Clarias gariepinus (North African catfish): 128526572
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Entry
128526572 CDS
T10780
Symbol
als2b
Name
(RefSeq) alsin isoform X1
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128526572 (als2b)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
128526572 (als2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
MORN
RCC1_2
VPS9
PH
RhoGEF
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
128526572
NCBI-ProteinID:
XP_053354541
LinkDB
All DBs
Position
6:36097254..36115979
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AA seq
1696 aa
AA seq
DB search
MDKLKSLGEEKRSQERGVLHTWRGYSYSVTPEKLLLSRPVLQAALGAKHGVLLLEGGQVY
SFGELPWKQNLSSLKTTDPILEAGLSEKRVVSVAAGTSHNGAVTEDGAVHMWGDNAHGQC
GLSGLSVVPNPTPVGVMESETAPSRPVRILELACGEQHTLALSVAHEVWSWGFGCQLGLH
TASFPVWKPLKVEHLAGRHVLQVACGASHSLALVRCPSPPHDPRRPPEDKCGQCNQSLYT
MTDKEDHVIISDNHYCPLGVELDEDDNKSALEHGLVQGTPSSRGKMKISPSEPVLTTRTQ
TLRSAFSSTSSPESRDEVQIAGEALVQSSLKNLERAQDPMTNGDVFEAATEPSTHETENT
KTAQGFPGTGPKSSQYPDEQALKDYLKRLSDQTLAEQAAKTPSTAPCAQILPEPAGVFTS
DPPTPVAQSVTPMGSALNNLVVSYASAVGERVASTYEALSLRKVISYWGPGEERVRQEEH
KQGKKSSSLSDIREEEAEGLSRRLSLPGLLSQGTCALHILYHHMLSPRLLRRVNRPRDRA
VALAPAGVAESDARLPSLQTEVWSWGHGQEGQLGHGDVLPRLQPLCIKSLSGKEVVKVAA
GALHSLALTAQSQVYSWGSNSFGQLGHMESPSTIPRPAKLSEGIRVWDVAAGQHHTLLLA
DGDCLQPILYYSGQQVKESSDETAQEESGGYTQQPVLLPFCMNLGYVSSVSAGGQVCAAI
ADRSVVGLIASLHELAAAERKFYCKLTSIKTLLLQPLLNLDSLSSALGPPCTGLLQNLIG
RFSRLSQLTGQNSAAMTCFLRRSRDLRGLVLVDNAHLFLDTYSEFCAAVGNMLVMGGFQA
LVKPCQDVFGKGVETVQKLSECTEDGAMPADVLAHLFYLPVRHLHEYSHLLLKLASCYDP
VHAPQFCADHQKLQEACSKYESLALHLKRKRKEAEYTLHFWKSFPGKMTDSLRKPSRRLV
CESGNKALTLQNAGRFSVNWFILFNDALVHAQFSTHHVFPLATLWVEPMSDENAGLYGLK
LTSPEESFTLLASSPSEKAKWLRAINQAVEQALSGAGLHTAPPTSGAGLRADPPISRTAS
YTFYKDSRVKDAVYEGRWVAGKPHGRGVIKWPDGRMYTGMFKNGLEDGFGDYIVPNKNLN
KNDHYQGQWKDGRMHGFGIFRYATGEVYEGSFQDNMRHGHGMLRSGKLNSTSPSVFIGQW
LNDKKTGYGVFDDITRGEKYMGLWQDDQKQGNGVIVTQFGLYYEGAFRDNKMMGTGVLLS
EDDTTFEGDFSEDWTLNGKGTLTMPNGDYIEGSISGVWGTGLKISGSYYKPNLYDTDKDK
SRALKLGQFSVHPEDKWKAVFGECWSRLGCDTPGQGETRAAWDNIAIALTTNRRQHRDSP
ELLSRSHNKTLESLEFIPQHDGPVTLEKYETIRRYLIKACDTPLHPLGRLVETLVAVYRM
TYVGVGANRRLLQQAVNEIKSYLSRIFQIVRFLFPDLPEEGGLLVEAPNEKKESKSTSSE
LESPKPGRVVSSSALLLPVLLPRLYPPLFTLYALDKEKEDDVYWDCVLRLNKQPDLALLA
FLGVQQKFWPVTVTAHGEKQQVLPGTKDACFASAVETLQQISTTFTPSDKLQVIQLTFEE
ITQEVLALLKQDFLWSMDDLFPVFLYVVLRARIRNLGSEVSLIEDLMDPCVQHGEHGIMF
TTLKACYYQIQHEKIT
NT seq
5091 nt
NT seq
+upstream
nt +downstream
nt
atggataagctgaagagtttgggtgaggagaaacgctctcaggagcgaggagttctgcac
acatggagaggttactcctacagcgtcactccagagaaactgctcctttctcggcccgtg
cttcaggctgccctcggggctaaacacggagttctgctgttggagggtgggcaggtgtac
