Clarias gariepinus (North African catfish): 128526372
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Entry
128526372 CDS
T10780
Symbol
kalrnb
Name
(RefSeq) kalirin RhoGEF kinase b isoform X1
KO
K15048
kalirin [EC:
2.7.11.1
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cgar01001
]
128526372 (kalrnb)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128526372 (kalrnb)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128526372 (kalrnb)
Enzymes [BR:
cgar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
128526372 (kalrnb)
Protein kinases [BR:
cgar01001
]
Serine/threonine kinases: CAMK group
Trio family [OT]
128526372 (kalrnb)
Membrane trafficking [BR:
cgar04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
128526372 (kalrnb)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128526372 (kalrnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
Spectrin_6
SOS1_NGEF_PH
Spectrin
SH3_KALRN
SH3-RhoG_link
PH
SH3_2
SH3_1
CRAL_TRIO_2
IQ_SEC7_PH
PH_10
PH_19
SH3_9
Spectrin_SESTD1
CRAL_TRIO
RHG20_PH
DUF7799
DUF3300
YkyA
Motif
Other DBs
NCBI-GeneID:
128526372
NCBI-ProteinID:
XP_053354141
LinkDB
All DBs
Position
6:35877764..35958830
Genome browser
AA seq
2313 aa
AA seq
DB search
MNSAEAAEEGPNEPDTEPFFKTVPPLSAGSLRNDGVKAADVLTVLREKVAFVSGGRDKRG
GPILTFPARSNHDRIKQEDLRRLVTYLSTVPSEDVSKRGFTVIIDMRGSKWDLIKPLLKT
LQEAFPAEICVALIIKPDNFWQKQKTNFGSAKFTFETSMVSVEGLTKLVDPSQLTGDLDG
TLEYDHVEWTELRVSLEEFTCGALHLLSHLEELQETLSRQEMAADAEEARRLLEEHARLR
KSATKAPVDELEQEGQRLLQKIRDGGDGRLSGGPDFQSLVPRVSALLDKLLAARQHLLQA
WHKRKQQLDQCFQLRLYEQDAEKMFEWIGHNKELFLQTHTEIGVSYQHATDLQTQHDHFA
MNSMNAYVNITRIASVATRLCEAGHYAADQIQQVSVQLDQDWKSFASSLEERSAILAMSS
VFHQKAEQFLSGVEGWAKACSEGGLSAAMQELELAIHGHQNLYEQVTTAYTEVSQKGKTL
LDVLQRPQPQADSGSVTTGADYSQAVRAVLDVMHEVVHEHRRLDGLLQHRKLRLHQRLQL
CVFQQDVQQVLDWIQNHGEAFLSKHTGVGKSVHRARALQKRHDDFQEVAQNTYTNADKLL
EAAEQLAQTGECDPEEIYAAAHHLEVRVQEFVRRVEQRKLLLDLSVSFHTHTKELWSWME
ELQKGLVEPVCSESVDSVQELIRQFQQQQSSTLDATLNVIKEGEELIQHLRDSALASNRL
PHASSVAHIESVLQQLDEAQAHMEELFHERRIKLDIFLQLRIFEQYALEVTGELDAWKQD
LLRQATDFNTEELTLAEQRLHRHTERKLAMNNMTYEVIQQGQDLHQYIMEVQASGMELSG
EKDVDLAAQVQELLEFLHEKQHELELSAEHTHTRLEQCLQLRHLQAEVKQVLGWIRNGES
MLTASTVNAGSLSEAEQLQREHEQFQLAIESLLHADSLQRTHQSALQLQQRAEMMLQAGH
YDPDAVRACAETVALHWQTLMLKMEDRLKLVNASVAFYKTSEQVCNVLESLEQEYRREED
WCGAHDKFGSTSDTDHVAPLISKHLEQKEAFLKACTLARRNAEVFLKYIHRNNVSMSGVT
SHNRAPETQVKAILSELLQRENRVLHFWTQKKKRLDQCQQYVLFERHVRQALDWLQETGE
QYLLTHTSPGETTEKTQGLLKEYEEFRVSAKQTQEKVKLLIQLAGSLVEKGHVHVAELKR
WVSTVDRRYRDFSQRMGQYRSSLDRALGLCSEDYKDLELDIIPASLTHTDPEVNLNDPNQ
EVNEEKKKSARKKEYIMAELLQTERAYVRDLQECLETFLWEMTSGMDEIPQGIANKEHVI
FGNIQEIYDFHNNIFLKELENYEQLPEDVGHCFVTWADKFHMYVTYCKNKPDSSQLIQGQ
AGRFFDEIQKRHGLANSISSYLIKPVQRITKYQLLLKELLTCCEEGKGEIKEGLEVMLSV
