KEGG   Clarias gariepinus (North African catfish): 128526572
Entry
128526572         CDS       T10780                                 
Symbol
als2b
Name
(RefSeq) alsin isoform X1
  KO
K04575  amyotrophic lateral sclerosis 2 protein
Organism
cgar  Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cgar03036]
    128526572 (als2b)
Chromosome and associated proteins [BR:cgar03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    128526572 (als2b)
SSDB
Motif
Pfam: RCC1 MORN RCC1_2 VPS9 PH RhoGEF SOS1_NGEF_PH
Other DBs
NCBI-GeneID: 128526572
NCBI-ProteinID: XP_053354541
LinkDB
Position
6:36097254..36115979
AA seq 1696 aa
MDKLKSLGEEKRSQERGVLHTWRGYSYSVTPEKLLLSRPVLQAALGAKHGVLLLEGGQVY
SFGELPWKQNLSSLKTTDPILEAGLSEKRVVSVAAGTSHNGAVTEDGAVHMWGDNAHGQC
GLSGLSVVPNPTPVGVMESETAPSRPVRILELACGEQHTLALSVAHEVWSWGFGCQLGLH
TASFPVWKPLKVEHLAGRHVLQVACGASHSLALVRCPSPPHDPRRPPEDKCGQCNQSLYT
MTDKEDHVIISDNHYCPLGVELDEDDNKSALEHGLVQGTPSSRGKMKISPSEPVLTTRTQ
TLRSAFSSTSSPESRDEVQIAGEALVQSSLKNLERAQDPMTNGDVFEAATEPSTHETENT
KTAQGFPGTGPKSSQYPDEQALKDYLKRLSDQTLAEQAAKTPSTAPCAQILPEPAGVFTS
DPPTPVAQSVTPMGSALNNLVVSYASAVGERVASTYEALSLRKVISYWGPGEERVRQEEH
KQGKKSSSLSDIREEEAEGLSRRLSLPGLLSQGTCALHILYHHMLSPRLLRRVNRPRDRA
VALAPAGVAESDARLPSLQTEVWSWGHGQEGQLGHGDVLPRLQPLCIKSLSGKEVVKVAA
GALHSLALTAQSQVYSWGSNSFGQLGHMESPSTIPRPAKLSEGIRVWDVAAGQHHTLLLA
DGDCLQPILYYSGQQVKESSDETAQEESGGYTQQPVLLPFCMNLGYVSSVSAGGQVCAAI
ADRSVVGLIASLHELAAAERKFYCKLTSIKTLLLQPLLNLDSLSSALGPPCTGLLQNLIG
RFSRLSQLTGQNSAAMTCFLRRSRDLRGLVLVDNAHLFLDTYSEFCAAVGNMLVMGGFQA
LVKPCQDVFGKGVETVQKLSECTEDGAMPADVLAHLFYLPVRHLHEYSHLLLKLASCYDP
VHAPQFCADHQKLQEACSKYESLALHLKRKRKEAEYTLHFWKSFPGKMTDSLRKPSRRLV
CESGNKALTLQNAGRFSVNWFILFNDALVHAQFSTHHVFPLATLWVEPMSDENAGLYGLK
LTSPEESFTLLASSPSEKAKWLRAINQAVEQALSGAGLHTAPPTSGAGLRADPPISRTAS
YTFYKDSRVKDAVYEGRWVAGKPHGRGVIKWPDGRMYTGMFKNGLEDGFGDYIVPNKNLN
KNDHYQGQWKDGRMHGFGIFRYATGEVYEGSFQDNMRHGHGMLRSGKLNSTSPSVFIGQW
LNDKKTGYGVFDDITRGEKYMGLWQDDQKQGNGVIVTQFGLYYEGAFRDNKMMGTGVLLS
EDDTTFEGDFSEDWTLNGKGTLTMPNGDYIEGSISGVWGTGLKISGSYYKPNLYDTDKDK
SRALKLGQFSVHPEDKWKAVFGECWSRLGCDTPGQGETRAAWDNIAIALTTNRRQHRDSP
ELLSRSHNKTLESLEFIPQHDGPVTLEKYETIRRYLIKACDTPLHPLGRLVETLVAVYRM
TYVGVGANRRLLQQAVNEIKSYLSRIFQIVRFLFPDLPEEGGLLVEAPNEKKESKSTSSE
LESPKPGRVVSSSALLLPVLLPRLYPPLFTLYALDKEKEDDVYWDCVLRLNKQPDLALLA
FLGVQQKFWPVTVTAHGEKQQVLPGTKDACFASAVETLQQISTTFTPSDKLQVIQLTFEE
ITQEVLALLKQDFLWSMDDLFPVFLYVVLRARIRNLGSEVSLIEDLMDPCVQHGEHGIMF
TTLKACYYQIQHEKIT
NT seq 5091 nt   +upstreamnt  +downstreamnt
atggataagctgaagagtttgggtgaggagaaacgctctcaggagcgaggagttctgcac
acatggagaggttactcctacagcgtcactccagagaaactgctcctttctcggcccgtg