agttttggagaattaccatggaaacagaacctgtcgtctttgaaaacgacagaccccatt
ctggaggcggggctcagcgagaagcgcgtggtttccgtggcagcggggacctcccacaat
ggggcggtgacggaggacggagccgtgcacatgtggggggacaacgcgcacggtcagtgc
ggtctgtcaggactctcggtcgtccccaatcctacgcctgtgggcgtgatggagagtgag
accgcgccctcgagaccggtaaggattttggagttggcgtgcggtgagcagcacacgctg
gcactttcggttgcgcacgaagtgtggtcatggggctttggctgccagttggggttgcac
accgcgtcttttcctgtctggaagccgctgaaggtcgagcacctagccgggaggcatgta
ctccaggtggcgtgtggagcctcacacagtctcgcgcttgtgcgttgcccgtcccctcct
catgacccacgcagacctcccgaggacaaatgcggccagtgcaatcaatcactttacacc
atgaccgacaaggaggatcatgtcatcatctcagacaaccactactgccccctgggggtg
gaactcgatgaagacgacaacaaatctgctttggaacatggcctagttcagggtactcct
agttcgaggggcaagatgaaaatttccccatctgagccggttttaacgacacgcacccag
accctgaggtccgccttttcgtccacgtcgagccctgaatcgcgggatgaggttcaaatt
gcaggagaagcgcttgttcagtcaagtttaaaaaacctggagcgagctcaagatccgatg
actaacggtgatgtgtttgaagcagccacagagccaagcactcatgagacggagaacaca
aagaccgctcaagggtttcccgggacaggccccaaatcctctcagtacccagacgagcag
gcgctcaaagattacctgaagaggctttcggatcagactctggctgagcaagcggctaag
acgccgagtacagctccgtgtgcacagattctccctgagcctgctggtgttttcacctcg
gaccccccaacccccgtggcacagtcggtcaccccgatgggctccgccctgaacaacctg
gtggtctcgtacgcgtcggctgtaggggaacgagtcgcgtccacgtacgaggccctctct
ctgaggaaagtcatcagctactggggtccaggtgaagagagggtgcgtcaggaggagcac
aaacaaggcaagaagagctcgagtctcagcgacatccgcgaggaggaggccgagggtctg
agtcgacgcctctcgctccccggcctgctctcacagggtacatgcgctctccatatctta
taccaccacatgctgtccccacgtctcttacggagggtgaatcgcccgcgtgaccgtgcc
gttgccctcgccccggctggcgtggccgaatcagacgcccgcttgccctctctgcagacg
gaggtgtggagctggggacacggtcaagaaggacaactcggacacggagatgtcctgccc
agactgcagccgttgtgtattaagagcctgagtggtaaagaggtagtgaaagtggctgca
ggtgctcttcactcactcgccctgacggcgcagtcacaggtgtactcctggggcagtaac
agttttggtcaactggggcacatggaatcccccagcaccatccctcgtccagccaagctg
tcggaggggattcgtgtatgggacgtggcagcagggcagcatcacaccctcctactggct
gacggagattgccttcaaccaattctctactacagcggtcagcaggtgaaggagagctct
gatgagacggcccaggaggagagcggaggttacacacagcaacctgtactcctgcccttc
tgcatgaacctgggctacgtgagcagcgtgagcgcaggtggacaggtgtgtgcagcgata
gccgaccgcagcgttgtgggtttaatcgccagcctgcacgagctggcagcggccgagaga
aagttctactgcaaactgaccagcattaagaccctgctgctgcagccgctgcttaacctg
gattctttaagctctgcgctgggacccccgtgcacggggctcctccagaatctgattggc
cgatttagccgcctgtcacagctgacgggtcagaactccgcggccatgacctgcttcctg
cgtcgctcgcgtgatctcagaggcctggtgctagttgacaacgcacatctgttcctggac
acatattctgagttctgcgctgcagtgggaaacatgctggtcatgggcggctttcaggca
ctcgttaaaccttgccaggatgtgttcggaaaaggtgtggagacggtgcaaaaactgtcc
gagtgtacagaagatggcgcgatgccggccgacgttctggctcatctcttttaccttccc
