Clarias gariepinus (North African catfish): 128526300
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Entry
128526300 CDS
T10780
Name
(RefSeq) homeobox protein TGIF2
KO
K19553
homeobox protein TGIF2
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128526300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128526300
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
128526300
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
EspB_PE
Motif
Other DBs
NCBI-GeneID:
128526300
NCBI-ProteinID:
XP_053353991
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All DBs
Position
6:18638397..18647710
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AA seq
401 aa
AA seq
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MKSVKRVLEEEHSGETEFSAMSDSDPCEDDAYPLNLSTGARGGSAKRRRRGNLPKESVQI
LRSWLYEHRFNAYPSEQEKLSLSGQTNLSISQICNWFINARRRLLPDLLRKDGKDPTQFT
ISRRASKSDSRSVGSASPDHSTPPPVPTSRPSVIRPAPTLDLSMLGNTATAILTGAGCLV
GSGLTGRDGSVQTLVQVESRGVIKKDSVTGPPHLTTIPGSSSSSPGLGTMSPTVVLFNTP
PPTPPELCPHDFSDLKLLVDAALQRAAEQENQRQKEQPSARVPCSVPASVSATEALSRNT
EQEKSRESLSSSSKADSAPSPQEQKAILPVSVPVLNASASSLPASEAGVSLPVVPHRVAG
AVNFQPNGVWSVVRPASPPPTSVKHTWSSQHTLHAVREAVN
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctgtcaaaagagtgttggaagaggagcacagtggagagacagagttttctgcc
atgtcagacagtgatccctgtgaggatgatgcttacccgctcaatctttccaccggtgcc
cgtggaggttcagctaagcgccgccgtcgggggaacctgccaaaagagtctgttcagatt
ctgaggagctggctatatgagcatcgttttaacgcctatccctctgagcaggagaagttg
agtttatcaggacagactaatctctccatctcgcagatctgtaactggttcatcaacgcc
cggcgacggctgctccctgacctgctcaggaaggacggaaaggacccgactcagtttacg
atctctcgccgagccagcaaatcagacagtcggtcagttggctctgcctccccagaccac
tccacccctccaccggtccccacatcccgcccttctgttatccgccctgcccccacattg
gacctgagcatgctggggaatactgcaactgccatcttgactggggctggctgcttggtg
ggatcaggtctaacaggcagagacggttctgtccagaccctcgtgcaggtggagagtcgt
ggcgtgatcaagaaagatagtgtgactggacctcctcatctaactactattccaggctct
tcttccagcagcccaggtctgggaacaatgagtcctactgtggtgctgttcaacacgcca
ccccctacaccccccgagctttgtccacatgacttcagcgacctcaaactgctcgtagac
gcggccctacagagagcagcagagcaggaaaaccagagacagaaggagcagccttcagcc
agagtgccctgttctgttcctgcatctgtttccgcaacagaagctttaagtaggaacacc
gagcaggaaaagagtcgtgaaagcctgagttccagcagcaaagctgactccgctccaagc
ccacaggagcagaaggccattctccctgtctctgtgccggtgttgaacgcctctgcttct
tctcttcctgcaagtgaggcgggtgttagtctgccagtggtcccacatagagttgctgga
gcagttaattttcagccaaatggtgtgtggagtgtggtcagaccagctagcccaccccca
accagtgtcaaacacacctggagctcacagcacacactccacgctgtcagagaagcagtc
aactga
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