Clarias gariepinus (North African catfish): 128524690
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Entry
128524690 CDS
T10780
Symbol
ttll4
Name
(RefSeq) tubulin polyglutamylase TTLL4
KO
K16601
tubulin polyglutamylase TTLL4 [EC:
6.3.2.62
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cgar03037
]
128524690 (ttll4)
04812 Cytoskeleton proteins [BR:
cgar04812
]
128524690 (ttll4)
Enzymes [BR:
cgar01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.62 beta-tubulin-glutamate ligase
128524690 (ttll4)
Cilium and associated proteins [BR:
cgar03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
128524690 (ttll4)
Cytoskeleton proteins [BR:
cgar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylases
128524690 (ttll4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTL
ATPgrasp_YheCD
ATPgrasp_ST
Motif
Other DBs
NCBI-GeneID:
128524690
NCBI-ProteinID:
XP_053353380
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All DBs
Position
5:complement(27866024..27881780)
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AA seq
1104 aa
AA seq
DB search
MASTGAEDLRKGALQPTLVVQAKSATVHLSNTRVSSAHVEKKWHHPSAFGDSVTQPHVKV
VCEQPHHFSGISSPRASPSLPARVLRARSTGAHHSSSCCRDTRAHSVVLKNSVHVSSPST
VCQSTCHLDPITHAYQSHRHLNSLRIRSRLLGKRAFVPPLSIYPLCPSPPKTSNHKASAI
VDRTMPANQSCPWSSGKLGSNSNGVMHSSTAKVPTIARLETKDLKKASGLLSGKKECKAD
IIKHSQTTVPLEDKYTDVPPNHVSQLSEFDKIVAEDAKENEHIVECCMGHGAGEAFQRVR
NVSSEVEFTAAVRKLTKNMAHVRNGPLNGLSGPLTANFDSQHNRREVYASANPATQASRV
CLISGSEEFKVDEDPLCLDENSYSIGMSQGSGCAIPEDIDHTVVPPQSPTVYSVINQISA
IHLTKDCCQHTSEEDPSQCPMTLDEGSQPDIRGQVNVAVLEDGEEEELPDEMENLCSGNN
DDGSESDVSLAPSMAASSNIEEPMSCELEDDREVKPALVPSLFPFRSPTLYFSTANEQVE
LLPLEQRSLLKWKISTVTPNIVKHTITRSHFKVTKKNHDWLGCWGHHMKSPGFKAIREYQ
KLNHFPGSFQIGRKDRLWRNLSKMQTRFGKREFGFFPRSFVLPQDMKLLKKVWEEGGSRQ
KWIIKPPASARGMGIQVIHKWSQMPRKRPLLVQKYLHKPYLISGNKFDLRIYVYVTSYDP
LRVYIFNDGLVRFASCKYSSSMKSLGNKFMHLTNYSVNKKNSEYQTNSDDKACQGHKWAL
KALWQYLDSKGINTTLIWEKIKDMVIKTIIASDPYVNTLVKMHVRSSYSCHELFGFDIML
DENLKPWVLEVNISPSLHSNSALDVSIKGQMIRDVLNLAGFMLPKKEDVLVSSNNGCTSS
SSGSISKSSLYEGARVRSRSDLSPDEKLKRAFYLTQRFGDQDFSSTILEVLTPEDVRVLA
DSEDEHSRMGDFERIFPSSASSRYLRFFEQPRYLNLLLNQWEQKYNQNRSKGIELLRSLC
QKRVHLGNLADSVHHWSSKSKHGHRSDLQSTTIAKITKSSATRSQNTSSLMDEDEGDDEW
SDHDIQSVTSSIPDMSLMGSVSPK
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggcttccactggagctgaggacttgagaaagggggcattacagccaacccttgttgtc
caagcaaaatctgcaactgtgcatctttccaacactcgtgtgtcttctgctcacgtagaa
aagaaatggcatcatccttcagccttcggtgactctgtaacgcagcctcatgtgaaagtg
gtgtgtgagcagccccatcatttctcagggatatcctcaccgcgtgcctctccgtcgttg
cctgcgagggttttgcgtgctcgtagcacaggtgctcatcattctagcagctgttgtagg
gatacaagagctcacagtgtagtcttaaagaactcggttcatgtcagcagtccctctact
gtatgtcaaagcacttgccatctggacccaattacacacgcatatcagtcacacaggcac
ctgaactcactcaggataagatcgaggcttttaggaaaaagagcttttgtacctccgctc
tcaatttatcccctttgtccctctccacccaagacatccaatcacaaagcgtctgcgata
gttgacaggaccatgcctgcgaatcagtcttgcccgtggtcatcgggtaaactcggaagc