gtccgtcatctgcacgagtacagccacctgctgctcaaacttgcctcctgctacgatccg
gtacatgcccctcagttctgtgcggaccatcagaagctgcaggaggcctgctccaagtac
gagtctctggctcttcatcttaagaggaagaggaaggaagcggaatatacgctgcacttc
tggaagagctttccaggaaagatgacggactctctgcggaaaccgtctcgccgcttggtg
tgtgagagcggcaacaaagccctgaccctgcagaacgccgggcgcttctcggtcaactgg
ttcatccttttcaacgacgctctcgtccacgctcagttctccactcatcacgtcttcccg
ttggcgacgctctgggtggagccgatgtcagacgagaacgctggcctgtacgggttaaag
ttgacctcacctgaggagagcttcacgctgctggcgtcctcgccatctgaaaaggcaaag
tggttgcgtgctattaaccaggctgtggagcaggcactgagtggggcggggttacacaca
gcccctcctacatccggggcggggttgagagcagacccgcccatttcccgaaccgcctcc
tacaccttctataaggacagcagggtgaaagacgcggtctacgagggacgctgggtggca
gggaagcctcacgggaggggcgtaataaaatggccagatggaaggatgtacaccgggatg
tttaagaacggactcgaggacggatttggcgactatattgttcctaacaagaaccttaac
aagaatgatcattaccagggccaatggaaagacggcaggatgcacggatttgggattttc
agatacgccacaggagaagtgtatgagggctcgtttcaggataacatgcgtcacggccat
ggcatgctgcgaagcggcaagctcaactccacgtccccgagcgtcttcatcggccagtgg
ctgaacgacaagaaaactggctacggcgtgttcgatgacatcacaagaggagagaagtac
atgggtttatggcaggatgatcagaagcagggcaacggcgtcatcgtcacacagtttggt
ctttactacgagggagctttcagggacaataaaatgatggggaccggcgttttactttca
gaagacgacaccacgttcgagggggatttctcagaagattggactctaaatggaaagggc
actctgacgatgccaaatggcgactacatcgagggttccatcagcggagtttggggaacc
ggtctgaagatttcagggtcctactacaaacccaacctgtacgacacggacaaggataag
agtcgtgcgcttaaactgggtcagttctcagtacaccccgaggacaagtggaaggcggtg
ttcggggagtgctggagccggctggggtgtgacacaccgggacagggagagaccagagcg
gcctgggacaacatcgctatagcgctgaccacgaacagaagacaacacagagacagtcct
gagctgctgagtcgttcccataataaaaccctggagagcctggagttcatccctcagcac
gacggacctgtcacgctggagaagtacgagaccatccgccgctatctcattaaggcgtgt
gacacacccctgcacccgctgggccggcttgtagagacgttggtagccgtgtaccgcatg
acgtacgtgggcgtcggagcgaaccgcaggctgctgcagcaagccgtcaacgagatcaaa
tcctacctcagccgcatctttcagatcgtcaggttcctgtttcctgatcttccggaggaa
ggcgggttgctggtcgaggctccaaacgaaaagaaggaatcgaagtcgaccagcagtgag
ctcgagtctccgaaaccagggcgtgtggtcagcagctccgccttgctcctgcccgtcttg
ctcccgcgtctctacccgcctcttttcacactctacgctctggacaaggagaaagaggac
gacgtgtactgggactgtgtgctgcgtcttaacaagcagcccgacctcgctcttctcgcc
tttctcggagtgcaacagaaattctggcccgtgactgtcacagcacatggagaaaagcaa
caggtcctgcccggcactaaagacgcctgttttgcttcagctgttgagacactgcaacaa
atcagcacaacattcactccctctgacaagctgcaggtcatccagctgaccttcgaggag
ataacccaggaagtgcttgccttacttaaacaggacttcctgtggtccatggatgatctg
tttcctgtttttctctatgtcgttctgcgtgctcgaataaggaacctggggtcagaggtc
agtctgatagaggacctcatggacccatgtgtgcagcacggagagcacggcatcatgttc
accacgttaaaggcatgttattatcaaattcagcatgagaagatcacatag
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integrated database retrieval system