Clarias gariepinus (North African catfish): 128526061
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Entry
128526061 CDS
T10780
Symbol
rpsa
Name
(RefSeq) 40S ribosomal protein SA
KO
K02998
small subunit ribosomal protein SAe
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
128526061 (rpsa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cgar03011
]
128526061 (rpsa)
Ribosome [BR:
cgar03011
]
Ribosomal proteins
Eukaryotes
Small subunit
128526061 (rpsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S2
40S_SA_C
Motif
Other DBs
NCBI-GeneID:
128526061
NCBI-ProteinID:
XP_053353595
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All DBs
Position
6:complement(40629924..40633109)
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AA seq
317 aa
AA seq
DB search
MSGGLDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYVYKRKSDGIYIINLKKTWEKLLL
AARAIVAIENPADVCVISSRNTGQRAVLKFASATGATTFAGRFTPGTFTNQIQAAFREPR
LLIVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGPHSVGLMWWMLAR
EVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVGKEEFQGEWSAPVADIAQ
LEVPDWSEGVPVPSVPIQQFPAGIEAAAATAAVVAAKPGHTAEGYSEDWSAQPATEDWSA
APTAQAGDWGGSTAEWS
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaggtctggatgtccttcagatgaaggaggaggatgtgctgaagttcctcgct
gcaggaacccatctgggtggaaccaacctggacttccagatggagcagtatgtctacaag
agaaaaagtgacggcatttacatcatcaacctgaagaaaacatgggaaaagctgctgctg
gctgctcgcgccattgtcgctattgagaaccctgctgatgtttgtgtcatttcttccagg
aacactggccagagggcggtgcttaagtttgcctctgccactggtgccaccaccttcgcc
ggacgcttcacaccaggtacatttactaatcagattcaggctgccttcagagagccccgc
ctcctgatcgtgactgaccctcgtgctgaccaccagcctctgactgaggcttcgtacgtg
aacatccccaccatcgctctgtgcaacactgactctccactcagatacgttgatattgcc
atcccctgcaacaacaagggtcctcactctgtgggtctgatgtggtggatgttggcccgt
gaggtgctgaggatgcgtggtaccatttcccgtgagcatccatgggaggtgatgcctgat
ctgtacttctacagagatcctgaagagattgagaaggaggagcaggctgcagcagagaag
gccgtgggtaaggaggagttccagggcgagtggtccgctcctgtggccgacatcgctcag
ctcgaggtgcctgactggtctgagggtgtgcccgtcccatcggtgcccatacagcagttc
cccgctggcattgaggctgctgctgccaccgctgctgttgtcgctgctaagcccggccac
accgctgagggttactctgaggactggagtgcacagcctgccactgaggattggagtgca
gcccccaccgctcaggctggagactggggtggctccactgctgagtggtcctaa
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