Clarias gariepinus (North African catfish): 128526476
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Entry
128526476 CDS
T10780
Symbol
sema3fa
Name
(RefSeq) sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa
KO
K06840
semaphorin 3
Organism
cgar Clarias gariepinus (North African catfish)
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Gene cluster
GFIT
Motif
Pfam:
Sema
ig
Ig_3
I-set
Ig_2
Ig_6
V-set
PSI
zf_CCCH_5
C2-set
Motif
Other DBs
NCBI-GeneID:
128526476
NCBI-ProteinID:
XP_053354335
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Position
6:complement(25563152..25610746)
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AA seq
797 aa
AA seq
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MIALSLRDLLLGTLLISVFSAVSVQTNPFASISPLAAPRIYLSFKELKSTGTAHHFAFLL
NSTDYRVLLMDEDHDRMYVGSKDYILSLDLNDINKEPLIIHWPVAPLRKNECVLSGKDVN
GECGNFIRLIEPWNRTHLYVCGTGAYNPICTYVDRGQKSQALLQNQNLRAGGRTSRAAEP
SASPEPYAPKEYIFRLEPGKVDSGKGKCPFDPKLNSVSTLINGQLYAGVYIDFMGTDSAI
FRTLGKHTAMRTDQYNSRWLNDPTFVHAQLIPDSAEKNDDKLYFFFREKASEMGQTPLTQ
SRIGRICLNDDGGHCCLVNKWSTFLKARLICSVTGADGIETHFDELRDVFIQKTQDTKNP
VIYGVFSVSGSVFKGSAICVYSMADVRMVFNGPFAHKEGPNYQWIAYQGKIPYPRPGTCP
GGTFTPNMKSTKDYPDEVINFMRNHPTMYNAVYPVHKRPLVVRTNVDYEFTTITVDQVAA
ADGSYEVLFLGTDRGTVQKVIVLPRDDLQTEELVLEEVEVFRVPTPITTMKISPKRQQLY
VSSAVGMTHLALHRCDVYGEGCADCCLARDPYCAWDGKSCSRYSTNHKRRSRRQDVKYGN
PIRQCRGYNSNANRNTLETLQYGVEGSTAFLECQARSPHVSIKWHFQKENSDRRREIRSD
GRVVHTDQGLLVRSLQLSDAGTYQCTATEKNFKHTLVKLQLLVLSVRTVNNIQMETGASI
PAMPAVPLQTSAWTPSAEQYKDLLTILSQPEMGLINQYCQDYWQFAEHDKKDPYEAKEQR
KPRNRRHHETQRSSAET
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgattgcgctgagcttgagggatttgttactggggactcttctgatttctgtgttctca
gcagtatcagtccagactaacccatttgcctccatatcacctctggctgctccccggatc
tacctgtcctttaaagagctgaagtctactggcacggcacaccacttcgctttcttgctc
aactccacagactacagggtcctgcttatggacgaggatcatgaccgcatgtatgtgggc
agcaaggactacatcctttccctagacctaaatgacatcaacaaagagccccttataata
cactggcctgtggctcctctgagaaagaatgagtgtgttctgtcagggaaggatgtcaac
ggcgagtgcgggaacttcatccggttgattgaaccatggaaccggactcacctgtatgtg
tgtggaacaggtgcctacaaccccatttgtacctacgtggacaggggtcaaaaatcacag
gctttgctccagaatcagaatcttcgtgcaggaggccgaacaagtcgtgcagcagagccc
agcgcctcacctgagccttatgcacccaaggaatacatctttcgcctagagcctggtaaa
gtggattctgggaaaggaaaatgtccattcgatcccaaattaaacagtgtgtctacgcta
atcaatggtcagctctacgctggagtgtacatcgattttatgggaacggactctgctatt
ttccgtacactagggaaacacacggccatgaggactgaccagtacaactctcgctggctc
aatgatcccacattcgtccatgcgcagctcataccagatagtgcagagaaaaatgacgac
aagctatacttcttctttcgagagaaggcctcggaaatgggtcagaccccattgactcaa
tccagaattggcaggatctgtttgaatgatgatggaggtcactgctgtttggttaacaaa
tggagcaccttcctgaaggctcggctaatctgctccgtaaccggggctgatggcattgag
acccattttgacgaactccgggatgtgtttattcagaagactcaagacaccaagaatcct
gtcatctatggagtcttctcagtgtctgggtcagtgtttaaggggtcagccatatgtgta
tattccatggccgacgtgcgtatggtctttaacggccccttcgcccacaaggaaggtcca
aactaccagtggatagcctaccaggggaaaatcccttacccacgacctgggacatgtcca
ggagggacgttcacccctaacatgaaatccactaaagattaccccgatgaggttatcaac
ttcatgcggaaccaccccaccatgtacaatgctgtgtatccagtgcacaagcgccccctg
gtggtccgtaccaacgttgattacgagttcaccacaatcactgtggaccaagttgcagca
gcagatgggagttatgaggtgcttttcttgggaacagacagaggcaccgtgcagaaagtc
attgttcttcctcgagatgacctacagactgaggaactagttctggaggaagtggaggtc
tttagggttccaacaccaataacaacgatgaagatttctccaaaacgacaacaactgtat
gtgagttcagcagtgggaatgactcatctggcattacacagatgtgacgtgtatggagag
gggtgtgcagactgctgcctcgctcgagacccttactgcgcttgggatggcaagtcctgc
tcccgttactccactaaccacaagaggcgcagtcgaaggcaagatgtgaagtacggcaac
ccgatccgacagtgcagaggctacaactccaatgctaatagaaacactctagagacacta
cagtacggagtggagggaagcacagcatttctggagtgccaggccaggtctcctcatgtg
tccatcaaatggcattttcagaaggagaacagtgacagaagacgagagatccgttcagat
gggcgcgtggtgcacacagatcagggcctgcttgtgcgctccctgcagctctcagacgcc
ggcacctaccagtgcactgccacagagaagaactttaaacacacactggtgaagctgcag
ttgcttgtgctgtcagtgcgcacggtcaacaacatccaaatggagaccggagcctctata
cctgccatgcctgctgtccccctacagaccagtgcctggacaccgagtgctgagcagtac
aaagacctgctaaccattctgagccaacctgagatgggcttaatcaaccagtactgccag
gactactggcaattcgctgagcatgacaagaaagacccgtatgaggcgaaggagcagcgc
aaaccgcgtaaccggagacaccacgagacccagaggagctcagctgagacatga
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