cttcaggctgccctcggggctaaacacggagttctgctgttggagggtgggcaggtgtac
agttttggagaattaccatggaaacagaacctgtcgtctttgaaaacgacagaccccatt
ctggaggcggggctcagcgagaagcgcgtggtttccgtggcagcggggacctcccacaat
ggggcggtgacggaggacggagccgtgcacatgtggggggacaacgcgcacggtcagtgc
ggtctgtcaggactctcggtcgtccccaatcctacgcctgtgggcgtgatggagagtgag
accgcgccctcgagaccggtaaggattttggagttggcgtgcggtgagcagcacacgctg
gcactttcggttgcgcacgaagtgtggtcatggggctttggctgccagttggggttgcac
accgcgtcttttcctgtctggaagccgctgaaggtcgagcacctagccgggaggcatgta
ctccaggtggcgtgtggagcctcacacagtctcgcgcttgtgcgttgcccgtcccctcct
catgacccacgcagacctcccgaggacaaatgcggccagtgcaatcaatcactttacacc
atgaccgacaaggaggatcatgtcatcatctcagacaaccactactgccccctgggggtg
gaactcgatgaagacgacaacaaatctgctttggaacatggcctagttcagggtactcct
agttcgaggggcaagatgaaaatttccccatctgagccggttttaacgacacgcacccag
accctgaggtccgccttttcgtccacgtcgagccctgaatcgcgggatgaggttcaaatt
gcaggagaagcgcttgttcagtcaagtttaaaaaacctggagcgagctcaagatccgatg
actaacggtgatgtgtttgaagcagccacagagccaagcactcatgagacggagaacaca
aagaccgctcaagggtttcccgggacaggccccaaatcctctcagtacccagacgagcag
gcgctcaaagattacctgaagaggctttcggatcagactctggctgagcaagcggctaag
acgccgagtacagctccgtgtgcacagattctccctgagcctgctggtgttttcacctcg
gaccccccaacccccgtggcacagtcggtcaccccgatgggctccgccctgaacaacctg
gtggtctcgtacgcgtcggctgtaggggaacgagtcgcgtccacgtacgaggccctctct
ctgaggaaagtcatcagctactggggtccaggtgaagagagggtgcgtcaggaggagcac
aaacaaggcaagaagagctcgagtctcagcgacatccgcgaggaggaggccgagggtctg
agtcgacgcctctcgctccccggcctgctctcacagggtacatgcgctctccatatctta
taccaccacatgctgtccccacgtctcttacggagggtgaatcgcccgcgtgaccgtgcc
gttgccctcgccccggctggcgtggccgaatcagacgcccgcttgccctctctgcagacg
gaggtgtggagctggggacacggtcaagaaggacaactcggacacggagatgtcctgccc
agactgcagccgttgtgtattaagagcctgagtggtaaagaggtagtgaaagtggctgca
ggtgctcttcactcactcgccctgacggcgcagtcacaggtgtactcctggggcagtaac
agttttggtcaactggggcacatggaatcccccagcaccatccctcgtccagccaagctg
tcggaggggattcgtgtatgggacgtggcagcagggcagcatcacaccctcctactggct
gacggagattgccttcaaccaattctctactacagcggtcagcaggtgaaggagagctct
gatgagacggcccaggaggagagcggaggttacacacagcaacctgtactcctgcccttc
tgcatgaacctgggctacgtgagcagcgtgagcgcaggtggacaggtgtgtgcagcgata
gccgaccgcagcgttgtgggtttaatcgccagcctgcacgagctggcagcggccgagaga
aagttctactgcaaactgaccagcattaagaccctgctgctgcagccgctgcttaacctg
gattctttaagctctgcgctgggacccccgtgcacggggctcctccagaatctgattggc
cgatttagccgcctgtcacagctgacgggtcagaactccgcggccatgacctgcttcctg
cgtcgctcgcgtgatctcagaggcctggtgctagttgacaacgcacatctgttcctggac
acatattctgagttctgcgctgcagtgggaaacatgctggtcatgggcggctttcaggca
ctcgttaaaccttgccaggatgtgttcggaaaaggtgtggagacggtgcaaaaactgtcc
gagtgtacagaagatggcgcgatgccggccgacgttctggctcatctcttttaccttccc
