Clarias gariepinus (North African catfish): 128526085
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Entry
128526085 CDS
T10780
Symbol
sox19b
Name
(RefSeq) transcription factor Sox-19b
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128526085 (sox19b)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128526085 (sox19b)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
128526085
NCBI-ProteinID:
XP_053353638
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All DBs
Position
1:complement(32692284..32694205)
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AA seq
294 aa
AA seq
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MMYSMMEHELKTQPGQQNPHPNGQLMSQHGGSGNVPQAAPKSACPPGADPMDKVKRPMNA
FMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAAHMKEYPD
YKYKPRRKSKPPVKKDNSAAKYPPLPGGSLLAAAHAQSGSPRVDSYGWAPAGSYAAVQGD
ALAYQQQLHRYELPLQYAAPMSQTYMNSANSYSPMSYSSSPQQPSPVMSMVKPEAFTHSP
TGATNHHRGAVQGDLRDMISMYIPGGDVGDPTAQRGYPSVQQHYLGSTVPLTHI
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacagcatgatggagcacgaacttaaaacccagccgggtcaacaaaatcctcac
ccgaacggccaactcatgtcgcaacacggcggctccggaaacgtgcctcaggcagctccg
aaaagcgcgtgcccgcccggcgcagaccccatggacaaagtgaagcggcccatgaacgcg
tttatggtgtggtcccgagctcagaggcgcaagatggcccaggagaacccaaagatgcac
aactccgagatcagtaagcgcctgggcgccgagtggaagctgctgaccgacgccgagaag
cggccgttcatcgacgaggctaagcggctgcgcgccgcgcacatgaaggagtaccccgac
tacaagtacaagcctcggcgcaagagcaagccgccggtgaagaaggacaactctgcggcc
aagtaccctccgctgcccggcggcagcctgctggccgcggcgcatgcgcagagtggaagc
ccgcgcgtggacagctacggctgggctccggctggaagctacgcggccgtacagggagac
gcgctcgcttaccaacagcagctgcaccggtacgagcttcctctgcagtacgcggcgccc
atgtcccagacctacatgaacagcgccaactcctacagcccaatgtcatacagcagcagt
ccccagcagcccagccctgtaatgtctatggtcaagcctgaggccttcactcactccccg
acaggagcaacaaaccaccaccgtggggcagttcaaggcgaccttagggacatgatcagc
atgtacatccctggaggtgatgtaggggaccccacagcacagcggggttacccaagtgtc
cagcagcattatctgggcagtactgtgcccctgacgcacatctga
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