Clarias gariepinus (North African catfish): 128526035
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Entry
128526035 CDS
T10780
Symbol
cacna2d2a
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2a isoform X1
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04010
MAPK signaling pathway
cgar04260
Cardiac muscle contraction
cgar04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128526035 (cacna2d2a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
128526035 (cacna2d2a)
04261 Adrenergic signaling in cardiomyocytes
128526035 (cacna2d2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128526035 (cacna2d2a)
Ion channels [BR:
cgar04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
128526035 (cacna2d2a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
MCP-like_PDC_1
Cache_3-Cache_2
vWA-TerF-like
Motif
Other DBs
NCBI-GeneID:
128526035
NCBI-ProteinID:
XP_053353545
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Position
6:25000640..25242878
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AA seq
1112 aa
AA seq
DB search
MAICAQPSSLFWLFSVQTVLLLCVSWPGTATLRFPQQYTMMHWASRIEKELEKVLPQVTG
VHQMKSIYLEKRSQFDVKRNTPKDLVDRVAKDIAKLLNSKRKALERLAREAELIQTLHPW
RDNISASAIEYYDAKAESDYSEDSDEASQLDILKSISLEFVDDPNFKNKVNYSYTAVQIP
TDIYKGSPTILNELNWTQALERVFIDNSREDPSLRWQVFGSATGVTRYYPATPWRAPNKI
DLYDVRRRPWYIQGASSPKDMVIIVDVSGSVSGLTLKLMKTSVIEMLDTLSDDDYVNVAQ
FSEKADAVVPCFKTLVQANVRNKKIFKEKVMHMQAKGTTDYKSGFQFAFEQLLNETSAPR
ANCNKMIMMFTDGGEDRAQEVFEKYNWPNKTVRVFTFSVGQHNYDVTPLQWIACANKGYY
FEIPSIGAIRINTQEYLDVLGRPMVLAGNRAKQVQWTNVYQDALGLGLVITGTMPVFNLT
SDGDSKNQLILGVMGVDVALSEIKQLTPQYKLGANGYTYAIDPNGYVLLHPNLQPKIINF
REPVTLDFLDAELPDNNKEEIRRHMIDGKPGQKKIKTLVKSVDKRYIDQVTRTYIWAPVD
GTDYSLGLVLPTYSENYIRANLSDQILQVQLKDTTDFESLLPHTFESEGHVLIAPREYCK
DLELSGNNTEFLHNFIALMEKVTPDSKQCDNFLLHNLILDTGIIRQLVEKVWKTKDLNTY
GFLAVFAATDGGITRIFPNKAAETWEEDPEPFNASYYRRSLDNKGYIFRAPYRSPNAIYQ
DQENDTIGILVSTAVDIAVGSRNIKPAVVGVKLDLEAWTSKFKILASNHTDNIRQGSQMC
GPTSGCEMDCEAHEDLLCYLIDDGGFLIMSNQNQDWNKIGMFFSEVDPALMHVLYNNSFY
ISKESYDYQSVCGPVPNSNTGAAPRGVFVPTIADLLNVAWWTSAATWSLFQQLLYGFAYH
SWFVTDDVYAAETMDSRETSCVTIQKQFYFGNISSAYSIVQDCENCSRLIHAKRLNNTNL
LFVVAEKLPCNTCDIEKLSQGEKELKQEDPCLDVPTPRYRKGPSTCFDYNVAENTTDCGR
GHSFRPSILTLLLLQLLAFSLMACPHVLPFSL
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctgcgctcagccctcgagtctcttctggctcttctcggtgcaaacggtgttg
cttctgtgtgtgtcctggcccggaacggcgacgcttcgcttcccgcagcagtacacgatg
atgcactgggcaagccgtatagagaaggaactggagaaagttctaccccaggtcacagga
gtccaccagatgaaatcaatctaccttgagaaaagaagtcagtttgatgtaaagaggaac
acgcccaaggacctggtggacagagtggctaaggacatcgccaagctgctgaacagtaaa
cgcaaagcactcgagagactggccagggaggcagagctgatccagacattgcacccctgg
agggacaacatttcagcgagcgcaatagagtactacgatgccaaggctgagtccgattat
tctgaagatagcgacgaagctagccagttggatatcctgaagtccatttcgctggagttt
gtggacgaccccaatttcaaaaacaaagtcaattactcctacactgctgtccagatccca
actgacatctacaaaggctctcccactatcctgaacgagctgaactggacgcaggcactg
