Clarias gariepinus (North African catfish): 128526349
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Entry
128526349 CDS
T10780
Symbol
myripa
Name
(RefSeq) rab effector MyRIP isoform X1
KO
K22237
Rab effector MyRIP
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128526349 (myripa)
Membrane trafficking [BR:
cgar04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
128526349 (myripa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rab_eff_C
FYVE_2
Motif
Other DBs
NCBI-GeneID:
128526349
NCBI-ProteinID:
XP_053354109
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All DBs
Position
1:complement(38878708..38908443)
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AA seq
1155 aa
AA seq
DB search
MGRKLDMSNLTEEEAEHVLEVVQRDMQLRKTEEERLSELKQELDQEESRCVLLSRQSGFN
ERCCIRCCSSFTFFLKPRRRCLDCRYNVCKRCCSYSETDKTWLCSACEKSRLLKTQSLEW
FYSNVRRRFKRFGSAKVLKMLYRRHVGDQGSQAEFTDGSVYAESTDDSVYESDTTFYKHT
EECSMAESISVALRVAKEAIDEAITKAEKQTGNQEKLKKACYLRENRGELIEELTTMIVQ
TIICKKRDLSEMPTECNLEPSPDQNRNTSQSAFSLLTDEILSQHDKAEQSPVLCTQGLKK
DDVPAIASWNQNMDWLENSCASSVLQSPDGNWFALQSTQQARLSLPTKHENLMFSALEKE
SGLISAYDGMASETESDSDGAWGAAPVEISRRLSSSKLLKDHHTTSTHSAIKLPTKNTAD
QPQNESDQNNPVPQIHKSSLPLLKRKVCLEGRHLSCQSHNAMGITTNRYGVESSEEDLED
NRVKRTRRRRRNKREATEGKGLSICSGKRLSLSEPQDYGRMLLNYLLKSQSKTQSVSGFL
SDETMTPDTPGSMTPDILKSGDMTPDVFRPDAEDPNTDHHVLSGALDQQLIFKLGRLASQ
SNEAQCHLTSSENGEVKEPVDERHEKGDKGVKDSETKENKDQNGGLPNVNDNEEKNKKLW
NSETLSTNLIDNLHNEFLQETVENQSALEMERIATMTQKVCFDCEAEIKREPKECSKLEL
TSSNNICADVNTTEDKTSDRSERMYVDQNVKQGKKDRSDRPAGVDTEPDLVKNQHSVKNE
GHRRGASDKVGNQECREQKKDAGSGDESQKGSMENAVNEYRKQKEKEGLTYSQENLDFCE
EGNLGCNKMIENVVKGLNITEDKTEAHRSHTVYGRSNFITDESIMEKEEMGNQKEQTQTT
QNNPMGFNSKEMNRDEPTQESEMENEGRGNLLGKTQELSCVTQAGQSNDYIFTDVLECPP
SGQDEFPSPEEIYKALCLEKDLQFTYTLLQQKYSAASLRSITTEVLKVLNATEDLIQGSM
GLSQPESLDRPALPPTQRKKLDEHLSKLEENVYVAASAVFGLEAELGDLEECARSISGET
TDEELSHLEEQVASAAAQVQQSELKVSDIAARIAALKNAGLNVAPQTRFAKPQTIDTSRQ
HRRRLPAPPVQGKKT
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcaagttggacatgtcaaatctgacagaggaggaggcagagcatgtgctggag
gtggtgcagagagacatgcagctacgtaagacagaagaggagcgtcttagtgagttgaaa
caggagctggaccaggaggagagtcgttgtgttctgctgtcacgtcagagtggctttaat
gagcgctgctgcatccgctgttgctcatccttcaccttctttttgaagccacgccgccgc
tgcttggactgtcgctacaacgtctgcaagcgctgctgttcgtattctgaaactgacaaa
acctggctgtgctccgcctgtgagaagagcagactgctgaaaacacaatctctagagtgg
ttctacagtaatgtgaggagacgatttaagaggtttggaagtgccaaagtgctgaagatg
ctctataggcggcatgtaggagaccaggggagccaggccgaatttacagacggaagtgta
tatgctgaaagcactgacgacagtgtttatgaaagtgacactacattctacaagcacact
gaagagtgcagcatggcggagagcattagtgtggcacttagggtggcaaaagaagccata
gatgaggctattactaaggcagaaaaacaaacaggcaatcaggagaagctgaagaaggct
tgttacctacgagagaacagaggagagctgatagaagagctcaccaccatgattgtccag
acaattatctgcaagaagagagatctgtctgagatgcctacagagtgtaatctggagcca