PKRANDAMHVSMLEGFDENLAVQGELILQDTFQVWDPKSLIRKGRDRHLFLFEISLVFSK
EMKDSSGRTKYVYKSKLQTSELGVTEHIEGDPCKFALWAGRTPTSDSKTILKASSMEVKQ
EWIRNIREVIQERTVHLKGALKEPIHLPKTPSRQRSISKRETTEDADSQGDASSQPDTIS
IASRTSQNTVDSDKLSGGCEHTVVLQDFVACSACELSVHSGQTVEVLERSSDRPGWCLVR
ITERSPPQEGLVPSSTLSVSHSRSSVDMDCFLPSGKENYPVGSSEVKSESVTSLQPQTSV
TSLPSSSPGPKRSGTTGNTLKKWLTSPVRRLSHGKGDNANAKKPNNKQRKRDGRKSVDLG
AQQEDSAEERGRRGANSGGEDEAEDEPHTPLPPPMEIIKDPSAQEEKSPEPGSFGSDQTP
RDPETEKKNKALRGRMFVLNEMVQTEKDYVKDLGTVVEGFMKRIAEKGVSEDMAGKDKIV
FGNIHQIYDWHKEFFMGELEKCLQDHDKLAELFIKHERRLHMYVIYCQNKPRSEFIVAEY
DTFFEEVQQEISSRMSISDYLIKPIQRITKYQLLLKDFLKYSSKAGLDCQEIEKAVDLMF
LVPKRCNDMMNLGRLQGYEGKLTAQGKLLQQDTFFVTEQDTGVLSRSKERRVFLFEQIVI
FSELLRKGSSTPGYQFKKSIKVSFLSMEQHVEGDPCKFVLACRGSSERLTLQAANIDIKQ
EWVQSIRELLDMQSNFLTALQNPQEYQKKESGSSHSLNRQASGSSRSSSSHPSTPLKPTS
SSSNSSPGHKQQGKQQEEEEEDPDEAECNGLSSVKVTQDYNAVKEDEICVVVGEKVQILA
TNQQNMCLVYRPANSQSPAAEGWVPGHVLSSTR
NT seq
6942 nt
NT seq
+upstream
nt +downstream
nt
atgaattctgccgaggctgctgaggaaggaccgaatgagccggatacagagccgtttttc
aagacagttccgccactttcagccggctctctgaggaacgacggtgtgaaagctgcagat
gttctgacggttctgagggaaaaggtcgcctttgtctcaggaggcagagataagagagga
ggacccatcctgaccttccctgcccgcagcaaccacgaccgaataaagcaagaggacctg
cgcagactcgtcacctacctctccaccgtgcccagtgaggatgttagcaagcgcggcttt
acagtaatcattgatatgcgtggctctaagtgggacctgattaagccgctgctaaagaca
ttgcaggaagcgttcccggctgagatctgcgtggccctaattatcaaaccagacaacttc
tggcagaagcaaaagaccaacttcggcagtgctaaattcacattcgagacaagcatggtg
tccgtggagggcttgaccaaactggtggacccatcccagctgacaggcgatctggacggc
acgctggagtacgaccatgtcgagtggacggagctacgtgtctcgctagaggagttcacg
tgtggagcgctgcaccttctctcgcatttggaggagcttcaggagacactttcacgccag
gagatggctgcggacgcagaggaggcacgcaggctcctagaggagcatgcacgcctgaga
aagagtgctaccaaggcacccgtggacgaactggagcaggagggacaacgtctcctccaa
aaaatcagggacggcggggacggacgattgtccgggggacctgattttcagagccttgtt
cctagagtctccgccctgctggacaaactgctagctgcacgccagcacctgttacaggcc
tggcacaaacgaaaacagcagttggaccagtgtttccaactccgattgtacgagcaggat
gctgaaaagatgtttgagtggattggccacaacaaggagctgttcttgcagacgcacaca
gagatcggggtgagctaccagcacgccaccgaccttcagacccagcatgaccacttcgcc
atgaattccatgaacgcctacgtgaacatcacgcggattgcctcggtggccacgcggctg
tgtgaggccggccactacgccgccgatcagatccagcaggtctcagtgcagctggatcag
gactggaagagcttcgcctcgtccctggaggagcgcagcgccattctcgccatgtcctct
gttttccaccagaaagctgagcagtttctctccggagtggagggttgggcaaaggcgtgc
agcgagggaggattgtccgcggcgatgcaggagctggagttggccatccacggccatcag
aatctgtacgagcaggtgaccacagcgtacaccgaggtgagtcagaaagggaagaccctg
ctggacgtcctgcagaggccccagcctcaggccgactccggctcggtgacgactggcgca
gactacagccaggcggtgcgcgccgttctggacgtcatgcatgaggtggtgcacgagcac
cgcaggctggacggtctgcttcagcaccgcaaactgcgcctgcaccagcgactgcagctg
tgtgtgttccagcaagatgtgcagcaggtcctggactggatccagaaccatggagaggca
tttctcagtaaacacaccggcgtggggaagtctgtacatcgtgcacgagcgctacagaaa
