Clarias gariepinus (North African catfish): 128526298
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Entry
128526298 CDS
T10780
Symbol
cyfip1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04810
Regulation of actin cytoskeleton
cgar05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
128526298 (cyfip1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128526298 (cyfip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgar03019
]
128526298 (cyfip1)
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
128526298 (cyfip1)
Factors involved in mRNA localization
Other mRNA localization factors
128526298 (cyfip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
MauJ
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
128526298
NCBI-ProteinID:
XP_053353988
LinkDB
All DBs
Position
6:complement(2852362..2871398)
Genome browser
AA seq
1253 aa
AA seq
DB search
MTTTVSLEDALSNVDLLEELPLPDQQPCIEPLPSSILYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRTAIDRFCGEVRRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMSEPSSIQESQNLSMFLANHNKITQSLQQQLEVIHGYEELLAD
IVNLCVDYYENKMYLTPEEKHMLLKVMGFGLYLMDGNSSNIYKLDAKKRINLTKIDKFFK
QLQVVPLFGDMQIELCRYIKTSAHFEENKSRWSCTSAGSSPQYNICEQMIQIREDHMRFI
SELARYSNNEVVTGSGRQEAQKTDSEYRKLCDLALQGLQLLSQWSAQVMEVYSWKLVHPT
DKYSNKECPDNAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTI
YAALQDFAQVTLRDPLRQAIKKKKNVIQSVLQAIRKTICDWETGREPHNDPALRGEKDPK
GGFDIKVPRRAVGPSSTQLYMVRTMLESLVADKSGSKKTLRSGLEGPTILDIEKFHRESF
FYTHLLNFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSVPWILTDHILDIKEASM
MEYVLYPLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKVLAGS
LLLDKRLRAECKNQGANISWPPSNRYETLLKQRHVQLLGRSIDLNRLITQRVSAALYKSL
ELAINRFESEDLTSIVELEGLMEINRMTHKLLSKFLTLDSMDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKPPNAQPQYLYGSKPLNLAYSS
IYGFYRNFVGPPHIKAMCRLLGYQGIAVVMEELLKVVKSLLQGTILQYVRTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAVLFCLLSEQSLSQEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLEAKYTALHMVPLIERLGTPQQIAIAREGDL
LTRERLCCGLSMFEVILARIRGFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGAHEFTVEQCFGDGLNWAGCMIITLLGQQRRFDIMDFSYHLLKVQKHDGKDEIIKSVP
LKKMVDRIRKYQILNDEIFAILNKYLKSGDGENMPVEHVRCFQPPIHQSLASN
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacggtgtctctggaggacgctctgtccaacgtggacctgctggaggagctt
ccacttcctgaccagcagccctgcatcgagcccctgccctcgtccatcctgtaccagccg
aacttcaacaccaactttgaggatcgaaatgcgtttgtgaccggcatcgcccgctacatc
gagcaggccaccgtccactccagcatgaacgagatgttggaggagggtcaggagtacgca
gttatgctgtacacgtggagaagctgctctcgcgccatccctcaggtgaagtgtaacgag
cagcccaacagagtggagatctacgagaagaccgtagaggtgctggagcccgaggtcacc
aagctcatgaacttcatgtacttccagcgcaccgcgatcgatcgtttctgcggcgaagtg
cgtcgcctgtgtcacgccgagcgcaggaaggacttcgtgtccgaggcgtacctgctcacg
ctggggaagttcatcaacatgttcgccgtcctggacgagctgaagaacatgaagtgcagc
gtcaagaacgaccactcggcctacaaacgggcggcgcagttcctgaggaaaatgtccgag
ccatcgtctatccaggagtctcagaacttgtccatgtttctggccaaccacaacaagatc
acacagtccctccagcagcagttagaggtgattcacggctatgaggagctcctggctgac
atcgtcaacctctgcgtggattactacgagaacaagatgtacctcacgcccgaggagaag
cacatgctgctcaaagtcatgggcttcgggttgtatctgatggacggaaacagcagcaac
