRDNYIPKQLN
PVFGRSFEIQASFPKESLLRILIYDYDVIGGDDLMGETAIDLENRFYSRYRATCGLPTEY
AIEGYNAWRDAIKPTDLLIKLCKENRLDSPRFTPGRITIGEKVYTGKTVFVDEDQVVESY
EHLALKVLHRWEDMPGVGCKLVPEHIETRTLYIKDKPGMDQGHLQMWVDIFPMDMPHPGP
PVDISPRKPKGYELRIIIWNTEDVILEDTNFITGQQSSDIYVKGWMKGLEDDGQETDVHY
NSLTGEGNFNWRFVFPFNYLPAEKLVVVSKRDNIFSLDKTEQKLPAVLVLQVWDFERLSS
DDFLGSVELDLHGFPRGAKTAKECKMDMLTNPGENISIFQQKRAKGWWPFVKTEELTGKV
EAEFHLVTAEEAEKNPVGRARKEPEPLEKPNRPDTTFSWFVNPFKCFFHLIWKNYKKYII
AALVLLILALFLALLFYTLPGAISNRIVSG
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagacaaaggtggctctggatcacaaagcaaaaatgtctttggactgaaggtt
aaaaagaagaagaagaaagtcagcaaaggtctagtctttgcaaataaaggtgctcaagat
gattcggatattaaaagtggtgctgaagaaccttcaggtgcagaagctcaagtccctgaa
cctgtcagtgagccttatctctctgcctacttgtctttcagagaagttatcaatattaag
agagccaaaactgtgcccaagattttggaaagtgaaagcaaaccactcacttttcagatc
tccatcaacatcacagaggctagacagctggtgggtgagaatatcgaccccagtgtggtg
attgaaattggagatgaaaagaaacagacatcggtaaaagagggtaccaatgcacccttt
tacaatgagtattttgtgtttgacttcttcgtacaccaagagatatttttcgacaaagtc
attaaactatcagtcatgcattcgaagatcatgaaaagcttttgtgtggggacgtttaag
attgatgttagaactgtctacagtcagcctggtcatcagtttaccaataaatgggcagct
cttatagatcccacagacgtcaactcaggggtcaaaggtcacttaaagtgtgacatctgt
gtgacggcgaaaggagatgcattgccccgttctcagaagtttaaagacgctgaagagcaa
atcgaaaagaacccactgctgcctgaaggctttccatctatgcgcccatgggctcgctat
tatgtgaaagtgtaccgagcagaaggccttcccagaataaattctagcatcatggctaat
gtgaccagggcttttgttagtgacaacacagctcttatagatccatatgttgtggtgtca
ttcttcggacaggtgggccggacctccacgcagaagagtacagcagaccctgtatggaac
gagcaggtggtgtttaaagagatgtttcctcctttgtgtcagaggctaaagatccaggtg
ctggatgagggtagcatgaatgatgtagccatcggaactcactatattgatctgcgccga
atctccaatgaccaggatggagataatggtttcctccccacatttggtccagcctgggtc
aacatctacggatcagcccgtaactccacgatggtggatgacagtcaagacatgaatgag
ggaataggggaaggggtgtcatttcgaggaaggatttacctgcagctaactgtggagatc
ctgtctggaggggctgaatcaaaatctctgctctctatcaagatgcctaaagataaaggt
ggaaaagcaggagctaaggaccccaaagctgcagcaggaggggcaggtggaggtgaagag
gaaaaaggcaaggctacaggagccatggtgctgcctgtggatccacctgaaatgatcagt
gatgaggacaaggagaagttcctgctctttggtgttgtgtttgaggcagctatgattgac
aggaagattggtgacaaacctattagttttgaattcacccttggaaactttggtaacttt
attgacggtgctgctctaccagctgccaagaaaaaagtagagagaggtcctgatccttca
agccaagaagctgtcacgactactcctcttctggaaactcaaccatcaaaaacttgcaaa
tccaccacacctttagagaaacctgttataggagatggaatcaggaactacttatacata
cccattttaaacaagaaaccatgtatccatgtgtggagctcctgggaggactggacatac
cgcctttactattctaacatgctggacaggatcgccatcatgtttgaagagggagtcgcc
aaggtaacagaactggacaagctggtggacccatgtgcggaggcttttatacgtgctgtt
ttaaaagaattttgtaaggatgccagggaatttatcagttttgctgaaaacaaagtgaaa
ggaaacaatttgacgatgttggacaaaaagagacttattttgtgcaaacaggaactggag
aacatgataggagcagctggaagcatcactgaaccaaagagaaaggctctaactgtcaaa
gagatgctgagagaggcgcagaaactctctcatcgaatcagattcctggtggaagagccg
cagcacacactgccagatgtgtttgtctggatgctgagcaacaataaacgtgtagcatat
gcccgcatccctgcacgccatctgctttactctgataaacttgtggaaagagggagagac
tgtggcaaaataaaaactttgttccttaagcccccgtccaaacgtggagcagttgggtgg
atagtgcaggctaaactggatgtgtacctgtggctgggcagaagcagagagtcgtcccat
atgatggagaatctccctgcaggcttcgagccactggggggaacatcagtggaggatgga
ggctctcttcctgacagtttattttatagagaccatcacaggtttcagctgagggctcat