cgacacgacgacttccaggaagttgcacagaacacgtacaccaacgctgataagctctta
gaagcggccgagcagttagcacagacgggggagtgcgaccctgaagagatctacgccgcc
gcccatcacctggaggtcagggttcaggagtttgtgcgcagagtggagcaaaggaaactc
ctcctggatctctcggtgtccttccacacacacaccaaagagttgtggtcatggatggag
gagctgcagaaaggcctggtcgaacccgtgtgctcggagtcggtggactcggtgcaggag
ctcatcaggcagtttcagcagcagcaaagcagcacgctggacgctacgctcaacgtcatc
aaggaaggggaagagctcatccagcacctacgggactcggctctggcgagtaacaggctg
ccccacgccagctcggtggctcacatagagagcgtgctgcagcagctggacgaggcgcag
gctcacatggaggaactcttccacgagcgcaggatcaaactcgatatcttcctgcagctg
cgcatcttcgagcagtacgccttggaggtcacgggcgagctggacgcatggaagcaggac
ctcctgcggcaggcgacggattttaacacggaggagctcacgctggccgagcagaggctc
caccgtcacaccgagcgcaaactcgccatgaacaacatgacctatgaggtcatccagcag
ggacaggacctgcaccagtacatcatggaggtacaggcgtcaggtatggagctgagtgga
gagaaggatgtagatctggcagctcaggtccaggagctgttggagtttctgcatgagaaa
caacacgagttggagctgagtgcagaacacacacacacgcgtctcgagcagtgtttacag
cttcgccacctacaggctgaagtcaaacaggttctcggctggatccgaaacggcgagtcc
atgctcacggcgagtacggtgaacgccgggtctctgtccgaagcagagcagctgcagaga
gagcacgagcagttccagctcgccatcgagtctctcctccatgcagattcgctgcagcgg
acacatcagagcgctctgcagctccagcagagagctgagatgatgctgcaggccggccac
tacgacccggacgctgtccgagcctgcgccgagacggtagcgctccactggcagaccctt
atgctgaaaatggaggatagactcaagctggtcaacgcctcagtggccttctataagacc
tccgagcaggtgtgtaacgtgctggagagtctggagcaggagtacaggagggaggaggac
tggtgtggagcgcacgacaaattcggctcgacgtcagacactgatcacgtggctcctctc
atcagcaagcacctagaacaaaaagaagcctttctcaaggcctgcactctagctcgccgg
aatgctgaggtctttctgaagtacatccatcgcaataacgtgagcatgtcaggggtcacc
agtcacaaccgagcacccgagacacaggtcaaagcaattctgagcgagctgctccagaga
gagaatcgtgtcctgcatttctggacgcagaagaagaaacgcttggaccagtgtcagcaa
tatgtgctgtttgaacgccacgtcaggcaggcactggactggttgcaggagactggtgag
cagtatttgttgacacacacatctccaggtgaaaccacagagaaaactcagggacttctc
aaggaatatgaggaatttcgtgtctctgcgaagcaaacccaggagaaggtgaagttgttg
atccagctagctggcagcctggtggagaagggacacgtccatgtggctgagctgaagcgg
tgggtgtccactgtggacagacgctaccgggacttctctcaacgcatgggccagtaccgc
tctagtctggaccgagcactggggttatgttctgaggactataaagacctggaactggac
atcatccccgccagcctgacccacaccgacccagaggtcaacctcaacgaccctaaccaa
gaagtcaacgaagagaagaaaaaatcagccaggaagaaagagtacattatggcagagctg
ctgcagactgagagagcatacgtcagagatctgcaggagtgtctcgagacattcttgtgg
gagatgacgagtggcatggacgagatcccacagggaatcgccaacaaggagcatgtcatc
ttcgggaacattcaggagatttacgatttccataacaacatttttctgaaagagctggag
aactatgagcagctcccggaggatgttgggcattgtttcgttacttgggctgataagttc
cacatgtacgtcacctactgcaaaaacaagccagactccagccagctgattcagggtcaa
gctggacgcttcttcgatgagatccaaaaaagacatggtctggccaactccatctcctcc
tacctcatcaaacctgtgcagagaatcaccaagtaccagctcctgcttaaggagttgttg
acttgctgtgaagagggtaagggggagattaaggaaggcctggaggtgatgttgagtgtg
cctaaacgagccaacgatgctatgcacgtgagcatgctggagggttttgatgagaacctg
