Clarias gariepinus (North African catfish): 128526570
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Entry
128526570 CDS
T10780
Symbol
nhej1
Name
(RefSeq) non-homologous end-joining factor 1
KO
K10980
non-homologous end-joining factor 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
128526570 (nhej1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgar03400
]
128526570 (nhej1)
DNA repair and recombination proteins [BR:
cgar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
128526570 (nhej1)
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Gene cluster
GFIT
Motif
Pfam:
XLF
XLF_CC
Motif
Other DBs
NCBI-GeneID:
128526570
NCBI-ProteinID:
XP_053354536
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Position
6:complement(29001098..29024596)
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AA seq
320 aa
AA seq
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MQTTVYAEGALLAVPWVPVNVGGSKLLAKAWFGDTEYQLMLSDLNGVWEEVMGINNIERR
AQVLNKRLRAPVHTFFAHLRSVAMPCLSGQSYEQSIAVRFLLKHQEGHLIVRLKSELGDV
PFYWEFHCTPASIAVVSRELVCPLLSMTQVLQRHVGELTALLLKKDAEIQDYKENGAILS
RGRLQTEPFKEEQYRKNFSQRLPNMLQDSLDFHSDLQELYVSICAAKNARKRKHSSEYSF
ASVDSFDPDQDQTSYVATGMKPVSPGCNQNYASHQVEDTQCADSNETVRHLPAAAVPPVF
IPADRSVIHSKKKKAVGLFQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgcagactaccgtctatgctgaaggagctttgttggctgtgccatgggtgcctgtgaat
gtcggaggttccaaattgttggccaaagcctggtttggtgacacagaatatcagttgatg
ctgagtgacctaaacggcgtttgggaggaagtgatgggcataaacaacattgagagacgt
gcacaggttctaaataagcgtctaagggctccagtgcacacattttttgctcatctgcgc
tcggtggccatgccatgtctgtcaggtcagtcatatgaacagagcattgcggtgcgtttt
cttctcaagcatcaggagggccacctaattgtcagactcaagagtgagctgggggatgta
ccgttctattgggaattccactgcactcctgcctcgatagcggtggtctccagagagcta
gtgtgtcccttgttgtctatgacccaagtgctacagaggcatgttggagaactaactgct
ttgttgctcaagaaagatgctgagatacaagattacaaagagaatggagccatacttagc
agaggtaggcttcaaactgagccatttaaggaggagcaatacagaaagaacttcagtcag
agactacctaacatgctacaggacagtctggactttcactctgatcttcaggagctgtat
gtatccatatgtgctgcgaaaaatgcccgaaagcgcaagcattctagtgaatacagcttt
gcttcagtagacagctttgaccctgaccaggaccagactagctatgtggcaacaggtatg
aagccagtctctcctggttgtaaccaaaattatgcaagccatcaagtagaagatacacag
tgtgctgactccaatgagactgtgagacacttacctgctgctgcagttcctcctgtattt
atacctgcagacagatcagttattcactccaagaagaagaaagcagttgggctcttccaa
taa
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integrated database retrieval system