atgtaccaggctcgtgggctcatcgcagcagacaacacaggcctgtcagaccccttcgcc
agagtatccttccactcaaacacccagtgcacagcagtcattaaccagactcttactcca
acttggaaccagatgttgatggcaaataaggtgtctctgtatggagagctcactgacatt
gtacaagagccgcctcttgttgttgttgaggtctatgatgaagatgcagtgggcaaacca
gagtacctgggctccactatagctgtgccagtggtccggctcaacgaggagccttacaca
ccacctcagctgcagtacagtgctcttttttacggtagcatgtctggtggtgacatactt
ggagcgtttgagcttatccagacaggaaagcatccactacctgagatagatcagccagag
ggccagatctaccccgtgccttcatacatccgacctgtgctctgcaaatatcgaattgag
gtcctgttctgggggttgagggaactgaagaaggtgcagctccttcctgtggatcggccc
caggtctttattgagtgtgcaggaaaaggcgttaactcctctgtgatacaaagctacaaa
agcaacccaaacttctctgtgctcgtggacgcctttgatgtggagctgcctgagaatgag
tacctccaccctcctctcacaatcactgtggtggactggagagcctttggcagaagcact
ctggtgggcagccatgtcataaacaacctgaccctgttcaaatacacgcctccatcttta
ccaccttccagaccactgccacccgagccagccagtatagagcctgaaccactgcctgga
ccagagggcaccgaagcacaaaccggtgaggatatatacataaacatagagcagggggac
atcagcaaaccttctccaacacctgagccagtgcctcaggacaagaagcacagagtctct
acaaaaagcaagcgaagatctacaaaaagaaagaagcgcactgctgctgatgagtccgct
gacaacgtcattgactggtggtctaagtactatgcttcggttgagaagatccaaatgtca
aaacaaagggaagtcaacccatttccaaacatctatgaagctgtacctcctcttcacaac
ttgctcacagatggaatatccactatggctaagggaatgaaagacaggaaaaaggatttc
aacttcaagggtgtattggagcagaacaaagtcgcaactttaaagatttatgacaaagag
ctggaggcagagtttggcccttttgatgattgggtcaaaacattcgaactattccgtggt
aaggcaaatgaagaagagagctctggggttgagaggtttgttggaaagttcaaggctggg
ttttgtctatacaagctgcctgatggtgatcaagaaggttgtttggactctgaagagtat
aaaataagccacggtattccacccaacaactctgtaaacgttctgatccgagtgtacatt
gttgcagccaccaacctccatccagccgaccctgatggaaaggcagatccttatatcgtg
ctgaaacttggaaaaacagaaatcaaggacagagacaattacatcccaaaacaactcaac
ccagtgtttggcagatcttttgaaatacaagcctctttccctaaggaatccttactgaga
attctcatctatgattatgatgtcattggcggagatgatttgatgggagagacagcgata
gatttggagaaccgattttacagcagatacagagcaacctgcggcctcccaactgaatat
gccattgagggctacaatgcctggagagatgccataaaaccaactgatttgctgattaag
ctgtgcaaagaaaacagacttgacagccctcgctttactcctggtagaatcaccattgga
gaaaaggtttacactggaaaaacggtctttgttgatgaggatcaggtagttgagtcctat
gaacatttggcactaaaggtactccataggtgggaagatatgccaggtgtgggctgcaaa
ctagtgccagagcacatcgagacacgcaccctctacataaaggacaagccaggcatggac
cagggccatctgcagatgtgggtagatatctttcctatggacatgcctcatcctggaccc
cctgtggacatttccccccgaaaacccaaaggatatgaattgaggatcataatctggaac
acagaagatgtcattttggaggacaccaatttcataacgggccaacagtccagtgacatc
tatgttaaaggatggatgaagggccttgaagatgatggccaggaaactgatgtgcattat
aactctctcactggcgagggtaacttcaactggcgcttcgtattccctttcaactacctt
ccagctgagaaactggtagttgtaagcaagcgtgataacatcttttctctggacaagaca
gaacagaagctgcctgcagtcttagtgctacaagtgtgggattttgagagattgtcctct
gatgatttccttggttcagtggagttggacctgcatgggtttcctcgtggtgccaaaaca
gcaaaagagtgtaagatggacatgctaactaaccccggtgagaatatatccatcttccag
cagaaacgtgccaaaggctggtggccttttgtaaagactgaagaacttacgggaaaagtg
gaggctgaattccatttggtaacagctgaagaagctgagaagaatcctgtaggtcgagca
cgcaaggagccagaaccactagaaaaacccaatcgaccagatacaaccttctcttggttc
gtgaacccttttaagtgttttttccatctaatctggaagaactataagaagtacatcata
gctgctctggtgctgcttatcctggctctgtttcttgccttgctcttctacactctcccg
ggcgccatcagcaacaggattgtcagtggatga
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