gctgttcagggtgagctcatactgcaggacacgttccaggtctgggaccccaaatctttg
atccgtaaaggcagagatcgtcaccttttcctcttcgaaatctctctggtgttcagcaaa
gagatgaaggactcatccggacgcacgaaatacgtctataagagcaaattgcaaacttca
gagttgggagtgacggagcacattgagggagacccgtgtaaatttgcgctgtgggccgga
cgcaccccgacatcagacagcaaaaccatcctgaaggcgtccagcatggaggtgaagcaa
gagtggattcggaatatcagagaggtgatccaagagaggacagtgcacctgaagggggcg
ctaaaggagcccattcacctccccaaaactccatccagacagcgcagcattagcaagagg
gaaaccactgaagacgcagacagtcagggtgatgccagcagccagccggacacaatctcc
attgcatcccgcacctcccaaaacacagtggacagtgacaagctctcaggcggctgtgaa
cacacggtggtgctgcaggacttcgttgcgtgttcggcgtgtgagctgagtgtgcactca
ggacagacggtggaggtgttggagcgctcgagcgatcgacctggctggtgtttggtgcgc
atcacagagcgctcgccccctcaggagggactcgtacccagcagcacgctgtcggtctcg
cactcgcgcagcagcgtcgacatggattgctttctcccctccggcaaagagaattaccca
gtgggcagttcagaggtgaagtcggagtcggtgacatcactgcagcctcagacatctgtg
acctcattgccgagcagctcaccaggacccaagcgctcgggaacgactggaaacacgtta
aagaagtggcttaccagccctgtgcgacggctcagccacggcaagggagacaacgccaac
gccaagaaacccaacaacaaacagcgaaaacgtgacggtcgcaagagcgtggacctcgga
gctcagcaggaggacagtgccgaggagagaggaaggagaggagcaaacagcggaggagag
gacgaagccgaagacgagccacacacacctctacctcccccgatggagatcattaaagat
ccctcagcgcaggaggagaagagtccagagcctggatcctttgggtccgatcaaacaccc
cgagacccagaaacagagaagaagaacaaagctctgagaggacgcatgtttgtattgaat
gaaatggtgcagacagagaaggactatgtcaaggacttgggtacggtagtagagggtttc
atgaagaggattgccgaaaagggagtttccgaggacatggcggggaaagataagattgtt
ttcggaaatattcatcaaatctacgactggcacaaagagtttttcatgggagaactggag
aaatgcctgcaagatcacgacaaactggctgagcttttcatcaaacatgagaggcgactg
catatgtatgtgatctactgtcagaacaaaccccgctctgagttcatagtggctgaatat
gacacgttctttgaggaagtccagcaggagatcagctccaggatgtctatcagtgattat
ctgatcaaacccatacagcgaattaccaaatatcagctattgctcaaggacttcttgaaa
tacagctctaaagcaggtttggactgtcaggaaatagagaaagcagttgacctgatgttc
ctggtgcccaaacgttgcaatgatatgatgaacttggggaggttgcagggctatgaggga
aaactgacagctcagggcaagctgctgcagcaggacacgttcttcgtgacggagcaagac
acgggcgttctctctcgcagtaaagagcgcagagtcttcctctttgagcaaatcgtcatc
ttcagcgagcttcttcgcaaaggatcctcgacgcccggataccagtttaagaagagcatc
aaggtgagcttcctgagcatggaacagcacgtagagggagacccgtgtaagttcgtgcta
gcgtgccgcggctcatccgagaggctaacgctacaggctgcgaatatagacattaagcag
gagtgggtacagagcatacgggaacttctggacatgcagagcaacttccttacagcgctc
cagaacccacaggagtaccagaagaaggaatccggatcctctcactccctgaaccgccaa
gcgtccggcagcagccgatcctcttcctctcatccctcaactccacttaaaccaacttcc
tcttcgtccaacagcagccccggtcacaagcagcagggcaagcagcaggaggaggaggag
gaggacccggacgaagcggagtgtaacggcttgtcgtcggtaaaggtgacgcaggactac
aacgccgtgaaggaggacgagatctgcgtggtggtgggcgagaaagtgcaaatcctggcc
accaatcagcagaacatgtgtctggtgtatcgaccagccaacagccaatcacccgctgcc
gagggctgggtgccgggacacgtgctgtcctcgacccggtaa
DBGET
integrated database retrieval system
