Clarias gariepinus (North African catfish): 128525031
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Entry
128525031 CDS
T10780
Symbol
slitrk3b
Name
(RefSeq) SLIT and NTRK-like protein 3
KO
K25834
SLIT and NTRK-like protein 3
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128525031 (slitrk3b)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
LRR_14
LRRNT
Motif
Other DBs
NCBI-GeneID:
128525031
NCBI-ProteinID:
XP_053353458
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Position
1:51535244..51541099
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AA seq
857 aa
AA seq
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MLSTYGGTMLWIVLLSSVSVVLVRTTPIPLLDESEEIDEPCFHPCYCELKEGLFHVHCDG
KGFTNISQVAQSWIRPFKLYLQKNTLRKLYFNSFLHLNNAIAVNLGNNALQDIQAGAFNG
LSSLKRLYLHENKLEVFRNDTFLGLESLEYLQADYNVIRRIESGAFRHLHKLRVLILNDN
LIPALPPFLFRSISLTHLDLRGNRLKSLSYRGALEYIGRNLMEIQLEENPWNCACDIVQL
RAWLDRIPYTSVVGEITCEYPFHLHGKDLREIKRRELCPNLTDAEIEASLGIPHSLGRAR
PTKPSSMFSANQNTVSSVEQKNVKPTRRPRPSKTPPTPRSMYPNHPPIAGYETRPPIPII
CPIGCTCNLHINDLGLTVNCKENGFHNVSELTPRPLNAKKLYLSGNLIQRIHRSDFWNFS
SLDLLHLGNNKIFYIQEGAFGNLPNLRSLYLNGNNIEKLMADMFYGLQNLHYLYFEYNEI
KEVQPAAFSPMPALQLLFLNNNLLHSLPIGTFEGTSLARLNLRNNYFPHLPVGGVLEHLH
AVVQIDLNQNPWDCACDIVPLKQWLETLSSVVIVGEVLCKTPDAMLGKDLRSVTPEGICP
ELLQPSLSPDEHEMEFSPSFPPKAVIPLSVLVLSLVVLLVSSFFAAAALCTFVMKKRDKL
PFRKQEEAGLTGIQMECGIFTETPPTLPETPPSNHVYECISVPSSQCAAYERGRDGAEPI
GLCKEEAGPMECKLEGADCGESSSNYRTALEKEEEWTTIVSHAPINTVTDIAGFHGNGIL
CPTVIDSQGPTPKVGLVHSLFGTSSWLGDISPKQAVTTDIEPRTDCANQTASGYPNLSAR
LKTKMDYVEALERSYQF
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgttgtccacgtacggaggaacgatgctgtggatcgtccttctaagcagcgtcagtgtc
gttctcgtccggacgactcccatccctctgttggatgaatcggaggaaatcgacgaacct
tgcttccatccatgctactgcgagttgaaagagggcctgttccatgtccactgcgatggc
aaaggtttcaccaacattagccaggtggcccagtcctggatcagacctttcaagctgtac
ctgcagaagaacacgctgcgcaagctgtactttaacagcttcctgcacctgaacaacgcc
attgccgtgaacttgggcaacaatgcgttgcaagacatccaagccggtgcatttaatgga
ctgagctctttgaagaggctttatctccacgagaacaagctggaggtgttccgcaatgac
acgttccttggcctggagagcctggaatacctgcaggctgactacaatgtcatcaggcgg
atcgagagcggcgcttttagacacctccacaaacttcgggtgctgatcctcaatgataac
ctgatacctgctttacctccgttcctcttcagatccatttcccttacacacctggacctg
agaggaaaccgcctcaagagcctgagctaccgaggagccctggagtacattgggagaaac
ctgatggagattcagctggaggagaacccctggaactgcgcttgtgatattgtccagctg
cgggcctggctggatagaataccatacacatctgtggtgggtgagatcacctgcgagtac
ccctttcacctgcatgggaaagacctgcgagagatcaagcggcgtgagctctgcccgaac
ctgactgatgccgagattgaggctagtctgggaatccctcattcgttaggaagagcgaga
ccaaccaagccttcgtctatgttctctgcaaaccagaatacagtgtcatctgttgaacag
aagaatgtgaaaccgacgcgaaggccaaggccatcaaaaaccccgcccactcctcgcagc
atgtatccaaaccacccgccgatcgccgggtacgaaacaaggccacccatccccatcatc
tgccccattggctgcacctgcaacttgcacatcaacgatcttggcttgaccgtgaattgc
aaggaaaacggctttcacaacgtttctgagctaacgccacgaccgctaaatgcaaagaag
ctctacctgagtgggaatctgattcaaaggatacacaggtctgacttttggaatttttcc
agtctggatttattgcacttgggaaataataaaatattttacattcaggaaggggcattt
ggcaacttacctaatttacgcagcctgtacctaaacgggaataacatcgagaagctaatg
gcggacatgttctatggcctgcaaaaccttcactacctgtattttgaatataacgaaata
aaggaagttcagccggcagcgtttagcccgatgcctgcgcttcaacttttgtttcttaat
aacaatcttctacattcacttcctataggcacttttgaaggaacttcgcttgctcggctc
aacctgcgcaacaactacttccctcatctgcctgtgggtggggttttggagcacctacat
gctgtggtgcaaatcgacctgaatcagaacccctgggactgtgcgtgcgacattgttcca
ttaaaacagtggctggagacattgagctctgtggttatagttggcgaggtgctatgtaaa
actccggatgccatgctgggaaaagatttgcgctctgtgaccccggaggggatttgcccc
gaacttttacaaccgtccttgtccccggatgaacatgagatggagttttctccctcgttc
cctcctaaagctgtcattcctctttccgtgctcgtcctaagcctcgtcgttctgctagtc
tcgtcattctttgccgcggctgcactttgcacgttcgtcatgaaaaagcgtgacaagctt
ccttttagaaagcaggaagaggcggggctaactggaattcagatggagtgtggaatattc
acagaaactccaccgacactgcctgaaactccaccctctaatcacgtctatgagtgcatc
agtgtgccgtcttcacaatgtgcggcttatgagcgggggcgagatggggcggaacctata
gggctttgcaaggaggaggcagggccgatggagtgcaagttggaaggggctgattgcgga
gagagcagctccaattacaggacggcgctggaaaaagaggaggagtggacaactatagta
agccatgctccgatcaacaccgtaacggatatcgctggtttccacgggaacgggatactc
tgtccgactgtgattgacagccaaggcccgactcctaaagtgggattggtacacagcctt
ttcgggaccagttcctggttaggggacatcagtccaaagcaagcggtcacaacggacata
gagccgaggacagactgcgctaatcaaaccgcaagcggttaccccaacctcagcgcgaga
ctgaaaaccaaaatggattacgtcgaggccctggagaggtcgtatcagttttaa
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