gagcgtgtgtttatcgataacagcagagaggacccctcactgcgctggcaggtcttcgga
agcgccaccggggtcacgagatactacccagctacaccatggagagcccccaacaagatc
gacctgtacgatgtacggaggcggccatggtacattcaaggcgcctcttctcctaaagat
atggtcatcattgtggatgtgagcggtagtgtaagtggactgactttgaagctgatgaag
acctctgtgattgagatgctggacacactgtctgatgatgattatgtaaatgtagcacag
tttagtgaaaaagcagacgccgttgtgccgtgctttaagacgctggtccaagctaatgtg
agaaacaaaaagatcttcaaagagaaggtgatgcacatgcaagcgaaggggacgacggac
tataaatccggctttcagtttgcttttgagcaactgttaaatgagaccagcgctccaagg
gcaaactgcaataagatgataatgatgttcacagatggcggagaggatcgagctcaagag
gtcttcgagaagtacaactggcccaataaaacagttcgagttttcactttttctgtgggg
cagcataactacgacgtcactccgctgcagtggattgcgtgtgccaacaaaggatactac
ttcgagatcccttccatcggagcaatcaggatcaacacacaggagtatctagacgtcctg
ggaaggccgatggtgttagcaggcaaccgggctaagcaagttcagtggaccaacgtgtac
caggatgctctgggcctgggtttggtcattactgggacgatgccggtcttcaatcttact
agtgatggagactcgaagaatcagctaattctgggagtcatgggagtggatgttgcactt
agtgaaattaagcagctcacaccacagtataaacttggagccaatggttacacttatgcc
atagaccccaatggctacgttctgctacacccaaacttacaacctaagatcattaatttc
agagaaccggttacacttgacttcctggatgcagagctgccagacaacaacaaggaggag
attcgtcgacatatgattgacgggaagccaggtcagaagaaaatcaagacattagttaag
tctgtagacaagcgatacattgaccaggtcacgaggacttatatatgggcaccagtagat
ggcacagattacagtctcggtttggtgctgcccacatacagtgagaactacatcagggcc
aacctcagcgatcagatcctgcaagtccagttaaaagacaccacggattttgaatctctc
ctgccacacacttttgagtcagagggacatgtgttgatagccccaagggaatactgcaaa
gacctggaactttctggcaacaacacggagttcctacacaacttcatcgctctgatggag
aaagtcactccagactccaaacaatgtgacaactttctgctgcataacctaatcctggac
actggcatcatcagacagctggtggagaaagtgtggaaaaccaaggacctcaacacatat
ggatttttggccgtctttgcagctacggatggaggcatcacccgtatctttcccaataaa
gctgctgagacctgggaggaggatccagagccatttaatgccagttactaccgccgcagt
ctggacaacaagggttacatctttagagcaccatatcgtagcccaaatgcaatctaccag
gatcaggagaatgacacgattggcatcctggtcagtacagctgtcgacattgcagtgggc
agcagaaacatcaagccggctgttgtgggtgtaaagttggaccttgaagcttggacttcg
aaatttaagatccttgccagcaaccacactgataacattcgacaaggttctcaaatgtgt
gggccgaccagtggctgtgagatggactgcgaggcccatgaggacttgctgtgttacctg
attgatgacggtggcttcctcatcatgtccaatcagaatcaagactggaacaagatcggc
atgttcttcagtgaggtggacccagctctgatgcatgtcctctacaacaactccttctac
atctccaaggagtcttatgattaccagtctgtgtgcggccctgtgcctaacagtaatacc
ggagccgcacctagaggagtatttgtgcccactattgcagacctgctaaacgttgcctgg
tggacttcagcagctacatggtctctgtttcagcagctcctttatggttttgcataccat
agctggttcgttacagatgatgtttatgcagcagagaccatggactccagagagactagc
tgcgtcacaatacagaagcagttctactttggaaacatcagcagtgcctacagcatagtg
caagactgtgagaactgctccaggttgatccatgccaagaggttaaacaacaccaacttg
ttatttgtggtggctgagaagctgccctgcaacacctgtgacatagagaagctgtctcag
ggtgagaaagaattaaaacaagaagacccgtgtctggacgtgccaacacctcggtataga
aaagggccctctacttgttttgattacaacgttgcagagaacaccacagactgtggacga
ggacactctttccgcccgtccatcctcactttactcctcctccagctgctcgccttctct
ctaatggcctgccctcatgttttgcctttctctctttaa
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