aacagcaatggggttatgcattcttccactgccaaggtgcctacaattgccaggctagag
acaaaagatttgaagaaggctagcggtctactttctggaaagaaagaatgcaaagcggac
ataataaagcacagccaaacaacagtgcctttagaggataaatacacagatgtgcctcca
aaccatgtttcgcagttgtctgagtttgacaagatagtggctgaggatgctaaagagaat
gagcatatagtggaatgttgcatggggcatggagccggtgaagcttttcagagagtgagg
aatgtcagctctgaggtagagttcactgcagcagtacgaaagctcactaaaaacatggca
catgtacgcaatggaccgctaaatggtcttagtggaccactgacagccaattttgattct
cagcataacaggagagaagtatacgcaagtgccaatcctgcaacacaagcctcaagagtt
tgccttattagcgggagtgaagagttcaaagtggatgaagatcccctttgcctagatgaa
aattcttatagtattggaatgtctcagggcagtggatgtgccattccagaggacattgat
cacacagtggtccctcctcagtctcccactgtttattcagtaataaaccagatatctgcc
atacaccttacaaaggactgctgtcagcacacttcagaagaggacccaagccagtgccct
atgactctggatgaggggagtcaacctgatatcagaggtcaggtgaatgttgctgtcttg
gaagatggtgaggaagaggagcttccagatgagatggagaatctctgcagtggcaataat
gatgatggatcagaatccgatgtctctttagcaccctctatggcagcgtcctcaaatatt
gaggagcccatgagctgtgagttagaggatgatcgggaggtgaagccagcactggtgccc
agtctgttccccttcaggtcccctacattatactttagtacagccaatgagcaagtggag
ttgctccctctggagcaaaggagtcttctgaaatggaaaataagtacagttacccctaac
attgtcaagcacacaatcactagatcccatttcaaagtcactaagaaaaaccatgactgg
ttgggctgctgggggcatcatatgaagtcacctgggttcaaggccatacgagagtaccag
aagctcaatcattttccaggttcctttcagatcggacggaaagaccgtctgtggcgaaat
ctttccaagatgcagacacggtttggcaagcgggagtttggcttctttccacgttccttc
gtgctcccgcaggacatgaaactgctgaagaaggtttgggaggaaggagggagccggcaa
aaatggatcatcaaaccgcctgcttcagcccgaggaatgggtattcaggttattcacaag
tggagtcaaatgccacgcaagagacctctccttgtgcagaaatatcttcacaagccctac
ctcattagtggaaataaatttgatctccgtatctatgtgtacgtgacttcttatgaccca
ctccgtgtttacattttcaacgatggactcgttcgcttcgcaagctgcaaatattcctca
tcaatgaaaagtctcggcaacaaattcatgcacttgacaaactacagtgtgaacaagaag
aactctgagtatcagactaacagcgatgacaaggcctgccagggccataaatgggcacta
aaggcactttggcaatatctggactcaaaaggaattaacacaacgcttatctgggagaag
attaaagacatggttattaaaaccatcattgcgtcagatccatatgtaaacacactggtg
aagatgcatgtgcgctcctcatatagctgtcacgagctgtttggttttgacatcatgctg
gatgagaacctgaaaccgtgggtcctggaagtcaacatctctcctagcttgcactccaac
agcgcgttggatgtgagtattaagggacaaatgatccgtgatgtgctgaacctagctggt
tttatgctgcccaagaaagaagacgttcttgtctccagcaataatggttgcacctccagc
agcagtggcagcatctccaagagcagtttgtatgaaggagcacgagtgagatcgagatca
gacctgtcccctgatgagaaactgaaaagagctttctatctcacccagagatttggggac
caggatttctcctccacaattttggaagtgttaacccctgaagatgtgcgtgttctggct
gatagtgaggatgagcacagtcgtatgggagactttgaacgcatcttcccttcctctgcc
tcctcccgctacctccgtttctttgaacagcctcgctacctcaacttacttcttaaccag
tgggaacaaaaatacaatcaaaatcggagcaaaggtatcgaactgctgagaagtctctgt
cagaaaagagtacacttggggaaccttgctgactctgtgcatcattggtcatctaaatcc
aaacatggacaccgttcagacctccagagcaccaccattgccaagattaccaaatcaagt
gcaacacggagtcagaatacaagttccctgatggatgaagatgaaggtgacgatgagtgg
tctgatcatgatattcagtctgtgacgtccagtattccagatatgtctctgatgggatca
gtgagcccaaagtga
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integrated database retrieval system