atctacaaactagacgccaagaagaggatcaacctgaccaaaatcgacaagttctttaag
cagttacaggtggtccctctgttcggggacatgcagatcgagctgtgccgctacatcaag
accagcgctcacttcgaagaaaacaagtccaggtggtcctgtacgtcagcaggcagcagt
cctcagtataatatctgtgagcagatgattcagatacgtgaggatcacatgcgcttcatc
tcagagttagctcgctacagcaacaacgaggtcgtgacaggatccggacgccaggaagct
cagaagacagactccgagtacaggaagttgtgtgacctcgccttgcagggtcttcagctg
ctctctcagtggagtgctcaagtcatggaagtgtattcctggaagctggttcatccgact
gataaatattccaacaaggaatgtccggacaacgcggaggagtacgaacgcgccaccaga
tacaactacaccagtgaggagaagttcgctctggtagaggtgatcgccatgataaagggg
ctgcaggtgctgatgggccgtatggagagtgtgtttaatcacgccatccgccacaccatc
tacgccgcgctgcaggacttcgcccaggtcacgctgcgcgacccgctgcgccaggccata
aagaagaagaagaacgtcatccagagcgtcctccaggccatccgtaagaccatctgtgac
tgggagaccgggcgagaacctcacaacgacccggctctgcgcggagagaaggatcccaaa
ggggggtttgatatcaaagtgccgcgccgcgccgtcggcccctcaagcactcagctctac
atggtgaggacgatgctggagtctctggtagcggacaagagcgggtcgaagaagacgctg
cgcagcggcctggaaggaccgaccatcctggacatcgagaagttccaccgggagtccttc
ttctacacacacctgctgaacttcagcgagaccctgcagcagtgctgtgatctgtcccag
ctgtggttccgtgagttcttcctggagctcaccatgggtcggcgtatccagttccccatc
gagatgtccgtgccctggatcctcaccgatcacatcctggacatcaaagaggcttcaatg
atggagtatgtgctgtatcctctggatctgtacaacgacagtgcacactacgctctcacc
aagttcaagaagcagttcctgtatgatgagatcgaggctgaggtgaatctctgcttcgac
cagtttgtctacaagcttgctgatcagatttttgcttattacaaggttctggcaggaagt
ttgcttctggataagagactccgagcagaatgtaaaaaccagggtgccaatatttcctgg
cctccttccaaccgctacgagacactgctgaagcagagacatgtccagctcctgggtcgt
tccatcgacctgaaccgtctcatcactcagcgagtctccgccgcgctctacaaatccctg
gagctggccataaaccgcttcgagagtgaggacctcacctccatcgtggagctggagggt
ttgatggagattaaccggatgacccacaagctcctgagtaagttcctgacgctggacagc
atggacgccatgttccgcgaggctaaccacaacgtctccgctccgtacggccggatcacg
ctgcacgtcttctgggagctcaactacgacttcctgcccaactactgctacaacggctcc
accaacaggtttgttcgtacagtgttgccgttctcccaggagttccagagagacaaaccg
cctaacgctcagccacagtacctttatgggtcaaagcccctgaacttggcctacagcagt
atctacggcttctacaggaacttcgttggtcctcctcacatcaaggcgatgtgcagactg
ctggggtaccagggcatcgccgtggtgatggaggagctgctcaaggtggtcaaaagcctg
ctccagggcaccatcctgcagtacgtcaggactctgatggaggtgatgccgaagatctgc
cgtctgccacgccacgagtacggctctccagggatcctggagttcttccaccaccagctg
aaggacatcgtggagtacgccgagctgaagaccgtgtgcttccagaacctgagggaggtt
ggcaacgccgtgctgttctgtctgctcagtgagcagagcctgtctcaggaggaagtgtgt
gacctgctgcacgctgcacccttccaaaacattctgccccgggtccatgtcaaagagggc
gagcggttggatgcaaagatgaaacggttggaggccaaatacacggcgctgcacatggtg
cccttgatcgaacgtctggggacgccacagcaaattgccatcgcacgcgagggcgacctc
ctgacccgagagcgtctgtgctgcggcctctccatgttcgaggtcatcctggcgcgcatc
cgcggcttcctggacgaccccatatggcgcggcccgttacctagcaacggcgtgatgcat
gtggacgagtgtgtggagttccaccggctgtggagcgccatgcagttcgtgtactgtatc
cctgtcggagcgcacgagttcaccgtggagcagtgtttcggcgacgggctgaactgggcc
ggctgtatgatcatcaccctgctgggccaacagagacgcttcgacatcatggacttcagt
taccacctgcttaaagtgcagaagcacgacggcaaggacgagatcataaagagcgtgccc
ttaaagaaaatggtggaccgcattcgcaagtaccagattctgaacgatgagatcttcgcc
atcctgaacaagtacctgaaatccggtgacggcgagaacatgcctgtggaacacgtgcga
tgcttccagccgcccatccaccaatcgctggctagcaactga
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