Clarias gariepinus (North African catfish): 128526111
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Entry
128526111 CDS
T10780
Symbol
itgb7
Name
(RefSeq) integrin beta-7
KO
K06590
integrin beta 7
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04510
Focal adhesion
cgar04512
ECM-receptor interaction
cgar04514
Cell adhesion molecules
cgar04672
Intestinal immune network for IgA production
cgar04810
Regulation of actin cytoskeleton
cgar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128526111 (itgb7)
04514 Cell adhesion molecules
128526111 (itgb7)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128526111 (itgb7)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128526111 (itgb7)
04810 Regulation of actin cytoskeleton
128526111 (itgb7)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
128526111 (itgb7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128526111 (itgb7)
04515 Cell adhesion molecules [BR:
cgar04515
]
128526111 (itgb7)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128526111 (itgb7)
Cell adhesion molecules [BR:
cgar04515
]
Integrins
Integrin beta subunits
128526111 (itgb7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
EGF_2
I-EGF_1
EGF_integrin
EGF_TEN
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
128526111
NCBI-ProteinID:
XP_053353669
LinkDB
All DBs
Position
6:555346..583775
Genome browser
AA seq
745 aa
AA seq
DB search
MRFILAFAFALHSVPLRCAAGPSPVSQQHSTCSECVKIPGRAWCMQQNFLKKWESDGRRC
DSAQFLKERNCKEVYEPTPNTYLMKTNDLSSDLKNVVQLKPQSLEVKLRLGVPHDFNVEF
KRAEGYPIDLYYLMDLSYSMKDDLEKIKSLGQDILDTLLKHTQTVRIGFGSFVDKVKLPY
VSQVKAKRKNPCPTRTDTCQPAFTFQNILNLTNDAEKFKKEVSKQKISGNLDSPEAGLDA
IMQAAVCEEIGWGNETRILVYTSDDTFHMAGDGRLAGIFTPHDGKCHLKSDSYDGTLFDY
PSVGQLSQVLQDNNIQLIFAVTENIFPAYQALSALIPQSVVGVLKDDSSNVVQLISEAYG
NLSSTLLLEHNIRLPGLNVSYQSHCGDSASSAWQHRGECTGIRNQKVSFTVRLNASECLS
EPKIFEIQVKGINERLKVHVTTICDCNCNQKEHNSTHCSGNGTLECGVCRCNEGYLGQRC
QCKSTSDTAMRMSCRSDNSSQECSGRGSCECGECVCMEMFSGPYCECDDFSCSRHNGVMC
NGKGKCKCGKCQCEKHYIRPGCECNNSTDKCPQKYGKLCSGHGECTCNSCDCNDGFLGLD
CTEITNPCQKYLPCLVCTRSKNCTEADCKSVHVYQKEGYHVLGCLHGSISYDVGLDDKGH
VLITYADLPRSVDKTKVIIGSSVSGIIFIGILIIIIYKILLELYDRREYSNFLRAQENTK
WEGGNNPLYKGATTTVLNPLHSQDN
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgaggtttattctagcctttgccttcgctcttcactcagtaccactgagatgtgcagca
ggtccctctccagtgtctcagcaacactctacctgctctgaatgtgtaaagattccagga
cgtgcgtggtgtatgcagcagaatttcctgaaaaaatgggagtcagatggacgcagatgc
gactccgcccagttcctgaaggagaggaattgtaaagaggtgtacgagcccacacccaat
acctacctcatgaaaaccaatgacttgagcagtgacctcaaaaacgtggtgcagctcaaa
cctcaaagtctggaagtcaaacttcgactcggtgtgccacatgattttaacgtggagttt
aagagggctgagggttaccccatagacctgtactatctgatggacctgagctactccatg
aaggacgatctggagaagattaagagcctcgggcaggacattctggacacgctgctgaaa
cacacacagactgtccgcatcggttttggctcattcgtcgacaaggtgaaactaccgtat
gttagccaggttaaggccaagagaaagaacccgtgtcccactcgcacagacacctgccag
cccgccttcaccttccagaacattctcaatctgaccaacgatgctgaaaagtttaagaaa
gaagtcagcaaacagaagatctctggtaacctggactcacccgaagctgggttagatgct
atcatgcaggctgctgtgtgtgaggaaatcggctgggggaatgagactaggattctggtc
tacacctctgatgacacctttcacatggcaggagatgggcgacttgctggaatatttaca
ccgcatgatggaaagtgtcatcttaaatccgactcttatgacggcacgctgtttgattat
ccgtcagtgggccagctctctcaggttctccaggataataacattcagctgatcttcgca
gtgacagaaaacatctttccagcttatcaggcgctgagtgcgttgattcctcagtcggtg
gttggtgtgttgaaggacgactccagtaacgtggtccagctgatctctgaggcgtacggg
aacttgtcttccaccctgctgttggagcacaacatccgtcttcctggtctcaacgtgtcc
taccagtctcactgcggggactcggcgagctcggcgtggcagcacaggggcgagtgtacg
ggcatccgaaaccagaaggtttccttcaccgtgcgtctcaacgcgtctgagtgtctgtct
gagccgaagatctttgagatccaagtgaagggcattaatgagcgtctgaaggttcacgtc
acgacgatatgtgactgtaattgtaatcagaaagagcacaactccacacactgttcagga
aacggaacactcgaatgtggagtctgcaggtgtaatgaaggttatttaggtcagcgctgt
cagtgtaaaagcacgagtgacaccgccatgcgtatgtcctgtcgctctgacaacagctct
caggagtgcagtgggcgtggctcgtgtgaatgcggggagtgtgtgtgcatggaaatgttc
agtgggccgtactgcgagtgtgacgacttcagctgcagccgccacaacggagtgatgtgc
aatggtaaagggaagtgtaaatgtggtaagtgtcagtgtgagaagcactacattcgccct
gggtgtgaatgtaataacagcacggataagtgtcctcagaaatacgggaagttgtgtagc
ggtcacggagaatgtacgtgtaacagctgtgactgtaacgacggcttcctgggactcgac
tgcactgagatcactaacccatgtcagaaatacctaccctgtttggtctgtacacgctca
aagaactgcacagaggcggactgtaagtcagtccatgtgtaccagaaggagggctaccat
gtgctggggtgtctccacggctccatcagctatgacgtgggtctggacgataagggccac
gtgctgatcacgtacgctgacctaccacgttctgtggataaaactaaagtgatcatcggc
tccagcgtttcaggcatcatcttcatcggcatcctcatcatcatcatctacaaaatcctg
ctggagctttatgaccgccgggaatacagcaactttctcagagctcaggagaacaccaag
tgggaggggggaaacaatcctctgtacaagggagccacgactacagtcttaaaccccctg
cactcccaggacaactga
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