Clarias gariepinus (North African catfish): 128524652
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Entry
128524652 CDS
T10780
Symbol
ajuba
Name
(RefSeq) LIM domain-containing protein ajuba
KO
K16682
LIM domain-containing protein
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgar03019
]
128524652 (ajuba)
03036 Chromosome and associated proteins [BR:
cgar03036
]
128524652 (ajuba)
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
128524652 (ajuba)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
128524652 (ajuba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
128524652
NCBI-ProteinID:
XP_053353312
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All DBs
Position
1:22768132..22776719
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AA seq
711 aa
AA seq
DB search
MERIGTKLKQKFKLADSGSVKFSKKKNELSNTNNNSNSVNSAAPGVTHLNPVTNPSPAST
AQFSLTCSPSIESSSGARSAKVVNSQRVSSCAASTNSPPVPEETGPSLEHHPVTIAPLRR
RSPQQRVSCYLPDTVEGRSACDQPKRTDLPQGEHADPQGAYSPNSRIALNQRRYSLELQQ
LVRRQQLLAQPPLSSMPPPYPTTGSVTRSGSAEPSFLPEPERHKRFSLQEALFYKRWSSG
GEPWDSGRPASLSHPPMRSHEGAGATCLFPSGSALSPCSSFSLQESVLASPRSSFASSTA
SGGGGGGGGGGGGTSGSPIGSPCSSNRTSGISLGYDSRHVSGPAQPLHFSSTQLVGATTG
HVYSTSGPGKAAAPPIEVWRDYLERTSGIGGGFQDGRHSYPPAGSSPAATEWWSSVEQRG
PRTESPGERMRHSDLPGTHYQQELTRLLLRDMTLEGDEQLEGLALREQPLSTSTPPAASV
SVAAKPQEEHVSLREPPLATDRQEFFGTCVKCGKGVYGADNACQALDSLYHTRCFTCVSC
GRTLRNKDFYNVSGSVYCKEDYMFSGFQAAAEKCCVCGHLILEQILQALGNSYHPGCFRC
TVCSKTLDGVPFTVDYLNNVYCVADYNKTFAPKCAACLQPILPAEGSEEILRVVSMNKDY
HFECYHCEECGKQLSDKPGSQCFPLDSHLLCHSCHMSRACASHNLPPHSTH
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggagagaatcggtaccaaactcaaacaaaaatttaaactggctgattcgggcagtgtc
aagttcagcaaaaagaaaaacgaactatccaatacaaataacaacagtaacagtgtaaat
agtgcagcgccaggtgtgacccacttgaaccccgtgacaaacccgtcacctgcgagtacg
gctcagttcagcctcacctgctcaccctccatcgagtcttcttcaggtgccaggtcggct
aaggtggtcaactcacaaagggtgtcttcttgtgctgcctccaccaactcacctcctgta
ccagaggaaactgggccttcgctcgaacaccacccagtgactattgctcccttgcggcgc
cgttcccctcagcagcgtgtttcctgctacctacctgacactgtggaaggccgaagtgca
tgtgatcagcccaagcgtactgatttgcctcaaggtgagcatgccgacccacaaggtgcc
tatagcccgaattctcgcatcgcactgaaccagcgacggtattctctagagcttcagcag
cttgtgagaaggcagcagctcctcgctcagcctccactctcttccatgccgcctccgtac
ccgacaactggctcggtcacccggtccggctctgccgaaccaagctttctgcctgaacca
gaacgccacaagcgcttctctctgcaggaggcactgttctacaagcgctggagctctgga
ggggagccatgggacagcggcaggccagcatcgctttctcatcctccaatgaggagtcat
gaaggtgctggggctacctgcctctttccttctggatcagcactaagcccctgctcctcc
tttagtctgcaggagtccgtattagccagcccacgttcaagcttcgccagcagcacagct
agtggaggtggtggtggtggaggaggaggaggagggggcacaagtggaagtcctattgga
agcccatgcagcagcaaccgcaccagcggcattagccttggctatgacagtcgccatgtt
tctgggcctgcccagccattgcatttctcctccacacagctagttggagccactactggg
catgtgtactcaacatctggccctgggaaagcagcagcgcccccgatagaggtgtggagg
gactatctagaacggacatcagggatcggcggaggttttcaagatggccgtcattcatac
ccaccagcgggcagttccccagctgcaacagagtggtggagtagtgtagagcaaagggga
ccacgaacagagagcccaggggagcggatgaggcattcagacctaccaggtacccactac
cagcaggagttgacacgcctcctactgagggacatgactctggagggagatgagcagctg
gaaggactagccttaagggagcagccactgtccacctctacacctcctgcagccagtgtg
tctgtggctgcgaaacctcaggaggaacatgtgtctctgagggaacctccattagccacg
gaccggcaagaattttttggaacatgtgtgaagtgtggaaaaggtgtgtacggggcagat
aatgcttgccaggctctggacagtctttatcacactcgctgttttacctgtgtgtcctgc
ggtcgcacactaagaaacaaggatttctacaatgtcagtggatcagtgtactgcaaggag
gattacatgttttctggcttccaggcagcagcagagaagtgctgtgtgtgtggccacctg
atcctggagcagattcttcaggccctgggaaactcgtatcacccaggctgtttccgctgt
acagtctgctccaagacgctggacggcgtgcctttcacagtggactacctcaataacgtc
tactgcgttgcagactacaacaagacattcgctcctaaatgcgctgcctgtttacagcct
attttacctgctgagggcagtgaggagattctcagggtggtatccatgaacaaagactat
cactttgagtgctatcactgtgaggagtgtgggaagcagctctccgataaaccaggctct
cagtgcttcccgttggactcccacctcctctgccactcctgtcacatgagcagggcgtgc
gcctctcacaaccttccaccacacagcacacactga
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