gtccgtcatctgcacgagtacagccacctgctgctcaaacttgcctcctgctacgatccg
gtacatgcccctcagttctgtgcggaccatcagaagctgcaggaggcctgctccaagtac
gagtctctggctcttcatcttaagaggaagaggaaggaagcggaatatacgctgcacttc
tggaagagctttccaggaaagatgacggactctctgcggaaaccgtctcgccgcttggtg
tgtgagagcggcaacaaagccctgaccctgcagaacgccgggcgcttctcggtcaactgg
ttcatccttttcaacgacgctctcgtccacgctcagttctccactcatcacgtcttcccg
ttggcgacgctctgggtggagccgatgtcagacgagaacgctggcctgtacgggttaaag
ttgacctcacctgaggagagcttcacgctgctggcgtcctcgccatctgaaaaggcaaag
tggttgcgtgctattaaccaggctgtggagcaggcactgagtggggcggggttacacaca
gcccctcctacatccggggcggggttgagagcagacccgcccatttcccgaaccgcctcc
tacaccttctataaggacagcagggtgaaagacgcggtctacgagggacgctgggtggca
gggaagcctcacgggaggggcgtaataaaatggccagatggaaggatgtacaccgggatg
tttaagaacggactcgaggacggatttggcgactatattgttcctaacaagaaccttaac
aagaatgatcattaccagggccaatggaaagacggcaggatgcacggatttgggattttc
agatacgccacaggagaagtgtatgagggctcgtttcaggataacatgcgtcacggccat
ggcatgctgcgaagcggcaagctcaactccacgtccccgagcgtcttcatcggccagtgg
ctgaacgacaagaaaactggctacggcgtgttcgatgacatcacaagaggagagaagtac
atgggtttatggcaggatgatcagaagcagggcaacggcgtcatcgtcacacagtttggt
ctttactacgagggagctttcagggacaataaaatgatggggaccggcgttttactttca
gaagacgacaccacgttcgagggggatttctcagaagattggactctaaatggaaagggc
actctgacgatgccaaatggcgactacatcgagggttccatcagcggagtttggggaacc
ggtctgaagatttcagggtcctactacaaacccaacctgtacgacacggacaaggataag
agtcgtgcgcttaaactgggtcagttctcagtacaccccgaggacaagtggaaggcggtg
ttcggggagtgctggagccggctggggtgtgacacaccgggacagggagagaccagagcg
gcctgggacaacatcgctatagcgctgaccacgaacagaagacaacacagagacagtcct
gagctgctgagtcgttcccataataaaaccctggagagcctggagttcatccctcagcac
gacggacctgtcacgctggagaagtacgagaccatccgccgctatctcattaaggcgtgt
gacacacccctgcacccgctgggccggcttgtagagacgttggtagccgtgtaccgcatg
acgtacgtgggcgtcggagcgaaccgcaggctgctgcagcaagccgtcaacgagatcaaa
tcctacctcagccgcatctttcagatcgtcaggttcctgtttcctgatcttccggaggaa
ggcgggttgctggtcgaggctccaaacgaaaagaaggaatcgaagtcgaccagcagtgag
ctcgagtctccgaaaccagggcgtgtggtcagcagctccgccttgctcctgcccgtcttg
ctcccgcgtctctacccgcctcttttcacactctacgctctggacaaggagaaagaggac
gacgtgtactgggactgtgtgctgcgtcttaacaagcagcccgacctcgctcttctcgcc
tttctcggagtgcaacagaaattctggcccgtgactgtcacagcacatggagaaaagcaa
caggtcctgcccggcactaaagacgcctgttttgcttcagctgttgagacactgcaacaa
atcagcacaacattcactccctctgacaagctgcaggtcatccagctgaccttcgaggag
ataacccaggaagtgcttgccttacttaaacaggacttcctgtggtccatggatgatctg
tttcctgtttttctctatgtcgttctgcgtgctcgaataaggaacctggggtcagaggtc
agtctgatagaggacctcatggacccatgtgtgcagcacggagagcacggcatcatgttc
accacgttaaaggcatgttattatcaaattcagcatgagaagatcacatag

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