Clarias gariepinus (North African catfish): 128526583
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Entry
128526583 CDS
T10780
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-3 isoform X1
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04080
Neuroactive ligand-receptor interaction
cgar04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128526583
04082 Neuroactive ligand signaling
128526583
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128526583
Ion channels [BR:
cgar04040
]
Ligand-gated channels
GABA-A
128526583
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
128526583
NCBI-ProteinID:
XP_053354559
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All DBs
Position
6:2456788..2594480
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AA seq
462 aa
AA seq
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MSGKFLLHVVLLSVLHACSQTLASEDEEYDDVTVSQMLSPKKNEMDATQILNNLLKEYDK
KLRPDIGVKPTVIDVDIFVNSIGPVSSINMEYQIDIIFAQTWTDSRLRYNSTMKILTLNS
NMVGLIWVPDTIFRNSKNADSHWITTPNQLLRIWNDGKILYTLRLTINAECQLQLHNFPM
DEHSCPLIFSSYGYPRDEMIYKWRKNSVEAADQKSWRLYQFDFMGLRNTTDVLKTTSGDY
VVMTVYFDLSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTALVSCFFSSECVCL
LLAGITTVLTMTTLSTVARTSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSYSAR
RPTCKKTKRPNYSVLDVGPPPTVIALNNSMYWQEFDDACLYECLDGKDCQSFFCCYEECK
GGAWRKGRVHIDILELDAYSRVFFPTSFLLFNVVYWVGYLYL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcaaatttctgctccatgtcgtacttctgtccgtgttgcatgcatgttcccaa
accctggcatctgaagacgaggagtacgacgacgtgaccgtcagtcaaatgctgtcgccg
aaaaagaacgagatggacgccactcagatcctgaacaacctcctgaaggagtacgataag
aagctccgccccgacatcggagttaaaccgactgtcatcgacgtcgatatcttcgttaac
agcatcggacccgtctcatcaataaatatggagtatcagatcgacatcatctttgctcag
acatggacagacagtcggctcagatacaacagcaccatgaagatattaacgttaaacagt
aacatggtggggctgatctgggtcccggacactatttttagaaactccaagaacgcagac
tcacactggattaccacacccaatcagctactcaggatatggaatgatgggaaaatactg
tacactctcagactgactataaacgctgagtgtcagctgcagctccacaacttccccatg
gatgaacactcctgcccactcatcttctccagctatggctacccgcgagatgaaatgatc
tacaagtggaggaagaactctgtggaagcggctgaccagaagtcctggagactttatcag
tttgacttcatgggactgaggaacaccacggatgtcctcaagaccacctcaggtgactat
gtggtgatgacggtttattttgatctgagcagaaggatgggctacttcaccatccagacc
tacatcccctgcatcctcaccgtcgtcctctcatgggtctccttctggattaaaaaagac
gcaacaccagccaggactgctttagtaagctgttttttctcatctgaatgtgtttgtctt
ttactggcaggaataaccacggtgttgaccatgaccacactgagcactgtggccaggacg
tcgttacccagagtctcatacgtcacagccatggacctctttgtgaccgtctgtttcctg
tttgtcttcgcggccctcatggagtacgccacgctcaactactactcgtacagtgctcgc
aggccgacctgtaaaaagacgaaaagaccgaactactcagtgctggatgtgggacctcct
cctacagtcatcgctctgaacaactccatgtactggcaagaatttgatgacgcctgtcta
tacgagtgcttggatggaaaagactgccagagcttcttctgctgctacgaggaatgcaaa
ggaggagcctggagaaagggcagagtccacatagatattttggaactggacgcatactca
cgcgtcttcttccccacctccttcttgttgtttaatgtcgtctactgggtaggctacctc
tatctttag
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