tcacctgatcaaaatagaaatacatcccaatcagccttctcacttctcactgatgaaata
ctgtcccagcatgacaaagctgagcagagtccggtgctttgcacacaggggctgaagaaa
gatgatgtccctgccattgctagctggaatcagaatatggactggttggaaaactcctgt
gcatcctcagtgctacagagtccggatgggaactggtttgctctccagagtacccaacag
gctcggctgagcctgccgaccaaacacgagaacctaatgtttagtgccctagagaaggaa
tctggtttgatctcagcatatgatggaatggcctctgagactgagtcagactctgacgga
gcctggggtgctgccccggtggagatttctcgcagactgtcctccagcaagctgctaaaa
gaccatcacaccaccagcacacattcagccataaaattacccacaaagaatactgctgac
caacctcaaaatgaaagtgaccagaacaaccctgtgcctcaaatccataaatcatcactt
cctctcctgaagagaaaggtttgtttagagggcaggcacttgtcttgtcaaagtcataat
gcaatgggtattacaacaaaccgttatggtgtagaaagtagtgaggaagacttagaggac
aacagggtaaagagaacacgacggaggagaagaaataagcgcgaggccacagagggaaaa
ggcttgagcatatgcagtgggaaaaggctatctttatctgaacctcaggactatggcagg
atgctactgaattatctgttgaaatcccagagcaagactcagagtgtatcaggatttctt
agtgatgagactatgactccagacacaccaggctctatgaccccagacattttgaaatct
ggggacatgactcctgatgttttcagacctgatgcagaagaccccaacactgaccatcat
gtcctgagtggtgctttggatcagcagctaatattcaaactgggaaggctggccagtcaa
tcaaatgaagcacagtgccatttaaccagcagtgaaaatggtgaagtaaaagagcctgta
gatgagagacatgaaaagggagacaagggggtgaaagactcagaaacaaaagagaataaa
gatcaaaatggaggcttaccaaatgtcaacgataatgaggaaaagaacaagaaattgtgg
aattcagaaaccctgagcacaaatttgattgataatttgcacaatgaatttttacaagag
acagtagagaaccaaagtgcattggaaatggagagaattgccacaatgacacagaaagtg
tgctttgattgtgaggctgagataaaaagagaacccaaagagtgcagtaagctagaatta
actagctctaataacatttgtgcagatgttaatactactgaagacaaaacaagtgatagg
agcgagagaatgtatgtggatcagaatgttaaacagggaaagaaagacagatcagaccgt
ccagcaggagttgatactgagcctgaccttgtcaaaaatcaacacagtgtaaagaatgaa
ggtcatagaagaggggcaagtgataaggttgggaatcaagagtgcagggagcaaaaaaaa
gatgctggatctggagatgaaagtcaaaaaggcagcatggaaaatgcagtaaatgaatac
agaaagcagaaggaaaaagagggactaacatatagtcaggaaaatctggatttttgtgag
gaaggcaacctaggatgtaataaaatgattgagaatgtagttaagggtttaaatattaca
gaagacaaaacagaggcacatagaagccatacagtatacggcagatcaaatttcatcaca
gatgaatcaattatggagaaggaggaaatgggaaaccaaaaagaacaaactcaaacaaca
cagaataatccaatggggttcaacagcaaagaaatgaacagggatgaaccaacacaagag
agtgaaatggaaaatgagggcaggggtaacttgctagggaaaacacaagagcttagctgt
gttactcaggcaggacagagtaatgactacatattcacggatgttctggaatgccctcct
tctggtcaggatgagtttccctccccagaggaaatctacaaagctctgtgcttagaaaaa
gacctgcagtttacctacactctgctacagcagaagtattcggctgcgtctctgcgcagt
attaccactgaggtgctaaaggttctcaatgcgactgaagatctcatccagggttccatg
ggtctcagccagcctgagtccttggatcgacctgcccttcctcccactcagagaaagaaa
ctagatgagcatctcagcaaactagaggaaaatgtatatgtggctgctagtgctgtattt
gggctggaagctgaactgggagatcttgaggagtgtgcacgcagtatcagtggagaaacc
acagacgaagagctctctcatttggaagaacaagtggcctcggctgctgctcaagtacag
cagtctgagcttaaggtatcagacattgcagcgagaattgcagctctgaaaaatgctggc
cttaatgtagcaccacagacacgttttgccaagccacaaaccatagatacatctcgccag
caccgccgccgcctgccagcacctccagtgcaaggtaaaaagacgtag
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